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Heatmap: Cluster_134 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
1.12 1.04 -1.53 -1.75 -0.51 -0.89 0.18 -0.06 0.04 -0.35
0.62 0.7 -1.01 -0.27 -0.29 -0.53 0.31 0.0 -0.08 -0.29
1.22 1.22 -1.71 -1.0 -0.78 -1.27 0.2 -0.19 -0.3 -0.51
1.39 1.6 -2.29 -0.99 -1.74 -1.99 0.23 -0.4 -0.74 -0.81
0.98 0.94 -0.9 -0.61 -0.63 -0.39 0.23 -0.15 -0.41 -0.55
1.44 2.08 -3.04 -0.78 -3.12 -3.75 -1.3 -0.52 -1.18 -0.65
1.2 1.22 -3.51 -0.61 -1.5 -1.7 0.7 -0.03 -0.54 -0.57
1.42 1.68 -2.9 -0.42 -2.17 -2.28 0.09 -0.41 -0.61 -1.58
0.92 0.9 -1.08 -0.26 -1.03 -0.95 0.33 0.0 -0.09 -0.46
1.17 1.25 -1.93 -0.96 -2.59 -3.68 0.62 0.01 0.21 -0.61
1.05 0.96 -1.32 -0.75 -0.94 -1.2 0.25 0.13 -0.3 -0.09
0.89 0.89 -1.37 -0.51 -0.86 -1.37 0.44 0.05 0.03 -0.24
1.19 1.23 -1.26 -0.42 -0.98 -1.46 0.22 -0.34 -0.38 -0.74
0.87 0.81 -1.2 -0.31 -0.77 -1.09 0.43 0.03 -0.18 -0.2
1.63 1.79 -4.15 -1.95 -2.0 -2.91 0.12 -0.73 -0.75 -1.13
0.92 0.82 -1.05 -0.34 -0.66 -1.15 0.39 -0.03 -0.09 -0.4
1.9 1.78 -3.85 -2.15 -2.16 -2.79 -0.09 -0.99 -1.21 -1.84
1.52 1.85 -2.38 -1.61 -5.35 -5.42 -0.02 -0.04 -0.96 -0.99
1.52 1.77 -2.7 -0.89 -3.36 -2.6 -0.19 -0.71 -0.51 -0.8
1.74 1.8 -3.7 0.2 -2.82 -3.53 -0.87 -1.12 -1.36 -1.64
0.93 0.89 -1.21 -0.43 -0.51 -0.89 0.4 -0.16 -0.19 -0.45
1.12 1.37 -1.17 0.31 -0.89 -1.24 -0.43 -0.78 -0.7 -0.61
0.68 0.97 -0.21 -0.24 -0.54 -0.45 0.08 -0.3 -0.41 -0.55
1.62 1.46 -3.13 -0.28 -2.39 -2.78 -0.25 -0.03 -0.56 -1.26
1.6 1.55 -3.47 -1.39 -2.58 -2.0 0.91 -0.94 -1.18 -1.66
0.9 1.64 -1.7 -0.47 -1.5 -1.12 0.06 -0.1 -0.65 -0.84
1.25 1.16 -2.3 -1.03 -1.36 -1.97 0.6 -0.06 0.17 -1.17
1.36 1.71 -0.76 -0.0 -3.04 -3.69 -1.16 0.17 -0.77 -2.21
1.71 1.75 -3.13 -2.02 -4.68 -4.22 0.11 -0.33 -0.48 -1.71
1.47 1.4 -2.22 -1.58 -2.75 -3.05 0.18 0.03 -0.58 -0.08
0.9 0.78 -0.91 -0.36 -0.23 -0.39 0.17 -0.31 -0.31 -0.43
1.41 1.23 -0.78 -0.77 -0.75 -1.37 -0.23 -0.74 -0.53 -0.51
1.03 1.01 -1.78 -1.01 -0.94 -1.14 0.55 -0.14 0.07 -0.41
0.84 0.78 -0.93 -0.52 -0.44 -0.98 0.4 -0.01 -0.13 -0.32
1.29 1.36 -1.85 0.33 -1.56 -1.72 -0.36 -0.53 -0.59 -0.58
1.06 0.97 -1.83 -1.08 -0.44 -0.79 0.31 -0.01 -0.14 -0.42
