Heatmap: Cluster_505 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Svant1-2 mutant (Liu et al., 2020)	Svant1-1 mutant (Liu et al., 2020)	wild-type (Liu et al., 2020)	Svant1-3 mutant (Liu et al., 2020)	sparse panicle mutant - 14 DAS (Zhu et al., 2022)	sparse panicle mutant - 12 DAS (Zhu et al., 2022)	sparse panicle mutant - 10 DAS (Zhu et al., 2022)	wild type - 14 DAS (Zhu et al., 2022)	wild type - 12 DAS (Zhu et al., 2022)	wild type - 10 DAS (Zhu et al., 2022)	2h after light-dark (Huang et al., 2017)	4h after light-dark (Huang et al., 2017)	6h after light-dark (Huang et al., 2017)	8h after light-dark (Huang et al., 2017)	10h after light-dark (Huang et al., 2017)	12h after light-dark (Huang et al., 2017)	14h after light-dark (Huang et al., 2017)	16h after light-dark (Huang et al., 2017)	18h after light-dark (Huang et al., 2017)	20h after light-dark (Huang et al., 2017)	22h after light-dark (Huang et al., 2017)	24h after light-dark (Huang et al., 2017)	26h after light-dark (Huang et al., 2017)	28h after light-dark (Huang et al., 2017)	30h after light-dark (Huang et al., 2017)	32h after light-dark (Huang et al., 2017)	34h after light-dark (Huang et al., 2017)	36h after light-dark (Huang et al., 2017)	38h after light-dark (Huang et al., 2017)	40h after light-dark (Huang et al., 2017)	42h after light-dark (Huang et al., 2017)	44h after light-dark (Huang et al., 2017)	46h after light-dark (Huang et al., 2017)	48h after light-dark (Huang et al., 2017)	2h after hot-cold (Huang et al., 2017)	4h after hot-cold (Huang et al., 2017)	6h after hot-cold (Huang et al., 2017)	8h after hot-cold (Huang et al., 2017)	10h after hot-cold (Huang et al., 2017)	12h after hot-cold (Huang et al., 2017)	14h after hot-cold (Huang et al., 2017)	16h after hot-cold (Huang et al., 2017)	18h after hot-cold (Huang et al., 2017)	20h after hot-cold (Huang et al., 2017)	22h after hot-cold (Huang et al., 2017)	24h after hot-cold (Huang et al., 2017)	26h after hot-cold (Huang et al., 2017)	28h after hot-cold (Huang et al., 2017)	30h after hot-cold (Huang et al., 2017)	32h after hot-cold (Huang et al., 2017)	34h after hot-cold (Huang et al., 2017)	36h after hot-cold (Huang et al., 2017)	38h after hot-cold (Huang et al., 2017)	40h after hot-cold (Huang et al., 2017)	42h after hot-cold (Huang et al., 2017)	44h after hot-cold (Huang et al., 2017)	46h after hot-cold (Huang et al., 2017)	48h after hot-cold (Huang et al., 2017)	10 DAS (Zhu et al., 2018)	12 DAS (Zhu et al., 2018)	14 DAS (Zhu et al., 2018)	Segment 1 (Studer et al., 2016)	Segment 2 (Studer et al., 2016)	Segment 3 (Studer et al., 2016)	Segment 4 (Studer et al., 2016)	15_DAS (Zhu et al., 2018)	16_DAS (Zhu