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Heatmap: Cluster_215 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-2.72 -3.18 0.96 1.3 -0.56 -0.31 0.19 0.33 -0.34 -0.62
-1.49 -1.0 1.62 2.14 - - - -0.55 -2.22 -0.4
-5.86 -6.77 1.08 1.37 -0.18 -0.75 -0.6 -0.32 0.09 0.34
- -3.77 1.18 1.99 -1.57 -1.22 -2.26 0.7 -2.29 -0.18
-0.76 -0.84 0.38 1.06 -0.15 -0.22 -0.4 -0.18 -0.13 0.19
-1.99 -1.93 0.66 1.54 -0.74 -0.35 -0.09 -0.21 0.06 -0.38
-0.92 -1.05 0.91 0.76 -0.23 -0.29 -0.56 0.12 -0.02 -0.01
-1.41 -1.33 0.66 1.19 -0.07 0.09 -0.38 -0.2 -0.1 -0.39
- - 1.54 1.74 -0.81 0.04 0.04 -1.11 -1.02 -2.61
-0.83 -0.83 0.47 0.91 -0.05 -0.22 -0.41 0.03 -0.0 0.02
-2.42 -3.33 0.89 1.73 -0.71 -0.98 -0.08 -0.92 0.04 -0.13
-0.35 -0.39 0.48 0.42 -0.14 -0.02 -0.17 -0.13 0.06 -0.03
-0.93 -0.61 0.57 0.96 -0.02 0.0 -0.61 -0.02 -0.34 -0.06
-1.86 -1.02 1.39 1.29 -0.32 -0.57 -1.14 -0.64 -0.09 -0.59
-1.81 - 1.87 2.03 - -0.41 - - -1.49 -0.18
-2.14 -2.54 0.81 1.28 -1.21 -1.27 -0.31 -0.0 0.37 0.57
-4.67 -4.44 1.4 1.33 -0.42 -0.19 -2.26 -0.38 -0.04 0.26
-0.52 -0.46 0.28 0.5 -0.25 -0.19 0.11 0.19 0.04 -0.02
-1.79 -1.48 0.53 1.42 0.31 -0.19 -0.52 -0.44 -0.38 -0.13
-1.67 -1.69 0.74 1.59 0.04 -1.02 -2.49 -0.39 -0.03 0.34
- - 2.0 1.56 -0.65 -1.11 - -0.33 -0.07 -2.38
-0.83 -1.05 1.07 1.05 -0.52 -0.51 -1.5 0.13 -0.22 0.11
-4.68 -3.84 1.09 2.06 -0.45 -0.41 -1.45 -1.27 -0.04 -1.53
-4.24 -2.41 0.9 2.12 -1.82 -0.38 -1.89 -2.15 0.84 -2.27
- -9.79 1.19 1.56 -0.84 -0.69 -0.13 -0.08 -0.71 0.17
-2.57 -1.99 0.72 1.1 -0.03 -0.59 -0.13 0.28 -0.14 0.15
-6.35 -4.52 1.25 1.7 -0.59 -0.42 -1.1 -0.76 -0.15 -0.07
-5.62 -5.4 1.22 1.75 -2.2 -1.57 -0.4 0.2 -0.45 0.08
-0.74 -0.8 0.61 0.93 -0.24 -0.25 -0.75 0.17 -0.16 0.12
-2.75 -2.67 1.19 1.74 0.0 -0.18 -1.06 -0.74 -0.54 -1.22
-5.21 -4.95 1.04 1.56 0.04 -0.23 -0.63 -0.11 -0.26 -0.62
-1.02 -0.9 0.47 0.85 -0.02 -0.05 -0.12 -0.02 0.02 -0.14
-0.58 -0.46 0.37 0.63 -0.07 -0.21 -0.16 0.09 -0.04 0.01
-2.19 -1.62 1.24 1.91 -1.76 -2.4 -0.85 -0.18 -0.75 -0.28
-3.32 -3.14 0.95 1.28 0.04 -0.87 -0.37 -0.01 -0.02 0.14
-0.63 0.18 1.54 1.25 -1.15 -2.54 0.04 -1.13 -0.99 -1.65
-0.25 -1.72 2.05 1.41 -0.81 -2.27 - - -1.24 -0.22
-0.82 -0.71 0.62 0.76 -0.11 0.03 -0.39 0.07 -0.01 -0.25
- - 1.76 1.69 -2.89 - -3.16 -0.03 -0.88 0.7
-1.44 -1.34 0.96 1.28 -0.84 -0.43 -0.34 -0.33 -0.15 0.11
-1.9 -1.88 1.56 1.0 -0.59 -0.55 -0.82 -0.06 -0.28 -0.27
- -5.45 1.23 1.9 -0.47 -0.23 - 0.3 -0.96 -0.78
- - 1.22 1.64 -0.56 0.03 -1.67 -0.6 -0.47 0.21
-1.94 -1.38 0.93 1.07 -0.63 -0.24 -0.42 -0.01 0.23 -0.07
- - 2.1 1.56 -2.28 -1.65 -3.35 -0.61 -0.29 -0.56
-5.1 -5.85 1.26 1.65 -0.53 -1.25 -0.58 -0.16 0.41 -1.22
-1.06 -1.29 0.82 0.61 -0.27 -0.2 -0.29 -0.0 0.16 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.