Heatmap: Cluster_258 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
- -7.64 - -4.45 - -9.35 -1.89 0.52 -2.46 3.01
-5.94 -7.11 -5.88 -2.52 -7.16 -7.15 -2.33 0.61 -2.64 2.98
- -6.06 -1.11 -1.36 - -5.8 -2.54 0.25 -1.57 2.89
- - - -3.55 - - -3.49 0.66 -3.3 3.03
-9.21 -9.38 -9.84 -1.3 -7.7 -5.96 -1.37 0.81 -2.26 2.85
-3.08 -4.84 - - -4.24 - -0.74 -1.85 -2.77 3.13
-0.61 -0.62 -1.06 -0.52 -0.77 -1.1 -0.28 0.26 -0.78 1.95
- - -2.74 -2.13 - -6.09 -1.39 0.31 -2.85 2.97
- - - - - -2.51 - 0.35 - 3.1
- - -5.28 -3.29 -2.97 -2.6 -1.75 1.17 -0.83 2.7
- -9.25 - -4.87 - - -2.37 0.59 -2.25 3.01
- - - -3.66 - -8.47 -1.79 0.52 -2.27 3.0
-2.96 -2.8 -1.37 -0.82 -0.24 -0.28 -2.22 0.79 -1.02 2.22
-5.75 -4.04 -10.05 -3.03 -5.86 -5.66 -1.82 0.56 -2.61 2.97
-6.5 -4.67 -7.94 -2.02 -4.07 -3.13 -1.04 0.71 -2.4 2.85
- - -5.36 -1.11 - -6.72 -0.93 1.05 -1.39 2.71
-4.4 -1.99 -3.96 0.67 -3.93 -3.32 -3.06 -0.88 -0.18 2.66
-10.53 -7.89 -6.62 0.09 -2.24 -3.14 -1.51 0.57 -2.0 2.7
-9.17 - -7.4 -1.88 - -8.5 -2.33 0.03 -1.94 3.04
-10.9 - -2.2 -1.36 -1.51 0.23 -0.81 1.06 -1.27 2.26
- - -5.36 -4.17 - -6.86 -2.85 0.17 -1.73 3.06
-6.8 -5.6 -5.18 -1.71 -6.37 -7.07 -2.08 -0.3 -2.19 3.06
-4.25 -4.42 - -2.63 - -2.58 - 0.06 0.24 2.88
- - -4.62 -5.44 -4.6 -3.67 -4.74 -0.49 -2.96 3.16
- -4.24 -1.43 -0.65 -1.52 -2.93 - -0.58 -2.17 2.92
-5.83 -5.48 -6.21 -0.67 -3.47 -3.91 -1.43 0.72 -2.01 2.79
-1.46 -1.26 -4.02 -0.7 -4.39 -3.78 -0.88 1.03 -1.09 2.42
-4.33 -4.49 - -0.65 -1.76 -3.17 - 1.25 -1.2 2.6
- -7.22 - -4.78 - - -0.95 -1.27 0.02 3.0
-4.14 -4.31 -1.35 -2.5 -2.49 -4.05 -3.21 0.68 -2.82 2.85
-10.6 -6.79 -7.77 -1.0 -11.1 -6.69 -1.64 1.04 -2.18 2.78
-0.22 -0.2 -3.69 -2.53 -1.66 -4.04 - -0.62 - 2.81
-3.01 -4.77 -3.18 -4.01 -4.14 -4.52 0.45 -0.93 -1.96 2.89
-3.67 -3.73 -6.26 -2.01 -6.87 -6.26 -0.74 1.14 -2.08 2.7
- - - -2.5 -4.13 -3.89 -1.56 0.74 -1.85 2.89
-6.12 -6.71 -7.71 -2.42 -4.34 -4.73 -1.08 1.3 -3.28 2.74
-8.78 - -8.2 -3.73 - -8.66 -1.65 0.93 -2.54 2.91
- -10.96 - -3.68 - -9.64 -2.29 0.11 -2.78 3.09
-1.98 -2.15 - -2.34 - - -0.05 0.84 -3.66 2.7
-6.7 -6.55 - -2.03 - -7.6 -1.07 0.83 -1.87 2.85
-3.27 -2.59 -6.27 -1.62 - - -0.7 0.44 -2.14 2.85
- -0.99 - -0.09 - - 0.53 -1.33 - 2.75
-5.44 - - -0.72 - -3.76 -0.77 0.58 -2.8 2.82
- -8.92 - -4.94 -8.21 - -2.54 0.07 -2.56 3.1
- - - - - - -0.99 1.09 -3.61 2.87
- -6.97 - -1.79 - - -2.45 0.4 -2.35 3.0
- - - - - - - 0.11 -1.65 3.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.