et al., 2018)	18_DAS (Zhu et al., 2018)	Control 0h (Anderson et al., 2021)	Control 1h (Anderson et al., 2021)	High Light 1h (Anderson et al., 2021)	High Temperature 1h (Anderson et al., 2021)	Control 2h (Anderson et al., 2021)	High Light 2h (Anderson et al., 2021)	High Temperature 2h (Anderson et al., 2021)	Control 4h (Anderson et al., 2021)	High Light 4h (Anderson et al., 2021)	High Temperature 4h (Anderson et al., 2021)
Sevir.1G150800.1	0.34	0.38	0.24	0.46	0.25	0.11	-0.02	0.26	-0.06	-0.01	0.33	-0.23	0.31	-0.3	0.09	-0.14	0.03	-0.09	0.36	0.16	-0.27	0.16	0.17	-0.45	-0.61	-0.39	-0.78	-0.33	0.14	-1.5	0.35	-0.52	-0.78	-0.34	-0.0	-0.39	-0.35	-0.15	0.53	0.51	0.86	0.02	0.63	0.16	0.26	0.16	-0.14	0.77	-0.23	0.54	0.71	-0.34	-0.57	0.03	-0.45	0.32	0.49	0.65	0.06	0.23	0.2	0.92	1.03	-0.07	-0.51	0.54	0.52	0.74	-1.67	-2.25	-1.94	-2.63	-1.43	-1.72	-1.38	-2.51	-1.41	-1.38
Sevir.2G380700.1	-0.02	-0.12	0.08	0.16	0.57	0.25	-0.15	0.79	0.58	0.18	-0.25	0.38	-0.09	-0.26	0.13	0.27	-0.82	-0.56	-0.49	-0.7	-0.52	-0.01	0.06	0.14	-0.23	-0.31	-0.21	-0.17	-0.52	-1.54	-0.22	-0.39	-0.74	-0.33	0.3	0.31	-0.14	-0.32	-0.45	-0.02	-0.08	0.53	0.93	0.44	0.63	0.35	0.1	1.03	0.47	0.54	0.65	0.08	0.01	-0.11	0.16	0.66	0.83	-0.28	-0.17	0.58	0.64	-0.4	-0.14	-0.55	-0.82	0.6	0.54	0.5	-3.04	-2.13	-1.11	-3.12	-1.31	-1.02	-0.55	-0.9	-1.04	-0.08
Sevir.3G267200.1	0.47	0.15	0.03	0.49	0.24	0.13	-0.21	0.42	0.41	0.27	0.11	-0.0	-0.26	-0.45	-0.77	0.11	0.35	0.4	0.39	0.4	-0.5	0.23	-0.31	-0.44	-0.66	-0.76	-1.16	-0.66	-0.26	-0.69	-0.01	0.12	-0.46	-0.41	-0.27	0.16	-0.34	-0.7	-0.67	-0.87	-0.49	0.37	0.84	0.59	0.77	0.47	0.52	0.88	-0.26	0.44	0.92	-0.18	-0.01	-0.66	-0.7	0.28	0.44	-0.8	-0.08	0.32	0.01	-0.28	-0.3	1.07	1.31	-0.8	-0.33	-0.15	-0.07	-0.36	-0.7	-0.44	-0.69	-1.27	-0.09	-1.26	-0.52	-1.35
Sevir.8G034900.1	0.51	0.4	0.33	0.21	0.65	0.35	0.25	0.68	0.42	0.33	-0.14	-0.47	-0.2	-0.35	0.18	0.0	-0.06	-0.15	0.36	-0.38	-0.75	-0.52	-0.01	-0.77	-1.25	-1.1	-0.41	-0.26	-0.44	-0.58	0.01	0.07	-0.44	-0.52	-0.79	-0.94	-0.7	-0.73	-0.17	0.25	0.54	0.35	0.84	0.82	0.96	0.74	0.21	1.02	-0.01	0.57	1.07	0.29	-0.23	-0.17	-0.74	0.08	0.6	0.18	0.4	0.41	0.38	0.42	0.4	0.23	-0.31	0.1	0.57	0.3	-0.78	-1.74	-3.62	-1.94	-0.91	-3.07	-0.7	-2.61	-2.91	-0.93
Sevir.9G145100.1	0.28	0.08	-0.01	0.21	0.39	0.47	0.2	0.54	0.26	0.35	0.33	-0.17	0.13	-0.38	-0.05	0.18	-0.76	0.07	0.18	-0.17	-0.32	0.26	0.24	-0.55	-0.83	-0.59	-0.59	-0.01	-0.72	-1.32	0.04	-0.08	-1.09	-0.55	0.16	-0.19	-0.28	-0.27	-0.26	0.03	0.09	0.03	0.95	0.4	0.87	0.39	0.42	1.3	-0.36	0.72	1.0	-0.36	-0.74	-0.04	-0.82	0.59	1.14	0.33	0.06	0.4	0.53	-0.3	0.49	0.27	-0.57	0.67	0.67	-0.02	-1.36	-3.82	-1.78	-2.5	-1.13	-1.5	-2.06	-1.25	-2.27	-1.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.