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Heatmap: Cluster_107 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
- - - - - - - 0.29 1.16 2.71
-0.66 -0.8 0.35 0.58 -0.46 -0.97 0.4 0.37 0.16 0.07
-0.58 -0.29 0.07 0.17 -0.63 -0.34 0.22 0.44 0.04 0.44
- - -2.45 1.45 0.66 -0.6 0.3 -0.98 0.27 0.94
-0.43 -0.49 0.15 0.46 0.01 -0.53 -0.24 0.05 0.33 0.3
- - - - 0.1 -0.32 -0.13 1.01 1.43 1.32
-0.11 0.46 -1.32 -1.2 -0.56 -1.25 -0.0 0.78 0.84 0.32
- - -0.1 - -0.01 - - 1.65 1.47 1.12
-0.41 -0.08 -0.55 0.24 -0.24 -0.35 0.21 0.41 0.25 0.17
-1.57 - 1.33 1.54 - - - -0.09 0.34 1.03
- -3.43 -0.37 -1.17 - -1.43 -0.32 1.46 0.96 1.5
-3.31 -2.47 0.45 0.1 -2.84 -2.23 -1.96 1.1 1.1 1.25
-2.16 - -0.79 1.37 - - 0.77 -0.66 1.33 0.81
-3.28 -3.45 0.58 -0.02 -1.62 -2.0 1.0 0.92 0.54 0.49
- - -1.8 -1.63 -1.78 - - 0.56 1.06 2.47
- - - - - - - - 1.96 2.61
- -5.85 -2.37 -3.63 - -2.63 -1.88 1.3 1.61 1.91
-0.83 -0.9 0.51 -0.2 -0.76 -1.21 -0.34 0.74 0.81 0.45
- - 2.54 - - - - - - 2.07
- - 0.4 1.08 -3.01 - -0.05 0.51 1.18 0.85
-1.36 -2.53 0.15 1.33 -0.28 - -0.01 -0.28 0.54 0.79
- - - - - - 0.42 -0.44 1.71 2.22
- -0.59 - - - -1.11 - 0.63 1.48 2.18
0.11 -0.01 -0.52 -3.55 -3.04 -3.23 0.7 0.96 1.28 -0.11
- -1.54 - - 1.49 -1.24 - 1.7 1.26 -0.39
-5.08 -6.32 -0.24 0.21 -2.34 -1.23 -0.04 0.93 1.23 1.07
- - 1.5 -0.65 -0.81 - - 1.21 1.03 0.69
-0.48 -0.02 0.32 -1.62 -0.59 -0.86 0.38 0.11 1.11 -0.04
-1.86 -2.78 -1.21 -0.22 -3.78 -2.6 -0.45 1.46 1.24 1.13
- - -0.0 1.09 -3.15 -3.54 0.72 0.96 0.02 1.05
- - -2.72 0.25 - - 0.2 1.36 0.88 1.64
-1.35 -1.28 0.36 -0.15 -0.73 -0.6 0.29 0.14 0.45 1.04
0.38 0.13 -1.9 -2.83 -1.71 -2.38 0.7 0.66 1.04 0.51
-0.27 -0.21 -0.4 -0.92 -2.17 -1.49 0.67 0.43 1.27 0.12
-0.21 -0.11 -0.34 0.11 -0.23 -0.22 0.09 0.31 0.27 0.15
2.27 1.11 - - - - - - 1.59 -
0.1 0.53 - -0.3 - - 0.97 0.59 0.93 0.38
-0.72 0.8 -3.32 0.06 -1.36 - 0.61 0.31 0.96 0.48
0.66 0.49 - - - - 0.42 -0.42 0.39 1.85
0.12 -1.46 - -2.13 - - -1.52 1.79 1.53 0.7
0.04 0.02 -2.35 -3.2 -4.05 -4.08 0.29 1.32 1.05 0.8
- -5.38 -0.16 0.44 -3.45 -4.56 0.27 1.14 1.02 1.11
-0.48 -1.17 0.8 0.37 -1.2 -1.05 -0.29 0.65 0.47 0.16
- -1.01 0.59 0.41 -2.18 -1.25 0.5 0.66 -0.01 1.03
-1.46 -2.25 -0.95 -3.66 -2.88 -0.47 -0.12 0.74 0.97 1.77
-0.69 -0.55 0.37 -0.6 -0.55 -0.56 0.28 0.67 0.36 0.38
-0.25 -0.22 -0.03 0.04 -0.32 -0.44 0.02 0.35 0.19 0.41
- - 0.23 0.68 - - 0.34 0.71 -1.28 1.97
-2.58 -0.75 -0.74 1.0 -2.15 -2.53 -0.1 0.81 0.74 0.92
-0.35 -0.72 -0.13 0.09 -1.05 -1.54 -0.02 0.85 0.74 0.43
-0.18 -0.64 0.82 0.78 -1.4 -0.32 -2.21 0.32 -0.0 0.43
-0.6 -0.77 -1.7 -1.53 - - 0.58 1.5 1.32 0.38
-0.2 -0.19 -0.02 -0.76 -0.67 -0.51 0.35 0.53 0.66 0.07
-0.83 -0.79 0.12 0.81 -0.3 -1.12 -2.18 0.49 0.77 0.49
-0.96 -1.71 -0.07 -0.67 - -2.45 0.39 1.54 0.59 0.76
- - -0.42 0.38 - - -0.95 0.75 1.82 1.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.