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GO:0006366: transcription by RNA polymerase II (Biological process)

"The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs)." [GOC:jl, GOC:txnOH, ISBN:0321000382]


There are 6478 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_6262 Sugarcane pan-transcriptome v1 66.67 % 1e-06 8e-06
Cluster_585 Sugarcane pan-transcriptome v1 4.08 % 0.000199 0.001625
Cluster_881 Sugarcane pan-transcriptome v1 1.69 % 0.024157 0.048949
Cluster_11660 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.005063
Cluster_269 Sugarcane pan-transcriptome v1 1.8 % 5.1e-05 0.00234
Cluster_1358 Sugarcane pan-transcriptome v1 100.0 % 0.0 9e-06
Cluster_7996 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.006076
Cluster_909 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.01081
Cluster_6498 Sugarcane pan-transcriptome v1 100.0 % 0.0 3e-06
Cluster_10998 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.009735
Cluster_8063 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.008182
Cluster_2603 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.010907
Cluster_511 Sugarcane pan-transcriptome v1 1.74 % 0.001087 0.005317
Cluster_553 Sugarcane pan-transcriptome v1 1.44 % 9.9e-05 0.001311
Cluster_646 Sugarcane pan-transcriptome v1 2.25 % 0.000654 0.001976
Cluster_723 Sugarcane pan-transcriptome v1 1.99 % 3.8e-05 0.000882
Cluster_216 Sugarcane pan-transcriptome v1 3.33 % 0.000298 0.010188
Cluster_931 Sugarcane pan-transcriptome v1 6.25 % 0.006609 0.039308
Cluster_122 Sugarcane pan-transcriptome v1 1.04 % 0.003007 0.009261
Cluster_2580 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.014755
Cluster_98 Setaria viridis 1.45 % 0.014311 0.039565
Cluster_489 Setaria viridis 50.0 % 0.000417 0.00793
Cluster_316 Setaria viridis 50.0 % 0.000417 0.017528
Cluster_261 Oryza sativa 0.65 % 0.018003 0.044673
Cluster_238 Oryza sativa 1.18 % 0.010034 0.044961
Cluster_435 Oryza sativa 50.0 % 0.000237 0.007229
Cluster_237 Oryza sativa 50.0 % 0.000237 0.004345
Cluster_104 Setaria italica 2.53 % 0.000143 0.022376
Cluster_290 Sorghum bicolor 2.13 % 0.008235 0.029674
Cluster_227 Sorghum bicolor 0.89 % 0.000638 0.012837
Cluster_1620 Sugarcane pan-transcriptome v1 3.28 % 0.000308 0.003432
Cluster_7625 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.043084
Cluster_3258 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.028579
Cluster_4928 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.012923
Cluster_6033 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.008285
Cluster_4038 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.009735
Cluster_5871 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.013464
Cluster_4900 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.013464
Cluster_8820 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.04557
Cluster_9572 Sugarcane pan-transcriptome v1 33.33 % 0.001243 0.010717
Cluster_1654 Sugarcane pan-transcriptome v1 1.05 % 0.002947 0.020868
Cluster_4571 Sugarcane pan-transcriptome v1 1.36 % 0.000115 0.014794
Cluster_9748 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.013464
Cluster_9366 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.0145
Cluster_8200 Sugarcane pan-transcriptome v1 50.0 % 0.000829 0.004971
Cluster_4288 Sugarcane pan-transcriptome v1 3.28 % 0.000308 0.01632
Cluster_337 Zea mays 50.0 % 0.000405 0.009316
Cluster_194 Zea mays 1.85 % 0.010886 0.037781
Cluster_241 Zea mays 1.37 % 0.014692 0.043177
Sequences (6478) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !