Heatmap: Cluster_131 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	sid-dev (Zhang et al., 2022)	wt-dev (Zhang et al., 2022)	untreated (Thomas et al., 2018)	treated - synthetic auxin (Thomas et al., 2018)	untreated (Wang et al., 2019)	mowed (Wang et al., 2019)	time point 1 (Ogden et al., 2020)	time point 2 (Ogden et al., 2020)	time point 3 (Ogden et al., 2020)	time point 4 (Ogden et al., 2020)
Bradi1g02380.1	-0.4	-0.35	0.62	0.28	-0.22	-0.26	-0.42	0.16	-0.09	0.28
Bradi1g11220.1	-1.61	-1.56	1.47	-0.1	0.13	0.33	-0.03	-0.22	-0.25	-0.74
Bradi1g12853.1	-	-	2.48	-0.66	-1.0	-	-	0.47	0.3	-0.6
Bradi1g13680.1	-2.36	-1.34	1.16	0.39	-0.28	-0.36	-0.51	-0.01	-0.28	0.8
Bradi1g18920.1	-	-1.45	2.35	-	0.2	-	-	0.23	-0.92	0.77
Bradi1g21570.1	-	-	1.61	0.79	0.28	-0.76	-0.87	-0.43	-0.22	0.32
Bradi1g24960.4	-1.09	-0.93	0.96	0.04	-0.46	-0.08	-0.5	0.11	-0.17	0.75
Bradi1g27060.1	-0.51	-0.42	0.91	0.19	0.12	-0.09	-0.23	-0.26	-0.07	-0.2
Bradi1g32640.11	-7.49	-8.39	1.83	0.32	-1.32	-0.45	-0.74	-0.08	-0.27	0.75
Bradi1g34135.1	-1.3	-1.31	1.43	-0.01	0.02	-0.38	-0.31	0.28	-0.56	0.03
Bradi1g36640.1	-0.83	-0.91	1.38	-0.69	-0.14	0.15	-0.58	0.04	-0.41	0.28
Bradi1g37304.1	-1.46	-1.15	2.03	-0.73	-1.37	0.84	-	-1.28	0.34	-0.65
Bradi1g42490.11	-0.99	-1.8	1.99	-0.04	0.22	-0.28	-1.2	-0.68	-0.38	-1.19
Bradi1g43690.1	-2.36	-2.68	1.55	-0.72	-1.43	-1.45	-0.29	0.37	0.61	0.8
Bradi1g44605.1	-1.07	-	2.89	0.2	-	-0.07	-	-	-	-
Bradi1g44670.3	-6.39	-5.71	1.92	-1.55	-0.69	-0.42	-0.86	0.19	0.43	0.51
Bradi1g48708.1	-1.05	-1.49	1.64	0.55	-0.32	0.07	0.03	-1.44	-1.07	-0.22
Bradi1g53743.1	-	-	2.19	-	-	-	-	-	0.67	1.95
Bradi1g57942.1	-	-	2.23	-	-	-	-	-	-	2.41
Bradi1g60392.1	-4.19	-5.35	1.5	0.92	-1.48	-2.47	-	0.51	0.45	0.9
Bradi1g63030.1	-6.8	-9.27	1.71	-0.03	0.21	-0.33	-0.71	-0.1	-0.2	0.45
Bradi1g66580.1	-0.38	-0.4	0.8	0.31	-0.23	0.2	-0.11	-0.13	-0.24	-0.3
Bradi1g69048.1	-2.03	-1.76	1.79	0.46	-0.32	0.06	-0.05	-0.54	-0.72	-0.92
Bradi1g69270.1	-1.49	-2.02	1.74	-1.21	-4.18	-0.32	-1.31	-0.36	-0.88	1.6
Bradi2g00817.3	-1.46	-1.23	1.39	-0.02	-0.02	0.33	-0.81	0.03	-0.15	-0.21
Bradi2g04380.1	-5.8	-5.97	1.29	-0.17	-0.24	-0.35	-0.2	0.13	0.06	1.0
Bradi2g14760.1	-6.24	-	1.93	-0.38	0.0	0.26	-1.88	-0.27	0.34	-0.24
Bradi2g21473.2	-	-	1.84	-0.53	-1.3	-0.04	-0.39	-0.14	0.54	0.28
Bradi2g30380.1	-5.56	-5.73	2.0	-0.27	-0.87	0.02	-2.63	-0.54	-0.29	0.93
Bradi2g33270.4	-2.06	-1.86	1.42	-0.77	-2.86	0.63	-0.04	0.48	-0.44	0.52
Bradi2g36497.7	-0.85	-1.05	1.17	-0.32	-1.23	-0.58	-0.27	0.2	0.34	0.66
Bradi2g38130.1	-4.58	-4.98	1.59	-1.19	-1.29	-0.81	0.0	0.39	0.45	0.87
Bradi2g38330.2	-0.66	-0.62	1.12	-0.02	-0.41	-0.21	-0.38	0.11	-0.06	0.18
Bradi2g42761.1	-0.7	-0.28	1.05	-0.52	-	-0.62	-	-0.2	0.62	1.45
Bradi2g43857.1	-	-	0.62	1.03	-	-	-0.14	0.01	0.42	1.66
Bradi2g47230.1	-1.06	-1.23	1.83	1.33	-2.16	-	-	-1.15	0.48	-0.08
