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Heatmap: Cluster_105 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
809.71 734.57 452.62 637.75 464.51 430.39 1053.25 732.69 892.42 586.62
9.73 10.59 7.93 11.27 6.7 5.02 12.51 12.77 10.7 12.15
113.0 109.59 80.64 86.12 66.13 66.58 139.6 119.65 112.6 92.95
350.33 399.17 141.07 212.18 316.83 209.49 808.0 622.23 630.08 583.26
103.83 104.1 71.97 117.36 83.85 72.27 181.77 129.01 138.3 111.7
135.12 125.71 120.15 86.55 95.46 97.3 194.86 207.97 175.14 150.39
44.25 46.77 27.08 23.13 27.32 25.39 62.92 66.62 54.07 51.14
10.03 9.88 2.59 8.11 4.85 2.94 12.82 9.13 10.51 10.67
19.85 20.16 8.21 22.1 14.67 10.95 25.16 19.5 21.31 18.04
103.31 103.56 102.42 101.62 105.23 91.43 144.55 141.21 140.05 114.92
25.99 29.5 10.54 31.35 7.37 5.95 66.86 45.95 43.59 33.22
1424.81 1304.16 682.86 813.36 816.95 831.61 1945.1 1945.95 2054.62 1653.35
45.09 47.15 15.03 23.94 16.71 13.65 54.43 40.73 46.41 39.56
117.17 116.04 77.51 101.57 101.64 75.34 139.21 125.61 142.62 119.67
94.94 92.34 64.95 130.61 76.95 61.44 98.76 93.16 105.11 88.87
19.15 17.61 4.94 10.89 4.33 3.6 25.14 20.07 19.77 20.67
58.99 58.85 28.89 57.7 34.25 21.8 105.99 89.6 79.86 65.56
829.84 847.38 448.99 1301.62 663.63 609.12 1618.47 1373.16 1467.7 1159.48
28.66 28.22 14.9 26.15 10.09 8.55 48.64 34.77 42.22 28.94
0.77 0.9 0.41 0.93 0.21 0.13 1.4 0.52 0.69 0.69
8.52 8.7 1.02 4.09 3.02 2.34 14.7 9.15 11.48 8.12
4.98 5.04 2.52 6.32 3.69 2.1 8.42 3.89 5.19 3.14
645.47 684.77 48.69 116.32 190.67 185.58 965.04 594.26 603.75 485.9
6.32 7.24 5.45 7.46 3.47 2.84 14.81 9.96 10.83 5.74
4.06 4.2 2.08 0.3 0.8 0.97 3.92 4.65 6.01 3.62
284.06 283.6 146.97 191.1 168.34 132.66 303.96 297.67 278.54 306.35
11.15 11.94 2.75 7.22 2.16 1.64 16.36 13.52 13.26 9.09
462.51 362.82 275.1 263.67 213.66 158.76 409.75 321.96 462.48 279.82
163.19 171.21 115.18 162.49 158.85 151.07 259.0 210.55 226.17 192.93
30.66 31.01 23.98 29.03 31.26 24.5 64.46 48.3 47.17 36.09
37.96 35.89 35.56 31.22 35.93 25.35 62.19 56.56 54.22 47.11
22.47 23.01 6.24 17.97 11.87 9.04 26.43 22.23 29.76 30.6
40.01 34.2 27.79 34.08 31.23 32.38 46.23 39.25 42.36 33.64
1.44 1.33 1.29 1.24 0.68 0.91 2.02 1.86 1.62 1.33
175.38 174.24 148.44 223.85 199.12 113.41 270.7 219.89 253.28 238.14
3.85 4.2 2.36 5.06 5.15 3.45 9.64 7.94 7.81 5.58