1.15 1.13 -0.98 -0.33 -0.98 -1.47 -0.11 -0.16 -0.25 -0.4
1.35 1.29 -1.97 -1.58 -1.59 -2.36 0.33 0.02 -0.25 -0.38
1.18 1.18 -1.11 -0.5 -0.67 -1.08 -0.05 -0.38 -0.34 -0.56
1.36 1.39 -1.92 -1.1 -1.14 -1.65 0.11 -0.27 -0.45 -0.57
0.64 0.67 -0.54 -0.36 -0.53 -1.0 0.4 -0.01 0.05 -0.27
1.44 1.71 - -1.67 - -3.54 0.72 -0.04 -0.4 -2.07
1.49 1.56 -1.51 -0.08 -3.4 -3.91 -0.07 -0.74 -0.46 -1.03
1.11 1.1 -1.32 -0.36 -0.55 -1.16 -0.06 -0.34 -0.2 -0.41
1.31 1.54 -3.65 -1.89 -1.87 -2.26 0.75 -0.21 -0.34 -1.22
1.36 1.24 -2.42 -0.76 -2.2 -2.08 0.35 0.08 -0.44 -0.4
1.25 1.19 -3.17 -0.37 -1.63 -1.5 0.39 -0.04 -0.18 -0.69
1.59 1.43 -2.83 -1.94 -2.44 -2.37 0.69 -0.43 -0.37 -1.33
1.05 1.47 -3.16 -0.66 -0.71 -1.09 0.31 -0.23 -0.42 -0.99
1.77 2.2 -3.21 -2.78 -4.33 -4.57 -0.67 -1.3 -1.26 -2.4
1.47 1.66 -2.89 -2.23 -3.78 -3.61 0.63 -0.17 -0.36 -1.56
1.09 1.08 -1.34 -0.63 -1.38 -1.24 0.5 -0.19 -0.29 -0.34
1.84 1.64 -1.21 -2.04 -2.2 -3.59 0.47 -1.6 -1.37 -2.12
1.55 1.49 -2.49 0.05 -3.32 -3.84 -0.44 -0.68 -0.58 -0.24
0.86 0.87 -0.61 -0.48 -0.52 -0.71 0.11 -0.11 -0.12 -0.41
1.57 1.48 -1.17 -1.16 -1.28 -1.57 -0.52 -0.52 -0.5 -0.99
1.2 0.95 -1.49 -0.51 -0.88 -1.64 0.12 0.01 0.01 -0.42
1.49 1.46 -2.58 -1.54 -3.45 -3.62 0.39 -0.18 -0.28 -0.45
1.21 1.21 -2.05 -1.12 -0.82 -1.36 0.27 -0.14 -0.18 -0.48
1.66 2.01 -3.14 -0.79 -3.06 -3.33 -0.41 -1.02 -1.2 -2.23
1.45 1.42 -1.22 -1.03 -1.69 -1.65 -0.19 0.09 -0.9 -0.8
0.94 1.03 -0.98 -0.48 -0.43 -0.74 0.23 -0.31 -0.33 -0.52
0.96 0.83 -1.39 -0.19 -0.61 -1.27 0.21 -0.08 -0.06 -0.18
1.13 1.03 -0.51 0.08 -0.95 -1.5 -0.17 -0.39 -0.41 -0.44
1.35 1.44 -2.44 -0.49 -1.27 -2.04 -0.04 -0.4 -0.46 -0.5
0.96 0.8 -0.91 -0.97 -0.42 -0.74 0.15 0.03 -0.11 -0.19
1.09 1.4 -1.75 -1.18 -1.2 -0.95 0.32 -0.17 -0.36 -0.67
1.49 2.22 -3.06 -1.48 - -5.0 -0.73 -0.99 -1.17 -1.1
1.31 1.2 -0.79 -0.61 -0.53 -0.69 -0.44 -0.75 -0.44 -0.7
1.4 1.15 -2.54 -0.19 -1.68 -2.28 0.28 -0.25 -0.2 -0.59
1.47 1.43 -1.5 -0.73 -1.35 -1.31 -0.18 -0.25 -0.58 -1.39
1.1 1.37 -1.68 -0.77 -0.63 -0.97 0.74 -0.4 -0.84 -2.09
1.01 1.07 -1.43 -0.7 -0.66 -1.28 0.39 -0.11 -0.13 -0.49
1.3 1.19 -3.01 -0.73 -2.01 -1.63 0.29 0.11 -0.32 -0.24