Bradi2g50237.1	-0.72	-0.72	1.11	0.24	0.08	-0.08	-0.41	-0.12	-0.27	-0.1
Bradi2g56000.1	-5.55	-5.81	1.77	-0.58	-0.12	0.09	-0.72	0.12	-0.24	0.43
Bradi2g60790.1	-0.74	-0.83	1.28	0.83	-0.35	0.08	-0.26	-0.39	-0.74	-0.75
Bradi3g07660.1	-0.83	-1.05	1.54	-0.11	-0.0	0.46	-0.24	-0.47	-0.23	-1.63
Bradi3g09736.6	-0.77	-0.98	1.75	-0.01	-0.35	-0.03	-0.41	-0.43	-0.49	-0.79
Bradi3g19202.2	-3.51	-2.68	2.09	0.01	0.2	-2.04	0.16	-0.35	-0.45	-1.13
Bradi3g19936.1	-0.66	-4.13	1.84	0.59	-1.55	-1.3	-2.61	-0.33	0.35	0.31
Bradi3g31865.1	-	-	1.94	0.14	-0.36	0.25	-0.27	-0.12	-0.7	-0.44
Bradi3g38450.1	-2.5	-2.66	1.35	0.32	-0.02	0.6	-0.79	-0.1	0.13	-0.4
Bradi3g42720.2	-3.88	-2.67	1.47	0.46	-0.57	-0.7	-0.6	0.19	0.39	0.3
Bradi3g44485.1	-11.19	-12.57	2.16	-1.24	-0.59	0.06	-0.01	-0.19	-0.11	-0.72
Bradi3g46640.1	-	-	1.88	0.81	-0.02	-0.02	-0.89	-0.22	-1.12	-0.42
Bradi3g52170.1	-3.61	-3.56	1.86	-0.03	-0.8	-0.36	-1.82	-0.53	0.02	0.91
Bradi4g00887.1	-	-	2.62	-	0.05	0.66	-	-0.93	-	-0.45
Bradi4g01480.1	-2.46	-1.7	1.29	-0.9	-2.57	0.54	-0.65	0.95	-1.07	0.9
Bradi4g05390.1	-1.95	-1.69	1.24	0.2	0.06	0.12	-0.2	-0.13	0.17	-0.18
Bradi4g10062.1	-	-	2.52	-	-	-	-	-	-	2.09
Bradi4g10672.1	-1.91	0.24	1.62	-0.4	-	0.15	-	0.18	-0.59	0.87
Bradi4g13240.3	-2.81	-2.65	1.39	0.62	-0.93	-0.44	-0.97	0.15	0.49	0.33
Bradi4g15773.1	-1.88	-5.04	2.51	-1.36	-1.12	0.04	-0.21	-1.37	-0.86	-1.59
Bradi4g16060.1	-3.73	-5.48	2.25	1.06	-1.29	0.36	-0.65	-1.49	-1.67	-4.34
Bradi4g16260.4	-0.7	-0.67	0.53	0.23	-0.09	-0.18	-0.1	0.05	-0.01	0.44
Bradi4g16540.1	-0.53	-0.13	0.81	0.2	0.09	-0.06	-0.11	-0.34	-0.16	-0.25
Bradi4g20840.1	-0.28	-0.43	1.06	0.38	0.16	0.13	-0.98	-0.53	-0.4	-0.21
Bradi4g26850.1	-0.44	-0.35	0.73	0.31	0.14	0.14	-0.76	-0.19	-0.34	0.16
Bradi4g27715.1	-6.71	-6.63	2.12	-1.74	-0.45	-0.47	-0.93	-0.02	0.07	0.39
Bradi4g27720.1	-4.87	-5.73	1.83	-1.3	-1.77	-2.23	-0.19	0.43	0.61	0.78
Bradi4g34070.1	-0.75	-0.7	0.94	0.18	-0.09	0.12	-0.25	0.0	0.16	-0.4
Bradi4g42756.3	-2.31	-2.44	1.47	0.31	-0.01	0.17	-0.04	-0.24	-0.29	-0.23
Bradi5g01167.2	-1.81	-1.98	2.23	0.08	-0.29	-0.11	-1.04	-0.97	-0.59	-1.68
Bradi5g01370.1	-6.93	-	1.64	0.76	-1.6	-0.93	-1.13	0.32	0.46	0.32
Bradi5g02760.5	-1.9	-	1.31	0.66	-	-0.83	-0.55	0.6	0.42	0.66
Bradi5g02770.1	-	-	2.48	0.91	0.77	-1.2	-	-	-	-1.3
Bradi5g08235.3	-1.02	-1.04	0.51	0.04	0.1	-0.33	-0.16	0.07	0.2	0.68
Bradi5g09640.2	-0.74	-1.13	1.77	-0.02	-0.52	0.37	-0.62	-0.46	-0.32	-1.41
Bradi5g15104.18	-0.15	-0.17	0.73	0.53	0.12	0.17	-1.35	-0.56	-0.24	-0.03
Bradi5g15580.1	-3.72	-3.47	1.43	0.64	-0.15	0.39	-0.34	-0.25	-0.23	-0.17
Bradi5g19400.4	-10.91	-8.75	2.09	1.32	-0.17	0.15	-1.67	-1.19	-1.64	-2.48
Bradi5g22620.1	-1.0	-0.07	1.29	0.5	-0.15	0.04	-0.43	-0.33	-0.71	-0.72
Bradi5g23340.3	-3.6	-3.73	1.71	-0.68	-1.46	-1.27	-0.35	0.39	-0.21	1.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.