16.67 19.94 10.2 16.06 13.07 9.32 24.2 18.58 19.96 16.04
1.25 1.38 1.02 1.38 0.1 0.04 3.22 1.04 1.75 1.52
59.35 63.03 47.51 48.8 39.8 35.95 77.04 72.01 74.64 54.04
11.91 13.07 14.03 17.35 15.71 12.94 22.38 18.3 17.59 15.9
2.12 2.81 1.28 3.9 1.05 0.83 4.16 4.18 4.66 2.43
130.79 113.35 38.39 79.01 40.81 37.92 165.75 170.56 139.5 147.82
59.22 61.25 47.4 49.4 56.82 46.4 66.12 65.47 65.17 61.47
2.63 2.68 0.59 1.07 0.41 0.35 9.37 7.0 6.92 3.72
5.17 4.41 2.36 5.74 2.04 1.0 12.07 5.13 5.52 4.04
7.6 8.07 6.46 10.16 6.6 4.98 13.07 10.4 11.55 9.71
149.59 150.04 70.42 136.93 153.4 96.65 196.09 149.92 162.79 152.08
132.28 133.48 75.95 144.45 117.28 77.54 208.52 143.45 161.56 128.03
4.77 5.99 1.4 4.0 1.42 1.13 11.47 6.53 5.6 3.64
1.73 1.08 0.18 1.32 0.07 0.14 2.39 2.45 1.65 1.84
1.77 1.93 1.43 3.01 0.35 0.37 6.89 7.28 5.71 5.88
76.21 73.14 24.75 39.93 26.5 24.73 129.2 121.43 100.56 107.07
104.84 85.16 54.0 115.6 53.99 33.67 108.8 67.63 92.91 83.03
155.53 197.32 81.52 112.25 78.13 80.05 217.4 193.49 182.0 115.64
2.66 3.1 1.42 2.13 0.61 0.82 7.28 8.8 6.89 3.96
27.17 30.51 11.69 27.07 15.69 20.78 49.89 28.79 31.78 26.67
81.25 83.03 54.1 83.04 52.6 46.58 124.42 103.5 99.63 95.96
11.54 10.05 3.74 2.44 4.48 4.64 15.47 9.03 10.81 9.86
109.41 98.74 56.87 82.38 47.33 55.54 134.49 93.19 109.98 75.74
24.33 28.18 12.73 20.51 16.77 9.36 42.52 28.26 29.15 25.79
12.73 16.86 5.04 10.32 1.25 1.03 27.94 21.08 20.65 15.71
67.35 74.93 42.35 90.12 87.41 56.65 139.85 99.57 108.73 90.65
6.59 6.78 0.65 2.25 0.9 0.64 10.76 7.96 6.99 3.9
16.9 22.83 13.51 17.86 17.79 15.27 38.86 33.54 28.18 23.99
25.15 29.17 17.34 22.31 21.06 16.61 33.38 24.13 23.84 22.26
2.63 3.39 0.93 3.21 1.36 0.79 5.78 3.28 2.38 2.14
231.92 232.95 183.6 261.13 181.79 157.51 343.2 289.25 290.8 225.66
4.49 4.52 0.59 2.11 0.93 2.06 9.8 6.02 5.75 2.38
0.08 0.09 0.03 0.06 0.0 0.0 0.32 0.12 0.18 0.1
154.1 157.63 54.46 95.62 115.01 81.55 200.1 144.31 163.43 131.59
27.66 27.19 31.22 39.68 35.64 34.65 70.15 50.01 60.07 49.19
11.81 20.37 3.05 3.33 0.21 1.06 27.28 15.08 15.07 9.51
24.18 21.32 15.67 28.54 13.46 9.42 32.26 22.4 22.39 18.56
152.13 167.54 108.15 129.97 132.34 74.85 211.29 178.14 181.71 158.44
6.94 4.12 0.58 0.0 0.0 0.0 0.0 5.41 6.12 5.89
87.77 111.14 15.58 43.11 17.65 29.12 189.41 101.08 85.5 50.16
252.79 249.08 229.79 332.42 250.35 202.11 426.81 353.81 366.77 305.24
