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Heatmap: Cluster_271 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
1.42 1.07 -1.26 0.07 0.19 -0.05 -0.68 -1.88 -1.29 -1.53
0.95 0.79 -0.92 0.86 0.68 0.43 -1.53 -2.08 -2.3 -1.98
0.66 0.64 -0.0 0.09 0.46 0.48 -0.78 -0.94 -1.15 -1.05
0.54 0.57 0.08 0.05 0.13 0.05 -0.24 -0.66 -0.6 -0.52
0.98 1.03 -0.24 -0.09 0.34 0.67 -1.45 -1.61 -1.67 -1.55
1.24 1.15 -0.79 -1.08 -0.19 1.01 -1.03 -0.93 -1.44 -3.22
0.75 0.73 -0.02 -0.09 0.42 0.14 -0.63 -0.51 -0.86 -1.32
0.77 0.67 -0.06 -0.54 0.33 0.55 -0.88 -0.72 -0.93 -0.63
0.95 0.97 -0.72 -0.19 0.91 0.93 -2.37 -2.48 -2.33 -1.89
0.65 0.7 -0.3 0.23 0.23 0.21 -0.68 -0.54 -0.75 -0.74
0.89 1.05 -0.11 -0.52 0.27 0.75 -0.52 -1.52 -1.36 -2.99
0.98 1.23 -0.63 0.2 0.54 0.02 -0.82 -2.12 -2.03 -1.39
1.58 1.34 -3.45 -1.71 0.64 0.92 -2.03 -2.87 -2.47 -3.82
0.47 0.56 0.34 0.33 0.39 0.27 -1.4 -0.62 -0.78 -1.05
0.13 0.09 0.17 -0.13 0.35 0.44 -0.67 -0.11 -0.4 -0.22
0.48 0.47 0.06 -0.08 0.3 0.27 -0.4 -0.51 -0.47 -0.69
0.64 0.58 -0.32 0.1 0.14 0.09 -0.4 -0.54 -0.46 -0.44
0.74 0.72 -0.77 0.15 0.13 0.16 -0.11 -0.8 -0.66 -0.63
1.98 1.08 -5.81 -4.65 0.49 1.14 -4.84 -2.88 -3.87 -4.63
1.04 1.02 -2.3 0.45 0.4 0.01 -0.88 -0.77 -1.13 -1.18
0.76 0.6 0.13 0.02 0.28 0.58 -1.67 -1.22 -0.85 -0.58
0.06 -0.03 0.72 0.08 0.64 0.36 -0.99 -0.28 -0.62 -1.17
1.38 0.9 -1.79 -0.89 0.4 0.48 -1.38 -1.35 -0.6 -0.86
0.89 0.97 -0.41 -1.24 0.55 0.98 -1.16 -1.37 -1.28 -1.54
0.89 0.77 -0.0 -0.07 0.43 0.35 -1.6 -1.0 -1.08 -0.83
0.33 0.34 -0.12 0.03 0.35 0.05 -0.32 -0.17 -0.33 -0.42
0.89 0.86 -0.35 -0.33 0.51 0.69 -1.72 -1.3 -1.21 -0.83
0.75 0.81 -0.44 -0.03 0.08 0.35 -0.83 -0.65 -0.72 -0.48
0.78 0.67 -0.14 0.16 0.56 0.68 -1.43 -1.46 -1.33 -1.1
1.72 1.69 -3.57 -3.08 -0.33 1.3 - - - -6.03
1.0 1.07 -0.16 -0.9 0.5 0.89 -2.01 -1.74 -1.77 -1.48
1.08 1.0 -0.18 -1.02 0.81 0.96 -1.99 -2.11 -2.81 -2.51
0.95 0.8 -0.29 -0.6 0.14 0.74 -1.2 -0.86 -0.59 -1.19
0.69 0.75 -0.28 -0.23 0.5 0.59 -1.64 -0.9 -0.74 -0.62
0.88 0.67 -0.63 -1.17 0.42 0.7 -0.79 -0.73 -0.39 -0.81
0.99 1.07 -1.96 -0.67 -0.38 0.77 -0.2 -0.54 -0.9 -1.11
0.44 0.37 -0.0 -0.06 0.36 0.31 -0.31 -0.49 -0.51 -0.62
0.67 0.63 -0.12 -0.12 0.13 0.26 -0.73 -0.46 -0.48 -0.53
1.01 0.92 -0.19 -0.72 0.41 0.53 -1.67 -1.05 -0.96 -0.97
0.98 0.98 -0.41 -0.64 0.54 0.46 -0.81 -1.25 -1.01 -1.56
1.09 1.13 -1.07 0.11 0.9 0.5 - -0.53 - -2.63
0.83 1.02 0.02 -1.29 0.29 0.85 -1.49 -1.32 -0.65 -1.5
1.02 1.0 -0.3 -0.41 0.16 0.54 -0.98 -0.91 -1.19 -1.45
1.54 1.29 -1.21 -0.47 -0.21 1.05 -2.22 -2.33 -3.09 -5.75
0.71 0.82 -0.07 -0.56 0.37 0.49 -0.89 -0.56 -0.84 -1.03
1.48 1.59 -2.66 -3.45 0.01 0.83 -0.84 -2.3 -1.87 -2.82
0.57 0.55 -0.33 -0.11 0.19 0.11 -0.38 -0.12 -0.36 -0.62
0.88 0.84 -0.33 -0.98 0.41 0.61 -0.68 -0.88 -0.86 -1.03
0.89 1.09 0.68 0.3 0.21 0.22 - - -1.25 -1.2
0.27 0.28 -0.01 0.02 0.18 0.23 -0.25 -0.36 -0.36 -0.21
1.03 1.23 -0.02 -0.98 0.26 0.5 -1.53 -0.94 -1.55 -1.76
1.39 1.08 0.33 0.54 -0.73 0.35 - - -1.46 -1.72
0.54 0.61 -0.17 -0.54 0.55 0.37 -0.56 -0.46 -0.75 -0.54
0.74 0.71 0.33 -0.35 0.14 0.47 -1.79 -1.04 -0.93 -0.21
0.73 0.77 -0.14 -0.94 0.12 0.73 -1.15 -0.6 -0.92 -0.27
1.19 1.17 0.43 0.2 0.36 0.64 - -4.52 -4.7 -4.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.