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Heatmap: Cluster_248 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-0.08 -0.21 0.75 0.24 -1.36 -1.28 0.22 0.21 0.25 0.02
-0.27 -0.19 0.46 0.34 -0.79 -0.78 0.18 0.16 0.3 0.03
-0.26 -0.04 0.46 0.42 -0.77 -0.88 0.07 0.18 0.13 0.1
-0.11 -0.05 0.4 0.28 -0.7 -0.77 0.2 0.07 0.13 0.11
-0.27 -0.16 0.42 0.4 -0.51 -0.4 0.13 0.2 -0.05 -0.04
-0.02 -0.1 0.56 0.27 -0.93 -0.8 -0.13 0.23 0.08 0.22
-0.46 -0.48 1.01 0.67 -1.28 -1.9 0.25 0.22 -0.18 0.05
-0.32 -0.24 0.81 0.52 -1.09 -1.27 -0.17 0.03 0.11 0.38
-0.28 -0.15 0.73 0.34 -0.94 -1.01 0.46 0.04 -0.05 -0.06
-0.27 -0.05 1.11 0.56 -2.47 -2.64 0.37 -0.19 0.0 0.08
-0.98 -1.53 1.21 0.68 - - 1.2 -0.75 0.16 0.28
-0.27 -0.07 0.71 0.58 -1.5 -1.58 -0.05 0.29 0.12 0.17
-0.12 -0.11 0.46 0.11 -0.89 -0.96 0.23 0.12 0.19 0.31
0.01 0.05 0.5 0.09 -0.73 -0.99 0.06 -0.01 0.27 0.18
-0.31 -0.46 0.55 0.3 -0.55 -0.76 0.06 0.09 0.23 0.29
-0.36 -0.19 0.58 0.51 -1.12 -1.02 0.01 0.13 0.25 0.26
-0.35 -0.2 0.91 0.67 -1.72 -1.63 0.1 0.09 -0.22 0.33
-0.26 -0.33 0.65 0.43 -1.35 -1.44 0.08 0.13 0.32 0.37
-0.15 -0.34 0.64 0.36 -0.84 -1.22 0.41 0.2 0.08 -0.07
-0.15 -0.17 0.49 0.02 -0.95 -1.05 0.21 0.11 0.36 0.34
-0.3 -0.19 0.47 0.29 -0.83 -0.84 0.23 0.19 0.14 0.21
-0.2 -0.23 0.62 0.47 -0.66 -0.92 -0.07 0.21 0.12 -0.0
-0.14 -0.04 0.52 0.39 -1.1 -1.07 0.1 0.16 0.23 0.08
0.0 -0.25 0.72 0.5 -1.54 -1.56 -0.11 0.04 0.24 0.35
-0.26 -0.28 0.7 0.64 -0.98 -1.21 0.01 0.08 0.19 0.03
-0.02 0.06 0.71 0.12 -1.19 -1.07 -0.09 0.05 0.23 0.24
-0.48 -0.13 0.64 0.35 -1.03 -0.91 0.29 0.2 0.18 0.02
-0.39 -0.67 0.86 0.17 -1.69 -1.61 0.43 0.24 0.23 0.42
-0.05 -0.07 0.52 0.04 -0.86 -0.89 -0.02 0.24 0.26 0.21
-0.02 -0.06 0.43 0.67 -1.21 -1.28 0.33 0.13 -0.0 -0.11
-0.13 0.08 0.49 0.43 -1.19 -1.13 0.27 -0.05 0.19 0.1
-0.23 -0.18 0.87 0.39 -1.89 -1.7 0.21 0.14 0.21 0.19
-0.41 -0.28 0.63 0.7 -0.91 -1.21 -0.09 0.23 0.16 0.08
-0.17 -0.13 0.25 0.2 -0.16 -0.26 0.22 0.02 -0.01 -0.07
-0.28 -0.23 0.82 0.56 -1.53 -1.63 0.02 0.17 0.23 0.13
-0.76 -1.01 1.18 0.6 -2.41 -3.24 0.77 0.22 0.19 -0.28
-0.23 -0.12 0.42 0.25 -0.41 -0.66 0.31 0.07 0.14 -0.12
-0.14 0.11 0.44 0.44 -1.26 -1.44 0.26 0.08 0.27 0.09
-0.07 -0.18 0.28 0.21 -0.41 -0.43 0.25 0.01 0.13 0.01
-0.19 -0.12 0.73 0.15 -1.15 -1.14 0.24 0.2 0.23 0.05
-0.03 0.02 0.53 0.15 -1.03 -0.96 0.06 0.03 0.26 0.24
-0.44 -0.38 0.56 0.32 -0.8 -0.76 0.23 0.2 0.24 0.15
-0.29 -0.17 1.05 0.38 -1.93 -2.17 0.42 -0.22 0.14 0.18
-0.38 -0.27 0.59 0.41 -0.91 -1.11 0.2 0.41 0.2 -0.1
-0.27 -0.13 0.67 0.2 -1.02 -1.27 0.11 0.16 0.26 0.28
-0.16 -0.18 0.94 0.31 -1.61 -1.82 0.35 0.26 -0.04 0.03
-0.28 -0.28 0.56 0.34 -0.98 -1.12 0.4 0.25 0.26 -0.1
-0.54 -0.45 0.73 0.31 -0.66 -0.68 0.1 0.26 0.18 0.03
-0.27 -0.17 0.44 0.29 -0.58 -0.56 0.42 0.11 -0.06 -0.03
-0.03 -0.29 0.62 0.57 -1.18 -1.3 -0.01 0.07 0.11 0.28
-2.02 -1.54 1.33 0.67 -3.99 -3.82 0.72 0.28 0.14 0.28
-0.15 -0.17 0.39 0.37 -0.65 -0.73 0.07 0.11 0.03 0.29
-0.26 -0.2 0.5 0.41 -0.82 -0.76 0.09 0.19 0.1 0.16
0.08 0.11 0.44 -0.0 -1.03 -0.83 -0.11 0.2 0.38 0.12
-0.44 -0.38 0.59 0.18 -0.44 -0.57 -0.01 0.19 0.21 0.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.