86.82 81.3 58.77 24.78 41.41 43.27 145.34 109.19 133.08 70.23
9.05 9.87 7.02 9.91 8.58 5.56 13.0 10.52 9.87 6.94
14.1 13.65 5.24 32.46 6.12 3.91 44.44 32.11 27.15 18.28
62.08 53.45 36.3 38.07 32.05 35.09 95.75 90.27 89.03 80.26
3.03 3.4 1.86 2.29 1.13 1.48 8.67 7.25 8.29 3.99
86.9 85.8 73.51 113.55 94.67 85.75 151.78 125.11 133.03 110.69
2.73 2.7 1.2 3.16 1.4 0.54 4.37 3.44 2.69 1.59
21.52 23.22 15.41 13.37 8.35 7.87 31.89 34.06 25.7 27.33
56.44 61.74 36.15 72.86 37.28 30.52 123.54 99.49 95.65 85.71
44.95 40.65 13.59 36.67 26.45 33.07 105.68 70.82 49.15 45.61
3.96 4.5 2.69 3.0 2.26 1.53 5.27 4.66 5.2 4.18
394.74 383.94 201.4 347.21 270.16 244.95 588.23 586.77 551.41 438.9
6.99 6.95 4.37 8.07 4.12 3.38 13.88 10.28 9.13 7.65
7.93 7.85 6.72 4.02 3.69 3.12 19.28 11.78 10.88 9.15
52.48 53.11 23.59 32.39 29.37 20.83 52.98 56.17 57.11 49.54
35.76 36.16 13.49 38.9 21.02 14.45 46.05 56.58 43.55 38.95
55.87 51.6 39.51 52.58 47.11 31.63 75.98 51.72 54.88 61.12
711.42 585.33 315.11 247.49 232.18 214.35 584.57 473.71 536.97 403.83
97.84 101.0 70.05 83.64 70.27 58.98 101.3 92.77 100.39 83.68
10.39 6.61 5.87 8.08 4.43 5.08 18.14 27.09 18.22 15.51
43.23 37.77 3.83 13.87 3.09 1.51 60.28 33.5 35.75 25.54
71.79 90.19 11.77 54.21 23.07 18.86 154.95 111.96 86.94 50.4
31.68 29.97 13.65 24.18 6.56 5.73 74.38 63.28 48.37 43.98
29.37 29.8 20.78 33.38 31.55 21.62 59.68 46.28 48.04 38.85
107.91 108.93 66.06 79.44 52.31 47.86 135.24 137.68 142.27 141.69
267.44 248.26 109.82 186.96 211.1 132.4 451.21 415.04 415.47 283.63
6.35 3.17 5.52 10.93 1.71 1.22 13.2 14.18 12.04 6.98
8.3 8.72 7.04 11.02 6.74 5.16 16.25 15.2 14.91 14.54
50.47 50.02 51.28 53.67 50.88 42.19 61.82 59.67 54.46 55.82
30.93 29.31 23.39 39.36 42.31 24.93 56.93 44.52 47.47 43.08
24.01 31.29 6.76 23.44 8.37 7.66 47.02 39.58 43.34 39.32
256.09 197.64 141.33 208.57 163.5 105.45 277.2 180.8 238.13 208.52
30.83 32.64 31.52 36.08 37.35 32.03 43.33 35.81 39.11 38.69
71.05 79.56 41.63 45.07 43.94 31.2 90.22 86.07 80.39 67.52
3.66 2.76 0.51 2.18 0.14 0.13 13.69 9.41 9.6 5.48
8.23 10.42 6.05 6.95 6.95 5.28 19.52 13.99 16.45 13.34
9.24 6.76 8.41 3.83 7.36 6.13 21.42 15.86 15.12 10.73
91.75 87.5 53.86 47.48 60.85 52.86 105.77 84.5 91.62 79.0
523.8 482.52 268.66 283.83 332.88 268.31 619.8 552.61 542.74 418.02
2.88 3.95 2.5 7.27 0.89 0.93 20.32 12.05 11.75 8.79
