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Heatmap: Cluster_286 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-3.65 -3.59 0.42 -0.92 1.09 1.14 0.87 -0.22 -0.52 -2.0
- -2.42 -0.02 -0.66 0.97 0.83 0.1 -0.05 0.71 -0.37
-1.37 -1.17 -1.13 0.08 0.7 0.25 0.36 0.3 0.2 0.24
-2.26 -3.12 -0.34 -1.03 1.16 1.08 1.12 -0.17 -0.4 -2.15
-5.22 -5.39 -0.36 -1.6 0.18 1.0 1.24 0.71 0.32 -1.15
-0.35 -0.13 -0.02 0.36 0.23 0.38 -0.15 -0.04 0.01 -0.57
- - 0.55 -2.03 0.74 0.36 1.35 0.8 -0.38 -1.87
-0.18 -0.25 -0.04 -0.15 0.09 0.23 0.18 0.1 0.02 -0.09
-0.82 -0.99 -0.42 -2.04 0.8 1.17 -0.15 0.36 0.5 -1.51
-0.86 -0.96 -0.5 0.05 0.5 0.09 -0.01 0.39 0.29 0.24
-0.43 -0.22 -0.09 0.06 0.23 0.23 -0.0 0.14 0.16 -0.23
- - 0.53 -2.12 1.25 0.81 1.18 -0.06 -0.51 -1.92
-0.36 -1.25 0.37 -0.87 0.99 0.45 0.63 -0.57 -0.43 -0.63
- - -0.74 -0.5 1.24 0.35 0.51 0.89 0.17 -0.6
- - -0.19 -1.3 0.67 0.76 1.33 0.6 0.08 -1.58
-6.08 -6.25 1.03 -2.51 0.48 0.72 0.69 0.55 0.37 -1.52
-5.49 -6.66 0.34 -1.48 1.12 1.0 0.76 0.53 -0.42 -1.87
-3.06 -2.88 -2.04 -0.24 0.98 0.94 0.53 0.84 0.09 -1.12
-1.77 -1.72 -0.71 0.05 0.95 0.44 0.25 0.14 0.17 0.08
-1.16 -1.1 -0.24 -0.57 0.7 0.43 0.33 0.45 0.23 -0.31
-1.36 -1.13 -0.05 -0.38 0.46 0.3 0.51 0.39 0.52 -0.62
- - -1.36 -0.94 1.66 0.63 0.08 0.63 0.32 -0.91
- - 0.83 -1.6 0.99 0.62 0.97 0.18 -0.02 -1.76
- - 0.41 -1.83 1.01 0.88 1.36 -0.01 -0.56 -1.75
- - -2.23 -1.62 1.41 0.98 0.7 0.82 0.05 -1.32
-1.11 -2.34 -0.68 -0.85 0.71 0.51 0.99 0.64 0.15 -1.17
-1.49 -1.46 -0.61 -0.06 0.96 0.19 0.1 0.44 0.22 -0.04
- - 0.96 -0.79 0.28 0.83 1.13 0.02 -0.48 -0.82
-3.32 -3.49 -0.88 -0.66 0.71 1.25 1.0 0.38 0.06 -1.84
-7.26 - 1.16 -0.97 0.42 0.46 0.91 0.18 0.28 -1.69
- - 0.19 -2.33 1.27 0.69 0.68 0.73 0.18 -1.95
-1.12 -1.7 0.46 -2.45 0.69 1.26 -0.45 0.38 0.29 -1.33
-8.05 - -0.37 -0.57 0.92 0.33 1.03 0.62 0.14 -0.49
-0.71 -0.22 0.39 -0.58 0.72 0.62 0.25 -0.06 -0.54 -0.92
-0.83 -1.16 -0.9 -0.71 0.81 0.84 0.44 0.19 0.29 -0.77
-10.95 -11.11 -1.01 -0.48 1.55 0.81 0.95 -0.34 0.03 -1.49
-0.33 -0.3 0.15 -0.35 0.13 0.22 0.29 0.05 0.16 -0.19
-2.65 -3.7 0.97 -1.82 0.96 0.61 0.76 -0.29 0.01 -0.95
-0.46 -0.63 -0.36 0.1 0.38 0.2 0.04 0.25 0.02 0.12
-0.3 -0.35 0.07 -0.17 0.24 0.02 0.2 0.03 0.21 -0.07
-1.19 -1.09 0.44 -1.91 0.78 1.06 0.16 0.47 -0.44 -1.2
-0.89 -0.71 -0.3 -0.32 0.58 0.6 0.56 -0.21 0.16 -0.37
-0.14 -0.1 -0.06 0.2 0.19 0.13 0.04 0.05 -0.15 -0.24
-1.65 -1.56 0.15 -2.86 0.79 0.37 0.9 0.74 -0.13 -0.68
-0.87 -0.88 0.25 -1.62 0.52 0.81 -0.4 0.36 0.48 -0.4
- -1.8 0.35 0.51 1.99 0.02 0.71 - -1.32 -
-7.5 -9.66 1.14 -2.3 1.08 1.12 0.02 0.35 -0.67 -1.41
-1.02 -0.76 0.27 -0.25 0.74 0.38 0.26 0.13 0.01 -0.74
-2.73 -2.69 0.2 -1.47 0.43 0.94 -0.4 0.8 0.45 0.07
-1.23 -1.24 -0.85 -0.64 0.87 1.1 0.52 0.11 -0.06 -0.97
-0.65 -1.02 0.41 -1.52 0.58 0.86 -0.68 0.58 0.1 -0.52
0.37 -1.7 0.52 -0.52 0.76 0.58 0.42 -0.63 -0.2 -2.08
- - -0.43 0.03 1.52 0.64 1.05 -0.3 -0.86 -1.45
-0.44 -0.22 0.17 -0.33 0.59 0.5 0.38 0.04 -0.4 -1.07
-1.79 -1.75 0.54 -0.98 1.12 0.85 0.2 0.06 -0.09 -1.48
-0.84 -0.69 0.52 - 0.26 1.52 - 0.24 0.06 0.14
-1.54 -1.47 -0.59 0.06 0.7 0.22 0.36 0.27 0.21 0.2
-0.26 -0.41 -0.07 -0.16 0.09 0.43 0.13 0.1 0.13 -0.15
-2.37 -2.84 -1.01 -0.16 1.13 0.52 0.55 0.21 -0.02 0.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.