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  3. GO:0009982

GO:0009982: pseudouridine synthase activity (Molecular function)

"Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5." [GOC:mah]


There are 7954 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_7128 Sugarcane pan-transcriptome v1 100.0 % 0.0 0.0
Cluster_4493 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.012655
Cluster_5305 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.018299
Cluster_612 Sugarcane pan-transcriptome v1 1.98 % 0.00143 0.015586
Cluster_442 Sugarcane pan-transcriptome v1 2.0 % 0.001402 0.021287
Cluster_16 Sugarcane pan-transcriptome v1 1.05 % 0.004975 0.015591
Cluster_6701 Sugarcane pan-transcriptome v1 100.0 % 0.0 1e-05
Cluster_809 Sugarcane pan-transcriptome v1 1.56 % 0.034134 0.049531
Cluster_8165 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.011025
Cluster_798 Sugarcane pan-transcriptome v1 4.62 % 7e-06 0.00037
Cluster_7904 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.01844
Cluster_10408 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.015547
Cluster_788 Sugarcane pan-transcriptome v1 2.27 % 0.001089 0.009034
Cluster_7900 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.016266
Cluster_304 Setaria viridis 50.0 % 0.001043 0.02921
Cluster_598 Setaria viridis 50.0 % 0.001043 0.02921
Cluster_27 Setaria viridis 0.97 % 0.005123 0.017786
Cluster_7 Setaria viridis 0.9 % 0.005922 0.025158
Cluster_158 Setaria viridis 50.0 % 0.001043 0.013562
Cluster_126 Setaria viridis 2.13 % 0.024244 0.049991
Cluster_156 Brachypodium distachyon 2.44 % 0.001164 0.007313
Cluster_106 Brachypodium distachyon 2.0 % 0.001724 0.015556
Cluster_128 Brachypodium distachyon 1.0 % 0.00668 0.044436
Cluster_167 Oryza sativa 2.5 % 0.0008 0.002457
Cluster_350 Oryza sativa 2.94 % 0.000579 0.006581
Cluster_276 Oryza sativa 2.25 % 0.000989 0.0043
Cluster_17 Oryza sativa 1.57 % 0.000132 0.00122
Cluster_249 Sorghum bicolor 3.33 % 0.000566 0.016762
Cluster_300 Sorghum bicolor 1.59 % 0.00246 0.033351
Cluster_3645 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.015547
Cluster_5578 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.01844
Cluster_6002 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.01369
Cluster_5756 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.028465
Cluster_3052 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.01844
Cluster_6522 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.018706
Cluster_4685 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.037964
Cluster_7072 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.03688
Cluster_8180 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.011928
Cluster_9419 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.012655
Cluster_8527 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.029287
Cluster_10141 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.011932
Cluster_10261 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.01844
Cluster_9404 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.009979
Cluster_6280 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.036598
Cluster_7350 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.015547
Cluster_5534 Sugarcane pan-transcriptome v1 33.33 % 0.001627 0.012471
Cluster_9769 Sugarcane pan-transcriptome v1 50.0 % 0.001085 0.003701
Cluster_165 Zea mays 1.08 % 0.007091 0.026881
Cluster_11 Zea mays 1.8 % 0.002624 0.033782
Cluster_494 Zea mays 33.33 % 0.002049 0.019811
Cluster_4 Zea mays 1.27 % 0.000561 0.004993
Cluster_7 Zea mays 1.09 % 0.007017 0.039803
Cluster_215 Zea mays 2.13 % 0.001892 0.047933
Cluster_565 Zea mays 50.0 % 0.001367 0.036901
Sequences (7954) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !