Heatmap: Cluster_276 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	sid-dev (Zhang et al., 2022)	wt-dev (Zhang et al., 2022)	untreated (Thomas et al., 2018)	treated - synthetic auxin (Thomas et al., 2018)	untreated (Wang et al., 2019)	mowed (Wang et al., 2019)	time point 1 (Ogden et al., 2020)	time point 2 (Ogden et al., 2020)	time point 3 (Ogden et al., 2020)	time point 4 (Ogden et al., 2020)
Bradi1g00642.3	-1.63	-1.49	-1.24	1.71	-0.3	-1.15	0.05	0.38	0.21	-0.22
Bradi1g04683.2	-0.31	-0.26	0.53	0.63	-0.14	-0.54	0.23	-0.23	-0.16	-0.22
Bradi1g11080.1	0.0	-0.17	0.23	0.73	-0.26	-0.17	-0.58	-0.5	0.04	0.2
Bradi1g22690.5	-1.71	-1.82	-0.19	1.89	-1.09	-1.39	-0.16	-0.22	0.41	-0.16
Bradi1g23640.4	-0.7	-0.5	-0.31	1.3	-0.53	-0.3	-0.57	-0.11	0.15	0.25
Bradi1g28380.2	-0.52	-0.5	0.08	1.03	-0.79	-0.28	0.07	0.08	-0.32	0.23
Bradi1g43840.1	-0.32	-0.51	0.1	1.08	-0.87	-0.8	-0.09	-0.09	0.22	0.21
Bradi1g46602.15	-1.11	-0.86	-0.63	1.78	-1.83	-1.95	0.04	-0.16	0.21	0.34
Bradi1g57240.1	-	-	-0.3	2.15	-0.91	-0.72	-0.48	-0.6	-0.1	0.37
Bradi1g60550.1	-0.57	-0.46	-1.02	1.27	-0.75	-0.66	-0.1	0.22	-0.29	0.63
Bradi1g64580.1	-0.38	-0.34	-0.06	0.84	-0.02	-0.59	-0.02	0.04	0.05	-0.01
Bradi1g64957.1	-	-	-	2.5	-	-	-	1.37	-	0.82
Bradi1g73090.1	-	-	-3.37	2.44	-1.46	-2.87	-	1.06	0.11	-0.32
Bradi1g77040.1	-2.14	-2.92	0.73	1.57	-0.57	-0.8	-0.95	0.42	-0.3	0.12
Bradi2g05620.1	-0.35	-0.67	-0.43	1.17	-0.26	-0.61	-0.31	-0.04	-0.03	0.42
Bradi2g05870.1	-1.42	-1.05	0.26	1.38	-0.54	-0.52	0.36	-0.36	-0.58	0.31
Bradi2g08890.3	-0.62	-0.61	0.08	1.23	-0.67	-0.66	-0.15	-0.01	-0.06	0.24
Bradi2g14820.2	-0.92	-0.97	-0.87	1.52	-0.22	-0.7	0.18	-0.16	-0.05	0.12
Bradi2g16337.6	-0.42	-0.39	0.21	0.91	-0.74	-0.69	-0.09	0.06	-0.01	0.35
Bradi2g22440.1	-	-	-2.0	2.61	-3.17	-2.69	-0.98	-0.49	0.22	0.02
Bradi2g24930.1	-1.34	-1.28	0.35	1.53	-1.26	-1.04	-0.35	0.09	-0.06	0.39
Bradi2g26265.1	-0.63	-0.4	0.32	1.44	-2.07	-1.84	-0.03	-0.3	-0.08	0.47
Bradi2g32277.2	-0.94	-0.31	0.25	1.24	-0.85	-0.89	0.09	-0.19	-0.06	0.16
Bradi2g32705.1	-	-	0.81	2.44	-3.54	-2.84	-0.98	-2.92	-0.2	0.11
Bradi2g33200.2	-2.36	-1.99	-0.98	2.36	-2.26	-4.15	-1.15	-0.8	0.11	0.62
Bradi2g42641.2	-	-1.64	0.52	2.09	-1.02	-1.4	-	0.07	-0.08	0.16
Bradi2g47030.2	-	-5.59	0.44	1.57	-1.77	0.02	-0.76	0.63	-0.58	0.64
Bradi2g48250.1	-1.32	-1.29	0.08	1.35	-0.29	-0.54	0.01	-0.01	-0.04	0.14
Bradi2g53425.1	-0.73	-0.69	1.02	1.8	-0.64	-1.48	-1.38	-2.23	-1.56	0.42
Bradi2g54100.3	-0.16	-0.19	0.11	1.06	-0.3	-0.56	-1.3	-0.37	-0.03	0.5
Bradi2g55901.1	-0.92	-1.67	1.3	1.5	-	-2.36	-	-0.01	0.14	0.66
Bradi2g56310.1	-0.12	-0.18	-0.02	0.74	-0.25	-0.27	-0.16	-0.04	-0.09	0.08
Bradi2g57190.6	0.1	0.08	-0.22	0.88	-0.59	-0.43	-0.23	-0.09	-0.2	0.14
