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Heatmap: Cluster_245 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-3.8 -3.69 0.59 0.92 -1.66 -1.57 -0.06 0.55 0.41 1.03
-2.72 -1.8 -1.61 1.05 -2.59 -2.47 0.34 0.84 0.61 1.15
- - 0.55 1.12 -1.85 -2.14 0.24 0.5 1.09 0.18
-0.21 -0.11 -0.2 0.24 -0.15 -0.44 0.03 0.2 0.23 0.24
-0.76 -0.71 0.25 0.76 -0.51 -0.52 0.31 0.19 0.1 0.09
-4.24 -4.41 -0.18 0.67 -2.22 -2.6 0.8 0.51 0.98 0.93
-2.49 -0.66 0.49 0.97 - -1.84 0.44 0.33 0.53 0.57
-0.84 -0.64 -0.22 1.42 -2.09 -2.07 -0.0 -0.11 0.33 0.69
-1.53 -1.54 -0.39 1.13 -0.81 -1.44 0.33 0.39 0.3 0.69
- - 0.33 1.17 -1.84 -1.14 -0.64 0.89 0.27 1.04
-1.32 -1.16 0.03 1.08 -1.84 -2.37 0.65 0.31 0.35 0.56
-1.05 -0.99 0.16 0.71 -0.45 -1.03 0.61 0.41 0.34 -0.12
-0.77 -0.86 -0.04 0.89 -0.99 -1.11 0.75 0.5 0.29 -0.42
-2.51 -2.6 -0.37 1.26 -1.42 -1.86 0.58 0.91 0.27 0.34
-0.83 -0.8 -0.04 0.91 -1.0 -0.97 -0.27 0.29 0.63 0.49
-0.72 -0.45 0.04 0.74 -0.6 -0.56 0.17 0.15 0.16 0.35
-1.12 -0.94 0.24 0.71 -0.45 -0.55 0.29 0.13 0.45 0.14
-3.84 -4.01 -0.47 0.55 -1.19 -0.94 1.15 0.3 0.57 0.84
-0.95 -0.94 -0.29 0.79 -0.74 -1.03 -0.03 0.33 0.59 0.66
-1.37 -1.27 -0.84 0.86 -0.21 -0.76 0.1 0.63 0.4 0.52
-1.48 -1.13 -0.43 1.12 -2.13 -2.23 0.16 0.85 0.84 0.16
-1.66 -1.35 -0.32 1.03 -1.39 -2.93 -0.06 0.52 1.14 0.41
-1.77 -1.69 -0.28 1.13 -1.03 -0.68 0.21 0.51 0.61 0.22
-0.49 -0.41 -0.09 0.58 -0.35 -0.31 0.3 0.14 0.17 0.08
-0.86 -0.68 -0.68 0.84 -0.88 -1.65 0.27 0.24 0.53 0.78
-0.99 -1.6 -0.3 1.01 -1.44 -0.87 0.32 0.41 0.68 0.3
- - -1.08 1.63 -1.9 -1.68 0.11 0.83 0.73 0.42
-1.24 -1.09 0.45 0.75 -0.95 -1.41 0.25 0.58 0.33 0.29
-0.52 -0.42 0.16 0.33 -0.46 -0.53 0.42 0.02 0.16 0.37
-1.18 -0.99 0.36 0.97 -0.81 -1.0 0.05 0.2 0.41 0.31
-0.76 -0.45 0.19 0.54 -0.29 -0.53 -0.13 0.35 0.29 0.21
-1.45 -1.36 0.73 1.08 -2.3 -2.09 -0.04 0.31 0.09 0.82
-0.3 -0.43 0.41 0.93 -1.07 -1.31 -0.23 -0.03 0.06 0.54
-1.31 -1.62 0.02 0.97 -2.1 -1.64 0.55 0.02 0.53 0.87
- - 0.43 1.27 -2.47 -4.25 0.71 0.53 0.7 0.38
-0.56 -0.41 0.04 1.07 -0.92 -1.03 -0.2 -0.0 0.23 0.46
-3.06 -3.09 -0.42 1.55 -0.91 -2.27 0.76 0.43 0.34 0.07
-2.58 -5.45 -0.74 1.25 -1.65 -2.3 0.56 0.66 0.64 0.76
-0.91 -0.55 -0.26 0.97 -0.57 -0.46 0.2 0.23 0.29 0.08
- - - 0.92 - - - 1.83 1.34 1.02
-1.29 -0.91 -0.13 1.18 -0.75 -1.04 0.19 0.33 0.37 0.13
-0.63 -0.45 0.23 0.77 -1.28 -1.11 0.38 0.39 0.22 0.12
- - 0.23 0.81 - - 0.98 0.09 0.86 1.15
-0.14 -0.35 0.42 0.87 -1.65 -2.72 -0.24 0.05 0.29 0.65
-8.07 -6.53 -0.78 1.71 -2.16 -2.86 0.72 0.31 0.62 0.43
-4.01 -4.14 -0.56 1.62 -1.76 -1.83 0.78 0.15 0.74 0.08
-1.26 -0.99 0.28 0.93 -1.42 -1.8 -0.61 0.54 0.47 0.85
-0.84 -0.9 0.45 0.9 -1.63 -1.72 0.2 0.48 0.49 0.14
-0.92 -1.14 -0.3 1.18 -1.86 -2.31 0.58 0.32 0.43 0.46
-3.22 -3.19 0.08 1.27 -1.45 -1.51 0.02 1.13 0.3 0.21
- -8.26 -1.36 1.56 -1.6 -1.11 0.68 0.42 0.87 0.12
-0.38 -0.47 -0.07 0.64 -0.48 -0.79 0.27 0.28 0.23 0.14
-0.68 -0.59 0.31 0.72 -0.66 -0.64 -0.11 0.17 0.32 0.32
-1.29 -1.12 -0.7 0.74 -2.34 -2.73 0.58 1.08 0.41 0.63
-3.82 -2.57 -1.07 1.38 -3.36 -4.33 -1.25 1.34 0.91 0.78
- - 0.62 1.06 -4.02 -5.2 -0.17 0.7 0.58 1.19
-2.37 -2.95 -0.19 1.4 -1.17 -1.38 0.87 0.43 0.3 -0.11
-0.84 -0.57 0.17 0.91 -1.14 -1.78 0.35 0.41 0.24 0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.