409.28 360.69 366.76 259.58 162.69 140.04 370.76 351.4 404.95 318.4
258.79 208.54 124.14 50.2 74.09 70.17 170.11 151.6 197.56 116.08
0.03 0.0 0.0 0.0 0.04 0.0 0.23 0.0 0.15 0.09
26.9 27.82 24.67 25.8 23.45 19.43 36.72 27.63 30.31 27.56
369.39 377.85 172.64 197.6 255.62 249.14 538.81 421.84 426.74 320.68
6.13 7.51 0.77 5.52 1.19 0.63 12.2 7.61 8.67 5.57
181.15 178.28 136.17 184.75 204.42 128.72 285.85 226.55 233.27 205.73
47.19 48.36 24.41 64.32 19.5 16.67 92.39 80.66 81.58 55.24
17.17 16.56 11.64 18.83 19.01 8.8 28.59 24.78 27.03 24.0
113.94 103.76 64.0 57.8 47.29 35.97 101.21 77.61 97.45 66.33
6.42 5.78 2.83 9.0 1.29 0.69 13.02 15.86 11.52 9.57
13.29 13.71 4.53 7.56 0.87 0.83 15.15 17.09 16.6 15.21
82.4 88.51 40.93 82.81 62.05 43.08 144.49 109.0 103.42 77.25
51.28 50.93 22.22 50.53 24.97 22.65 93.35 73.15 70.83 62.37
59.16 64.61 30.01 52.15 21.55 25.53 76.46 69.2 74.95 66.09
135.12 137.84 94.71 138.67 132.22 87.33 195.2 146.82 155.52 145.85
120.97 128.18 83.66 95.33 96.13 85.56 179.7 122.95 127.75 113.74
7.26 6.08 3.95 7.44 3.67 3.71 16.33 16.56 14.28 12.08
3.49 3.11 3.27 4.68 3.29 2.35 5.8 4.5 4.93 3.63
9.51 12.23 2.18 16.76 3.69 1.23 19.34 18.59 19.45 17.91
441.27 416.71 183.19 358.37 335.3 214.28 592.47 386.56 468.67 385.93
43.66 42.54 29.92 37.42 31.27 31.32 65.46 59.66 61.51 44.34
27.53 27.54 19.11 27.22 20.74 17.26 31.52 28.37 36.16 25.59
68.12 69.16 51.42 57.21 55.9 49.17 91.24 77.15 65.59 67.19
2.89 3.32 1.28 1.52 1.66 1.95 8.99 6.22 4.55 3.95
180.7 171.31 90.17 164.26 101.97 76.75 198.4 215.96 159.71 120.13
25.98 33.48 12.05 17.86 7.71 6.69 51.7 51.68 43.96 29.58
12.3 12.7 17.4 21.48 13.65 14.06 36.58 59.97 31.91 32.09
11.78 14.63 9.18 12.58 9.74 6.26 17.63 16.12 16.28 13.51
41.12 44.31 23.8 65.06 42.17 30.28 166.24 87.99 96.95 66.2
24.44 24.94 19.45 22.43 22.62 18.62 41.2 30.34 32.48 24.85
11.36 13.59 1.37 4.24 8.22 6.07 26.9 18.64 19.52 10.92
5.59 6.59 1.09 2.39 0.71 0.7 6.21 6.21 4.47 3.76
101.5 100.5 64.19 135.28 88.49 84.78 154.34 125.06 127.5 102.94
21.58 21.07 19.12 18.97 12.53 10.74 45.8 37.5 44.73 20.39
1.1 1.06 0.0 0.07 0.13 0.05 1.28 0.77 0.74 0.72
0.15 0.34 0.05 0.0 0.0 0.02 1.07 1.19 1.12 0.49
77.19 73.93 45.44 59.81 62.01 40.82 93.93 70.62 73.73 62.75
1.16 0.88 0.49 1.6 0.35 0.06 3.41 2.03 2.02 1.45
6.42 6.4 5.01 3.94 2.53 2.37 12.25 13.85 10.76 7.37