0.64 0.63 -0.69 -0.22 -0.3 -0.44 0.21 -0.06 -0.18 -0.22
1.43 1.56 -1.59 -0.0 -2.74 -3.35 -0.02 -0.93 -0.59 -0.72
1.48 1.55 -2.5 -0.79 -2.54 -2.63 -0.39 -0.27 -0.05 -0.66
0.84 0.77 -1.07 -0.1 -0.74 -1.05 0.27 -0.02 -0.12 -0.15
1.11 1.37 -3.08 -1.18 -0.99 -1.72 0.64 -0.13 -0.0 -1.21
1.71 1.94 -3.86 -0.94 -4.59 -4.38 -1.06 -0.62 -1.34 -0.54
1.53 1.72 -2.4 -0.43 -3.29 -3.67 -0.13 -0.61 -0.63 -1.04
1.11 0.92 -1.81 -0.74 -0.89 -0.58 0.52 -0.05 -0.29 -0.62
1.68 2.1 -4.1 -1.67 -5.37 -4.44 -0.78 -1.33 -1.26 -0.54
1.54 1.51 -1.7 -0.36 -4.54 -4.34 0.04 -0.4 -0.67 -0.6
1.59 1.71 -1.9 0.35 -3.41 -3.87 -1.01 -0.56 -1.24 -1.3
1.45 1.59 -2.42 -0.42 -1.18 -1.27 0.28 -0.98 -0.78 -2.78
1.4 2.04 -2.28 -4.92 -4.67 -4.25 0.41 -0.33 -0.74 -2.22
1.73 1.98 -2.91 -1.75 -2.86 - -0.97 -1.82 -1.0 -0.17
1.33 1.87 -2.73 -2.2 -1.63 -1.35 0.12 -0.37 -0.57 -2.14
1.39 1.54 -1.7 -1.17 -0.87 -1.05 -0.06 -0.16 -1.28 -1.25
1.75 2.16 -2.62 -3.19 -5.92 -4.72 -0.52 -1.57 -1.55 -1.13
0.76 0.81 -0.95 -0.49 -0.38 -1.11 0.43 -0.02 -0.08 -0.29
1.4 1.6 -1.15 -1.19 -1.78 -1.13 0.18 -1.02 -0.83 -0.98
0.66 0.69 -0.45 -0.27 -0.38 -0.37 0.1 -0.04 -0.08 -0.49
0.75 0.84 -1.06 -0.52 -0.52 -0.98 0.5 0.02 -0.1 -0.33
0.91 0.91 -1.13 -0.49 -1.07 -1.51 0.51 0.02 -0.04 -0.26
1.07 1.16 -1.5 -0.4 -0.71 -0.72 0.07 -0.43 -0.35 -0.41
0.77 0.99 -0.62 -0.11 -0.55 -0.94 0.23 -0.24 -0.11 -0.76
1.84 1.78 -2.66 -1.08 -4.56 -3.74 -0.67 -0.58 -1.02 -1.12
1.22 1.37 -1.72 -0.37 -0.61 -1.03 -0.31 -0.64 -0.56 -0.42
0.84 0.73 -0.72 -0.53 -0.52 -0.62 0.15 -0.23 0.05 -0.15
1.76 2.02 -2.48 -1.5 -3.32 -4.48 -0.52 -1.61 -0.9 -1.66
0.89 0.86 -1.12 -0.45 -0.52 -0.8 0.34 -0.23 -0.02 -0.38
0.78 0.85 -0.62 -0.03 -0.45 -0.89 0.16 -0.34 -0.12 -0.42
1.37 1.48 -1.66 0.68 -2.39 -2.9 -0.48 -0.66 -1.14 -0.8
0.81 0.87 -1.11 -0.45 -0.82 -1.2 0.46 -0.0 -0.04 -0.22
1.42 1.64 -2.13 -0.18 -2.71 -3.36 -0.06 -0.68 -0.54 -0.78
0.89 0.97 -1.04 -0.54 -1.08 -0.74 0.48 -0.17 -0.22 -0.34
0.96 0.97 -1.33 -0.1 -0.37 -0.84 0.13 -0.34 -0.16 -0.6
1.1 1.18 -1.75 -0.79 -0.31 -1.02 0.25 -0.28 -0.34 -0.71
0.98 0.92 -1.39 -0.46 -0.57 -1.04 0.57 -0.19 -0.16 -0.71
1.38 1.51 -2.95 -0.32 -1.06 -2.06 -0.16 -0.3 -0.4 -1.17