Bradi2g59360.1	-1.19	-1.1	-0.02	1.07	-0.34	-0.61	0.3	0.08	0.1	0.25
Bradi3g03020.2	-0.86	-0.71	-0.07	1.29	-0.28	-0.73	-0.11	-0.15	-0.04	0.28
Bradi3g15601.1	-1.39	-1.08	-0.08	1.67	-0.91	-2.3	-2.21	-1.47	0.47	1.21
Bradi3g16060.1	-5.3	-5.2	0.87	1.92	-0.58	-0.97	-0.89	-0.3	-0.39	0.05
Bradi3g18850.1	-0.73	-0.5	-0.19	1.46	-0.61	-0.64	-0.57	-0.23	-0.08	0.37
Bradi3g21580.1	-3.21	-2.84	0.53	1.78	-0.97	-0.89	-0.5	-0.14	0.12	0.15
Bradi3g26221.1	-	-	0.88	1.68	-	-	0.42	-0.45	0.38	0.66
Bradi3g30230.1	-0.76	-0.64	-0.65	1.29	-0.27	-0.49	0.19	-0.18	-0.05	0.19
Bradi3g32060.1	-3.72	-3.89	0.75	1.83	-1.61	-1.85	-1.37	-0.27	0.25	0.69
Bradi3g34890.4	-2.21	-2.03	0.45	1.8	-0.87	-0.96	-0.86	-0.26	-0.53	0.63
Bradi3g36780.1	0.18	-0.37	0.49	1.79	-1.24	-1.12	-1.55	-0.8	-0.54	-0.44
Bradi3g37216.5	-5.5	-4.08	-0.7	1.47	-1.75	-1.64	0.09	0.62	-0.04	1.23
Bradi3g38514.1	-2.46	-1.43	0.51	1.91	-1.4	-1.27	-0.92	-0.25	-0.71	0.58
Bradi3g56740.1	-1.3	-1.18	-0.03	1.21	-0.61	-0.75	0.18	-0.05	0.02	0.58
Bradi3g58900.1	-3.88	-6.37	-0.42	1.63	-0.83	-1.28	0.31	0.07	-0.09	0.9
Bradi4g05062.2	0.16	0.33	0.45	1.8	-2.06	-	-1.47	-0.36	-0.92	-0.22
Bradi4g05760.1	-2.91	-1.49	0.98	1.82	-0.83	-0.64	0.24	-0.83	-1.59	-0.47
Bradi4g14170.1	-0.6	-0.42	0.12	0.69	-0.79	-0.38	0.37	-0.12	0.02	0.4
Bradi4g21950.6	-1.54	-1.38	0.24	1.37	-1.43	-1.31	0.15	0.09	0.14	0.54
Bradi4g24390.1	-1.02	-0.81	-0.21	1.5	-0.23	-0.69	0.03	-0.13	0.03	-0.31
Bradi4g30480.1	-2.06	-2.02	-0.7	1.55	-0.35	-0.69	0.12	0.22	0.19	0.22
Bradi4g31120.2	-0.12	-0.13	0.11	0.83	-0.07	-0.24	-1.14	-0.03	0.16	-0.07
Bradi4g31250.1	-1.11	-1.19	-0.17	0.83	-0.49	-0.39	0.21	0.19	0.25	0.56
Bradi4g31480.1	-1.01	-0.98	0.16	1.56	-0.6	-0.89	-0.32	-0.45	-0.09	0.33
Bradi4g33200.1	-2.67	-2.01	-0.1	1.5	-0.42	-0.77	0.15	0.01	0.43	0.04
Bradi4g36800.1	-0.4	-0.05	0.25	0.85	-0.13	-0.11	-0.25	-0.48	-0.42	0.19
Bradi4g40725.1	-8.33	-	0.3	2.22	-2.27	-2.13	-0.42	-0.72	0.06	0.35
Bradi4g40731.1	-8.42	-7.0	0.61	2.21	-2.73	-2.63	-0.56	-0.47	-0.05	0.22
Bradi4g41190.1	-	-	-2.34	1.63	-3.29	-2.67	0.19	0.57	0.48	1.27
Bradi4g41377.1	-0.42	-0.23	0.34	1.3	-0.2	-0.16	-1.09	-0.93	0.02	-0.16
Bradi4g44370.2	-	-	-0.36	2.45	-3.97	-3.13	-4.68	0.56	0.38	-0.38
Bradi5g17240.1	-1.35	-1.46	-0.12	1.02	-0.16	-0.65	0.18	0.21	0.05	0.53
Bradi5g20150.1	-0.7	-0.42	-0.39	1.05	-0.41	-0.42	0.03	-0.03	0.3	0.11
Bradi5g20910.1	-1.78	-2.63	0.24	1.64	-3.52	-1.97	-0.45	0.16	0.12	0.98
Bradi5g22220.3	-0.47	-0.44	0.15	0.99	-0.29	-0.27	-0.9	-0.38	-0.19	0.69
Bradi5g23260.1	-5.88	-5.28	-0.9	2.13	-1.71	-1.45	-0.02	-0.03	0.35	0.19
Bradi5g25580.1	-2.06	-0.86	-0.48	1.8	-0.93	-1.63	-0.52	-0.55	0.71	0.18
Bradi5g27057.1	-	-	-0.31	2.12	-3.44	-	0.25	-0.08	-0.77	1.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.