1344.01 1343.06 664.37 1223.22 799.17 545.9 1647.19 1640.09 1735.93 1666.95
10.86 10.87 2.72 11.73 4.2 2.59 21.08 13.42 11.81 7.24
29.62 20.84 2.28 3.61 2.5 3.46 20.89 36.82 28.92 22.01
452.25 452.62 173.58 450.98 443.52 241.11 660.37 457.12 545.97 392.78
64.25 65.98 38.44 39.22 32.2 23.27 87.34 72.76 70.26 62.24
90.15 82.69 42.71 106.17 65.06 54.08 126.66 111.03 129.77 103.43
3.88 3.26 1.18 2.49 0.34 0.19 7.19 4.73 4.66 2.28
67.69 72.9 46.4 61.43 51.85 47.83 107.12 111.0 91.77 90.26
9.15 10.41 2.36 9.69 2.76 2.41 13.14 14.43 15.2 10.07
2.46 3.15 0.87 7.46 0.58 0.36 11.59 8.0 6.97 5.22
3.87 2.99 1.77 3.0 1.64 1.93 7.88 8.69 7.98 7.37
11.99 10.72 5.24 5.84 3.93 3.2 15.63 11.52 11.65 10.24
136.55 116.8 87.31 103.65 130.57 99.58 220.55 143.71 206.27 120.49
14.87 19.48 16.91 17.77 28.03 20.04 38.65 48.62 38.94 35.0
59.08 68.69 13.13 29.27 14.56 11.09 82.64 66.26 53.75 59.41
0.0 0.0 0.44 1.65 0.25 0.67 4.07 2.25 3.49 2.15
8.68 5.9 2.86 18.24 6.7 4.28 40.12 32.81 28.42 15.13
44.25 49.97 31.92 45.73 27.54 20.54 68.6 53.1 54.82 40.97
2.38 2.63 0.38 2.72 0.51 0.29 7.45 4.21 2.69 0.91
18.07 18.51 6.49 6.77 4.71 5.1 18.33 26.68 22.41 16.69
0.2 0.13 0.0 0.0 0.0 0.0 0.51 0.36 0.25 0.2
4.63 4.99 1.07 0.73 0.37 0.43 9.21 3.88 5.75 3.82
82.98 74.62 52.44 65.12 29.63 26.92 220.27 183.63 195.11 118.14
6.09 7.5 1.49 5.27 1.39 1.38 10.25 8.75 5.32 3.37
37.1 46.14 23.74 16.05 19.17 14.25 54.39 48.99 48.64 33.69
4.87 4.62 3.75 10.88 1.13 0.87 18.13 13.65 13.04 11.44
1.28 0.93 0.65 1.34 0.22 0.17 2.36 1.04 1.35 0.8
0.41 0.36 0.0 0.0 0.0 0.0 1.32 1.78 1.48 0.44
19.73 22.95 2.79 17.68 3.63 2.6 33.12 20.01 22.21 12.93
0.19 0.58 0.09 0.4 0.13 0.38 1.65 0.59 1.09 0.73
16.98 19.69 11.06 13.15 12.35 10.0 23.4 22.52 21.65 21.21
17.75 20.89 10.68 7.22 9.85 10.5 23.36 18.72 20.28 17.47
8.88 10.91 5.61 12.49 9.4 4.44 19.08 16.18 16.2 14.61
299.12 299.86 55.03 65.52 178.43 156.3 552.44 345.31 344.59 192.43
6.29 7.05 1.77 3.99 1.66 3.3 11.58 8.42 6.99 5.53
144.21 145.66 138.72 163.2 131.35 106.48 220.42 180.59 179.12 174.73
19.58 21.1 10.71 25.55 13.63 11.4 37.86 28.44 24.0 21.47
47.37 47.47 16.23 44.88 33.65 36.5 74.96 52.14 57.35 33.71
93.24 87.79 72.66 112.45 109.44 86.37 173.4 230.15 186.46 152.57
33.04 34.17 24.3 36.73 28.82 23.44 44.58 31.46 29.71 32.18

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)