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Heatmap: Cluster_231 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
1.13 1.17 -1.95 -0.13 -3.71 -4.2 0.4 -0.12 0.04 -0.01
0.68 0.67 -0.57 -0.06 -0.68 -0.99 0.41 -0.1 -0.04 -0.32
0.83 0.92 -0.75 -0.3 -0.51 -1.12 0.4 -0.06 -0.16 -0.77
0.72 0.77 -0.4 -0.28 -0.63 -0.55 0.52 -0.37 -0.03 -0.87
1.06 0.97 -1.77 -0.47 -3.47 -3.72 0.76 0.47 0.16 -0.78
1.32 1.28 -0.95 -1.28 -0.98 -1.83 0.43 -0.83 -0.12 -0.87
1.05 0.96 -0.22 -0.04 -1.9 -2.05 0.05 0.07 -0.41 -0.32
0.98 1.0 -2.16 -0.84 -2.19 -2.41 0.68 0.19 0.05 0.07
0.58 0.65 -0.51 -0.29 -0.36 -0.89 0.47 -0.03 -0.0 -0.45
0.96 1.01 -1.35 -0.12 -0.59 -0.86 0.23 -0.29 -0.2 -0.62
0.65 0.6 -0.56 -0.15 -0.69 -0.76 0.38 -0.14 -0.02 -0.09
0.64 0.49 -0.22 -0.08 -0.27 -0.47 0.32 -0.26 -0.3 -0.34
0.58 0.62 -1.5 0.13 -1.79 -2.15 0.67 0.53 0.23 -0.36
0.8 0.66 -0.77 -0.34 -0.24 -0.56 0.1 -0.13 -0.11 -0.21
0.95 0.93 -0.67 -0.29 -1.48 -1.59 0.22 0.14 -0.01 -0.37
1.27 0.82 -1.45 -0.44 -1.53 -1.78 0.24 -0.11 0.07 -0.11
1.01 1.16 -2.52 -0.85 -3.19 -3.85 0.72 -0.02 0.1 0.18
1.08 1.14 -1.84 -0.55 -1.73 -1.28 0.09 -0.11 0.23 -0.23
0.64 0.8 -0.76 -0.15 -1.58 -2.0 0.47 0.2 0.27 -0.16
1.3 1.2 -1.46 -0.04 -2.28 -2.99 0.2 -0.23 -0.06 -0.72
1.01 1.23 -2.24 -1.31 -3.35 -4.32 0.5 0.1 0.09 0.41
0.94 0.79 -0.79 -0.19 -0.77 -0.96 0.29 -0.28 -0.06 -0.36
0.76 0.61 -0.2 -0.2 -0.52 -0.71 0.08 -0.19 -0.33 -0.0
1.29 1.08 -1.3 -0.22 -1.4 -1.8 0.25 -0.12 -0.22 -0.86
0.8 0.75 -0.65 -0.01 -1.11 -1.38 0.1 0.11 -0.08 -0.01
1.0 1.07 -1.64 -0.47 -2.22 -3.23 0.3 0.04 0.34 0.01
1.0 0.99 -1.86 -0.13 -2.26 -3.38 0.33 0.15 0.15 0.07
0.87 1.03 -1.4 0.02 -1.72 -1.77 0.28 -0.25 0.08 0.03
1.62 1.65 -2.54 -1.88 -3.47 -3.43 0.53 -0.58 -0.41 -1.77
0.9 0.93 -1.14 -0.53 -1.11 -1.45 0.55 -0.13 0.06 -0.28
1.09 1.29 -0.82 0.28 -0.84 -1.18 0.03 -0.61 -0.68 -1.58
0.99 1.03 -1.48 -0.05 -1.12 -1.25 0.15 -0.23 0.19 -0.57
0.82 0.7 -0.43 -0.67 -0.6 -1.03 0.12 0.04 0.18 -0.24
1.0 1.04 -2.15 0.16 -3.11 -2.76 0.23 -0.02 0.12 0.13
1.05 1.02 -1.41 -0.3 -2.51 -3.23 0.07 0.14 0.31 0.07
1.03 1.3 -2.33 -0.8 -3.85 -3.59 0.62 0.0 0.09 -0.04
0.99 1.19 -2.22 -0.04 -2.14 -2.56 0.44 -0.2 0.15 -0.3
1.03 1.07 -1.4 -0.15 -1.77 -1.76 0.47 0.03 -0.14 -0.55
0.83 0.85 -0.88 -0.41 -1.07 -1.39 0.36 0.07 0.09 -0.22
0.92 1.11 -1.9 -0.49 -3.75 -4.54 0.6 -0.08 0.15 0.34
0.67 0.75 -1.51 -0.01 -0.99 -1.35 0.48 0.13 0.2 -0.27
1.08 1.13 -2.56 -0.71 -2.36 -2.88 0.41 0.07 0.21 0.08
1.7 1.46 -2.34 -2.41 -3.08 -2.78 0.77 -0.45 -0.59 -2.13
0.87 0.81 -0.63 -0.55 -1.0 -1.24 0.31 -0.11 0.05 -0.06
0.38 0.73 -0.98 -0.23 -0.61 -1.01 0.23 0.27 0.17 0.03
0.64 0.58 -0.36 -0.41 -0.05 -0.63 -0.06 -0.12 0.03 -0.15
1.01 0.84 -0.89 0.01 -1.57 -1.78 0.11 -0.06 0.06 -0.08
1.17 1.15 -2.89 -1.28 -3.54 -4.45 0.69 -0.01 0.11 0.21
0.81 0.82 -0.55 -0.22 -0.76 -1.39 0.11 -0.05 -0.01 -0.11
0.97 1.09 -2.12 -0.25 -2.23 -2.64 0.4 -0.11 0.26 0.05
0.89 1.22 -1.19 -0.25 -3.15 -4.27 0.59 -0.09 0.32 -0.53
0.57 0.69 -0.25 -0.12 -0.32 -0.43 0.12 -0.25 -0.13 -0.4
1.16 1.15 -0.63 0.15 -1.18 -0.85 0.2 -0.68 -1.03 -0.92
0.78 0.82 -0.6 -0.52 -0.81 -1.11 0.2 -0.02 0.09 -0.1
1.41 1.27 -1.07 -1.05 -1.92 -1.78 0.4 -0.28 -0.28 -1.18
0.95 1.12 -1.92 -0.21 -2.76 -3.73 0.45 -0.15 -0.03 0.36
0.97 0.96 -1.16 -0.18 -1.02 -1.39 0.38 -0.13 -0.04 -0.51
0.61 0.47 -0.33 0.03 -0.2 -0.46 0.1 -0.2 -0.16 -0.24
0.71 0.66 -0.48 -0.15 -0.28 -0.61 0.17 -0.19 -0.17 -0.31
0.89 0.87 -1.07 -0.79 -0.78 -1.03 0.37 0.09 0.03 -0.31
0.75 1.05 -2.3 -0.06 -2.04 -2.41 0.31 0.06 0.17 0.32
0.68 0.97 -1.29 0.19 -2.04 -2.81 0.52 0.4 -0.13 -0.26
0.66 0.64 -0.78 -0.07 -0.78 -1.17 0.64 -0.03 -0.04 -0.33
1.13 1.02 -1.76 -0.88 -4.0 -4.49 0.68 0.07 0.12 0.13
1.04 1.19 -1.57 -0.17 -1.75 -2.22 0.35 -0.27 -0.03 -0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.