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Heatmap: Cluster_132 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-0.77 -0.51 -0.54 0.59 -1.07 -0.91 0.12 0.19 -0.19 1.27
-0.53 -0.55 -0.29 -0.53 -0.3 -0.77 0.31 0.43 0.31 0.92
- - -1.82 2.0 - - - -0.65 0.04 2.01
-5.19 -4.71 0.47 -0.29 -0.58 -0.95 -0.21 0.69 0.51 1.4
- - 0.28 1.46 -2.03 - - 0.3 0.38 1.71
-0.56 -0.48 -0.22 0.1 -0.8 -1.22 0.14 0.36 0.22 1.08
-1.23 -1.19 -0.34 -0.28 -1.6 -1.44 0.35 0.69 0.33 1.42
-3.07 -3.26 -0.27 1.54 -1.59 -0.42 -0.55 -0.5 -0.32 1.47
- - - 0.32 - - - 1.54 0.79 2.04
-1.54 -1.2 -0.04 0.13 -1.0 -0.55 0.24 0.87 0.46 0.67
-0.4 -0.29 -0.17 0.03 -0.44 -0.45 -0.01 0.27 0.29 0.7
-0.83 -0.58 -0.19 1.14 -0.45 -1.15 -0.46 0.04 0.08 0.76
-1.71 -1.83 -2.61 1.2 -1.93 -1.46 -0.86 0.77 -0.63 1.78
-3.06 -2.71 0.16 1.68 -1.71 -1.58 -1.13 -0.17 -0.19 1.35
- - - 0.23 -6.06 - -2.18 0.65 -1.69 2.75
-6.26 -8.3 -0.05 0.35 -2.29 -2.48 0.42 0.84 0.25 1.61
- - -2.8 2.09 - - - 0.1 -1.08 2.02
-5.56 -7.31 -1.15 1.97 -0.58 -0.44 -2.54 0.02 -0.16 1.08
-1.69 -1.56 -0.04 0.61 -2.5 -2.28 -0.19 0.21 0.08 1.76
-4.91 -8.78 0.15 -0.03 -1.39 -4.29 -0.15 0.47 0.46 1.92
-5.61 -5.88 -1.3 1.88 -3.73 -1.56 - -0.44 0.04 1.89
- - -1.82 1.44 -3.97 -5.37 -1.3 1.09 0.07 1.73
- -2.39 -1.82 0.35 - - -0.87 1.45 0.68 1.75
-1.71 -1.72 0.21 -0.51 -1.14 -1.45 0.12 0.56 0.26 1.57
-8.43 -10.18 0.98 -1.05 -0.09 -2.03 -0.21 0.38 0.7 1.36
-2.09 -2.11 -1.4 0.94 -1.08 -1.8 -0.0 0.36 0.2 1.61
-0.99 -0.95 -0.67 0.49 -0.96 -1.39 0.02 0.27 0.17 1.44
- - - 0.88 - - - 1.36 - 2.48
-1.14 -1.0 0.45 -0.22 -2.13 -2.06 0.36 0.49 0.01 1.41
- - -4.28 1.79 -4.87 -4.77 -6.06 -1.37 -0.72 2.44
- -2.81 -0.79 0.24 - - 0.29 0.43 -0.33 2.24
- -2.6 0.37 1.39 - -2.34 -1.09 0.38 0.48 1.35
- - -1.11 0.69 -2.75 -3.67 0.06 1.07 -0.01 1.83
-3.46 -2.36 -0.5 1.16 -0.92 -0.66 -0.34 0.25 -0.46 1.54
-0.81 -0.7 -0.07 0.88 -1.99 -1.47 -0.59 0.2 0.29 1.25
-1.64 -1.52 0.59 -1.21 -2.8 -2.78 -0.26 0.81 -0.12 1.85
-2.41 -2.58 -3.52 0.56 -1.19 -2.9 0.16 -0.04 -0.87 2.29
-4.22 -4.39 -0.67 -1.1 -1.45 -1.57 0.13 1.53 -0.73 1.82
-4.69 - 0.51 -0.69 -2.89 -2.8 0.12 0.92 0.7 1.6
-1.88 -1.73 -0.4 0.48 -0.82 -0.67 0.24 0.73 0.34 0.98
-4.65 -4.35 -0.5 0.86 -1.17 -0.13 -1.38 0.55 -0.95 1.88
- - -1.35 0.66 -3.22 -2.87 -0.42 1.01 -0.48 2.11
- - -4.84 2.36 -2.52 -1.23 - -4.83 -2.01 1.98
- - -3.3 2.09 -1.38 -1.25 -3.02 -0.37 -0.57 1.71
-0.81 -1.08 -0.91 0.72 -2.53 -2.53 -0.06 0.76 -0.23 1.55
-3.78 -1.82 -0.87 1.96 -3.36 -5.15 -1.12 0.08 -0.48 1.52
- -8.97 -1.2 0.64 -2.95 -1.49 -0.1 1.32 0.2 1.55
-0.18 -0.64 -1.53 0.24 - - -0.29 1.1 -3.32 1.96

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.