1.01 1.12 -0.84 0.1 -0.7 -1.08 -0.29 -0.14 -0.41 -0.7
1.11 1.16 -1.45 -0.78 -0.48 -0.9 0.28 -0.37 -0.39 -0.62
1.1 0.74 -0.51 0.27 -0.94 -1.27 -0.37 -0.06 -0.4 -0.23
1.26 1.6 -1.41 -0.62 -1.81 -1.91 0.03 -0.43 -0.56 -0.83
1.61 2.02 -4.68 -0.84 -3.91 -4.13 -0.89 -0.76 -0.7 -1.21
1.26 1.27 -1.68 -1.07 -0.91 -1.23 0.15 -0.32 0.01 -0.93
1.76 1.75 -3.26 -1.66 -3.41 -3.36 -0.53 -0.4 -0.38 -1.27
0.84 0.89 -1.03 -0.4 -0.71 -1.37 0.4 0.02 -0.08 -0.28
1.09 1.37 -1.56 -1.2 -0.91 -1.1 0.45 -0.11 -0.37 -1.21
1.83 2.05 -2.73 -0.78 -3.1 -3.89 -0.93 -1.7 -1.35 -2.65
1.22 1.03 -1.54 -0.8 -0.61 -1.09 0.2 -0.17 -0.14 -0.64
1.44 1.5 -2.08 -0.96 -0.74 -1.17 -0.31 -0.73 -0.56 -0.82
1.58 1.67 -2.24 -0.3 -4.12 -4.07 -0.71 -0.29 -0.64 -0.72
0.92 1.37 -0.03 -0.3 -1.52 -1.13 -0.12 0.14 -0.86 -1.49
0.86 1.13 -1.29 -0.58 -1.45 -1.32 0.75 0.06 -0.29 -0.7
1.83 2.24 - -1.1 -3.79 -1.85 -0.89 -3.74 -2.92 -2.68
1.48 1.74 -2.59 -1.21 -2.94 -2.11 -0.18 -0.38 -0.67 -0.68
0.73 0.76 -0.55 0.14 -0.59 -0.66 0.13 -0.27 -0.19 -0.38
0.81 0.81 -0.92 -0.31 -0.46 -0.73 0.28 -0.17 -0.02 -0.43
1.03 1.24 -1.62 -1.68 -1.42 -1.73 0.68 0.06 0.07 -0.77
1.05 1.07 -1.04 -0.34 -0.8 -1.12 0.22 -0.17 -0.43 -0.45
1.59 1.7 -1.68 0.05 -3.81 -3.23 -0.59 -0.11 -1.63 -1.71
1.59 1.71 -2.04 0.02 -3.28 -4.0 -0.68 -0.37 -1.03 -1.3
1.49 1.82 -3.05 -1.88 -3.02 -3.08 0.39 -0.82 -0.71 -0.92
1.13 1.14 -0.87 -0.3 -0.66 -0.92 0.08 -0.49 -0.56 -0.64
1.93 1.97 -5.96 - -5.91 -6.29 -0.06 -1.77 -0.36 -2.38
1.48 1.58 -2.08 -0.17 -2.4 -2.92 -0.37 -0.5 -0.49 -0.75
1.81 1.25 -2.53 0.14 -3.91 -3.95 -0.45 -0.3 -0.53 -1.08
1.46 1.44 -2.1 -1.07 -1.23 -2.05 0.17 -0.72 -0.31 -0.7
1.56 1.61 -2.44 -0.11 -2.74 -3.04 -0.1 -0.58 -0.87 -1.09
1.17 1.25 -0.48 -0.82 -1.24 -1.04 -0.12 -0.33 -0.62 -0.3
1.41 1.48 -1.64 0.56 -4.21 -3.66 -0.11 -0.87 -0.62 -1.05
1.5 1.67 -1.99 -0.52 -4.16 -4.33 0.09 -0.59 -0.67 -0.8
1.43 1.58 -3.07 -0.07 -1.77 -1.75 -0.24 -0.67 -0.64 -0.92
1.7 1.77 -3.16 -0.72 -1.59 -1.32 -0.76 -0.98 -1.04 -1.76
1.38 1.22 -2.22 -0.67 -1.7 -1.86 0.34 -0.03 -0.45 -0.6
1.08 1.02 -1.3 -0.53 -0.89 -0.61 0.2 -0.08 -0.34 -0.58
1.05 1.08 -2.15 -0.55 -1.56 -1.61 0.25 0.52 -0.11 -0.55
