Heatmap: Cluster_228 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
2.0 2.12 -3.84 -1.62 -2.66 -2.53 -1.5 -2.05 -3.21 -2.2
1.92 2.12 -1.81 -0.23 -3.34 -4.33 -3.49 -2.47 -2.65 -2.54
2.06 2.19 -4.46 -0.3 -2.82 -3.2 - -3.93 -4.53 -4.46
2.24 2.37 - -4.62 -7.53 - -6.63 -6.48 -5.85 -9.01
2.17 2.22 - -1.19 -2.32 - - -2.28 - -
1.86 2.07 -3.51 -1.16 -3.63 -3.48 -1.62 -1.43 -1.63 -1.2
1.97 2.04 -3.67 -0.88 -1.93 -3.29 -1.79 -2.04 -2.13 -2.13
2.1 2.21 -4.33 -1.1 -3.26 -3.92 -3.12 -3.27 -3.68 -3.24
1.91 2.08 -2.97 -1.27 -2.13 -3.41 -3.19 -2.35 -2.95 -0.52
1.84 2.04 -1.64 -1.03 -1.57 -1.7 -2.4 -2.41 -2.02 -2.26
1.42 1.56 -0.62 -0.36 -1.15 -1.01 -0.76 -1.09 -1.0 -1.17
2.25 2.39 - - - - -7.74 -9.39 -9.99 -9.12
2.14 2.22 -4.72 -2.68 -6.41 -5.88 -2.03 -2.48 -3.05 -2.68
1.9 2.04 -2.38 -1.07 -2.07 -1.55 -1.86 -2.06 -2.51 -2.16
2.04 1.96 -3.53 -0.91 -3.19 -3.78 -1.4 -1.93 -1.69 -2.02
1.97 1.91 -1.45 -1.33 -2.42 -1.59 -2.22 -1.52 -2.2 -1.84
2.22 2.35 -5.43 -4.26 -6.4 - - -3.55 -4.96 -5.3
2.3 2.34 - - - - - - - -
2.21 2.37 -4.99 -4.82 - - -4.1 - -3.54 -
2.01 2.24 -2.22 -1.0 -4.73 -4.11 -3.23 -2.57 -3.26 -3.87
2.17 2.18 -4.58 -2.69 -7.84 -5.63 -1.51 -2.74 -2.8 -3.36
1.98 2.1 -3.69 -0.78 -3.52 -2.53 -2.86 -2.77 -2.65 -1.36
1.73 1.74 -1.29 -0.88 -1.38 -1.15 -1.16 -1.52 -1.33 -1.48
2.11 1.96 -4.37 -0.74 -1.75 -3.72 -3.45 -1.97 -2.15 -2.24
1.76 1.98 -3.35 -1.52 -2.54 -2.85 -0.53 -1.15 -0.79 -2.41
1.85 2.26 -4.64 - -2.73 -2.34 -0.94 -2.22 -1.27 -3.72
1.92 2.06 -2.89 -0.44 -3.55 -3.95 -1.94 -2.09 -2.26 -1.65
1.78 2.1 -3.72 -1.87 -2.65 -3.7 -1.12 -1.32 -0.99 -1.56
1.98 2.43 -5.45 -1.23 - - -5.57 -3.1 -5.6 -3.94
1.68 2.1 -2.52 -0.87 -3.05 -3.97 -1.51 -1.23 -1.18 -1.36
1.88 2.29 -1.68 -0.3 - - - -4.28 -2.43 -3.7
2.19 2.28 -5.47 -4.23 -5.68 -6.06 -2.99 -2.89 -3.47 -2.92
1.97 2.12 -2.13 -0.82 -2.43 -2.41 -2.42 -3.21 -2.85 -2.85
2.24 2.34 -6.67 -5.77 -7.59 -8.55 -5.67 -4.1 -5.11 -3.85
2.25 2.34 -8.81 -4.4 -7.18 -7.15 -5.29 -5.02 -4.65 -4.92
2.22 2.25 -6.12 -3.67 -3.73 -3.43 -3.01 -3.34 -4.26 -4.14
2.04 2.15 -2.92 -2.4 -3.42 -2.78 -2.29 -1.72 -2.51 -2.28
2.02 2.32 -4.81 -1.11 -4.32 -6.33 -3.51 -3.6 -3.09 -3.37
2.26 2.33 - - - -5.22 - - -4.96 -2.98
2.25 2.33 - -4.24 -8.94 -9.33 - -5.1 -6.5 -3.02
2.1 2.23 - -0.56 -3.82 -4.2 - -3.76 -2.94 -
2.26 2.3 -7.36 -2.45 -6.72 -6.41 -4.66 -5.81 -7.92 -8.42
2.07 2.05 -2.6 -1.1 -2.4 -2.97 -2.19 -2.54 -2.46 -2.66
2.26 2.34 - -6.83 -8.92 - -4.1 -7.26 -5.13 -4.92
2.14 2.21 -4.38 -2.31 -5.31 -4.88 -2.71 -2.55 -3.11 -2.17
2.05 2.21 -3.37 -1.04 -4.71 -4.72 -2.52 -2.84 -2.97 -2.95
2.25 2.39 -11.82 - -10.31 -9.98 -7.62 -9.13 -8.31 -8.99
1.85 1.99 -2.21 -0.3 -1.59 -2.08 - -2.02 -2.71 -1.17
1.78 2.18 -3.17 -0.68 -3.4 -3.54 -1.17 -1.85 -1.82 -2.95
2.22 2.32 -6.22 -4.34 -3.17 -3.63 -4.52 -5.64 -5.38 -5.98
1.97 2.09 -4.13 -1.02 -2.45 -2.25 -1.68 -2.44 -2.62 -2.31
1.87 2.3 - -0.43 -1.85 -2.43 - -4.21 -3.66 -3.52
1.78 2.11 -4.98 -2.34 -2.19 -3.48 -0.61 -1.42 -1.51 -1.55
2.13 2.18 -4.13 -2.91 - -3.2 -1.44 -1.85 - -2.78
1.48 1.91 -1.69 -0.29 -0.92 -1.13 -1.05 -1.72 -1.46 -2.52
1.96 2.11 -3.8 -0.95 -4.9 -4.49 -1.67 -2.04 -1.97 -1.68
2.01 2.23 -4.84 -0.8 -4.59 -5.14 -2.38 -2.71 -3.02 -2.95
2.31 2.33 - - - - - - - -
1.83 1.88 -2.15 -1.22 -1.58 -1.37 -1.2 -1.45 -1.77 -1.73
1.59 1.9 -1.63 -0.86 -1.75 -1.75 -0.68 -1.16 -1.24 -1.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.