0.81 0.8 -1.03 -0.41 -0.73 -1.17 0.47 0.03 -0.05 -0.25
1.65 1.7 -2.4 -1.22 -1.81 -1.98 0.55 -1.22 -0.98 -3.91
1.48 1.79 -2.94 0.01 -1.71 -1.45 -0.09 -1.2 -1.43 -2.26
1.68 1.89 - -3.72 -1.91 -3.5 0.28 -1.13 -0.49 -1.86
0.89 0.79 -1.03 0.06 -0.66 -0.85 0.43 -0.31 -0.25 -0.53
1.31 1.75 -2.23 -0.56 -1.01 -0.88 0.28 -1.61 -1.46 -1.59
1.0 1.04 -1.44 -0.46 -0.62 -1.18 0.39 -0.13 -0.17 -0.65
1.43 1.5 -2.37 -0.32 -1.42 -1.44 -0.08 -0.49 -0.88 -0.92
1.45 1.31 -2.37 0.16 -1.26 -1.77 -0.16 -0.15 -0.81 -1.28
1.22 1.3 -1.72 0.33 -1.75 -2.13 -0.18 -0.4 -0.45 -0.45
1.41 1.18 -3.05 -1.2 -1.96 -1.84 0.24 0.0 -0.37 0.04
1.2 1.24 -2.3 -0.61 -1.68 -1.75 0.53 0.27 -0.68 -0.76
1.75 1.89 -2.35 -1.04 -3.24 -3.52 -0.78 -0.66 -0.91 -1.78
1.54 1.79 -2.41 -0.62 -2.38 -3.12 -0.08 -0.83 -0.68 -1.48
0.72 0.71 -1.02 -0.13 -0.49 -1.03 0.48 -0.06 -0.05 -0.33
1.55 1.87 -1.74 -1.32 -3.79 -3.51 -0.13 -0.68 -0.7 -1.36
1.45 1.71 -2.85 0.23 -2.84 -2.77 0.12 -0.82 -0.87 -2.25
1.55 1.65 -2.69 0.43 -4.2 -4.16 -0.66 -0.43 -1.14 -1.06
1.09 1.0 -1.22 -0.93 -0.47 -0.99 0.27 -0.15 -0.24 -0.46
1.63 1.73 -2.13 -0.44 -3.31 -3.39 -0.07 -0.79 -1.02 -1.3
1.26 1.37 -1.95 -0.83 -1.17 -1.83 0.31 -0.27 -0.18 -0.91
1.73 1.54 -2.6 -2.53 -1.95 -1.4 0.22 -0.17 -1.09 -1.87
1.05 0.96 -1.24 -0.69 -0.76 -0.81 0.32 -0.17 -0.1 -0.51
0.86 0.96 -1.12 -0.72 -0.5 -0.6 0.12 0.15 -0.15 -0.5
1.24 1.42 -1.46 0.01 -2.42 -2.41 -0.47 -0.2 -0.31 -0.31
1.25 1.5 -1.32 -0.71 -1.15 -1.22 0.22 -0.85 -0.77 -0.74
1.52 1.58 -2.57 -0.47 -2.21 -1.75 0.09 -0.54 -0.64 -1.48
1.45 1.53 -2.09 -0.7 -1.52 -2.7 0.02 -0.65 -0.25 -0.94
1.38 1.59 -2.41 -0.13 -1.31 -1.59 -0.23 -0.44 -1.21 -0.89
1.19 1.18 -2.67 -0.26 -1.0 -1.56 -0.01 0.03 -0.27 -0.35
1.16 1.18 -1.48 0.37 -1.29 -1.53 -0.08 -0.26 -0.59 -0.63
1.57 1.99 -2.93 -2.25 -3.91 -4.78 -0.02 -0.65 -0.88 -1.22
1.33 1.3 -2.22 -0.67 -1.79 -2.08 0.37 -0.15 -0.54 -0.4
1.6 1.62 -2.14 -3.74 -3.49 -2.17 0.85 -0.79 -1.26 -1.09
0.78 0.65 -0.41 -0.25 -0.52 -0.44 -0.2 0.04 -0.1 -0.24
1.27 1.4 -1.11 -0.22 -1.02 -1.59 -0.36 -0.46 -0.51 -0.75
0.49 0.43 -0.67 -0.21 -0.05 -0.33 0.29 -0.05 -0.1 -0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.