Heatmap: Cluster_162 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	sid-dev (Zhang et al., 2022)	wt-dev (Zhang et al., 2022)	untreated (Thomas et al., 2018)	treated - synthetic auxin (Thomas et al., 2018)	untreated (Wang et al., 2019)	mowed (Wang et al., 2019)	time point 1 (Ogden et al., 2020)	time point 2 (Ogden et al., 2020)	time point 3 (Ogden et al., 2020)	time point 4 (Ogden et al., 2020)
Bradi1g03760.1	-5.06	-5.64	-3.76	-0.17	-0.2	0.13	-0.92	0.4	-0.03	2.07
Bradi1g20040.1	-5.06	-5.22	-	0.23	-3.51	-3.91	-0.9	0.65	-2.41	2.66
Bradi1g31100.1	-5.02	-3.79	-0.72	0.54	-1.42	-0.34	-1.39	0.44	-0.47	2.08
Bradi1g38061.1	-	-	-	-	-	-	-	-	-	3.32
Bradi1g42737.1	-0.78	0.37	-	-1.2	-	-	-	-0.28	-	2.78
Bradi1g47256.1	-2.14	-2.3	-	-1.13	0.09	-0.34	0.22	-0.07	-0.82	2.19
Bradi1g51800.1	-6.34	-7.5	-5.61	-1.5	-5.74	-4.16	-1.1	1.0	-1.44	2.74
Bradi1g58920.1	-0.08	-0.03	-0.03	-0.33	-0.33	-0.17	-0.22	-0.03	-0.27	0.96
Bradi1g62270.1	-4.64	-3.48	-1.99	-0.4	-4.22	-2.78	-1.49	0.87	-0.62	2.54
Bradi1g64590.3	-	-4.68	-7.08	-0.15	-4.34	-3.55	-1.94	0.11	-1.28	2.84
Bradi1g65780.1	-5.42	-4.51	-4.48	-2.59	-0.12	0.84	-0.85	0.09	-1.28	2.31
Bradi1g74098.2	-	-	-	-	-	-	-	0.46	-	3.11
Bradi1g74607.1	-0.65	-1.82	-	0.6	-0.22	-2.18	-	0.07	-0.6	2.25
Bradi1g76490.5	-	-	-2.51	-1.76	-2.47	-	0.74	0.74	-2.61	2.55
Bradi2g11212.1	-	-	-	-1.31	-	-	-	-2.67	-2.84	3.22
Bradi2g11567.1	-1.33	-0.83	-	-0.6	-7.2	-6.59	-1.38	0.06	-1.6	2.72
Bradi2g18090.1	-8.05	-6.37	-7.86	-2.06	-7.29	-6.18	-1.19	0.84	-1.59	2.84
Bradi2g22727.1	-	-	-	-	-	-	-	-0.5	-1.17	3.15
Bradi2g23906.1	-	-3.63	-	-	-2.87	-3.29	-0.52	1.42	-0.33	2.46
Bradi2g28480.1	-	-	-	-	-	-	-	-0.85	-	3.24
Bradi2g33170.1	-5.81	-6.26	-8.59	-0.52	-	-6.11	-1.05	0.69	-1.79	2.78
Bradi2g35610.4	-6.62	-7.37	-4.78	-1.42	-4.49	-4.37	-0.92	0.69	-1.71	2.81
Bradi2g41530.1	-1.47	-1.04	-1.03	-0.21	0.28	0.02	-0.72	-0.11	-1.43	1.87
Bradi2g45054.1	-7.02	-6.82	-2.96	-0.61	-5.52	-3.17	-1.17	0.41	-1.27	2.78
Bradi2g48790.1	-	-	-6.96	-1.02	-6.0	-4.4	-0.78	0.22	-2.11	2.9
Bradi2g50910.2	0.17	0.12	-2.29	-0.74	-1.17	-0.32	-0.48	0.06	-0.23	1.64
Bradi3g04490.1	-2.82	-2.3	-4.58	-1.1	-6.87	-5.67	-1.29	0.74	-0.91	2.7
Bradi3g07810.1	-	-6.15	-3.91	-0.74	-4.79	-3.99	-0.13	0.84	-0.76	2.57
Bradi3g14970.1	-1.31	-1.22	-2.62	-0.62	-0.9	-0.59	-1.01	0.18	-1.04	2.33
Bradi3g15905.1	-4.92	-	-	-	-	-3.76	-0.56	-0.1	-1.01	2.96
Bradi3g17850.1	-	-	-	-	-	-	1.57	-	-	2.81
Bradi3g18637.1	-	-1.74	-1.03	0.15	-	-	-	1.24	-1.25	2.41
Bradi3g20207.3	0.07	0.17	-1.11	0.33	-1.52	-1.7	-0.62	0.14	-0.46	1.57
Bradi4g07520.1	-9.86	-9.03	-0.42	-0.9	-0.66	0.29	-0.7	0.46	0.27	1.87
Bradi4g14580.2	-1.94	-	-0.02	-	-	-0.89	-	-	-1.62	2.98
Bradi4g19525.1	-	-	-5.92	-1.41	-8.97	-7.78	-1.47	0.63	-1.36	2.87
Bradi4g39510.1	-1.27	-2.44	-	-	-0.21	-	-	0.81	-1.95	2.71
Bradi4g40948.2	-	-	-	-	-	-	-	-	-	3.32
Bradi4g42120.1	-4.55	-3.13	-4.13	-2.96	-	-	-0.2	1.04	-0.42	2.58
Bradi4g42126.2	-	-	-	-	-	-	-	0.85	-	3.03
Bradi5g00673.2	-	-5.66	-	-1.56	-	-	-0.45	-0.54	-3.17	3.02
Bradi5g07190.1	-5.3	-4.47	-3.15	0.12	-4.74	-4.31	-1.23	-0.27	-1.35	2.81
Bradi5g07910.1	-4.44	-4.42	-4.17	-1.21	-4.43	-5.27	-0.77	0.81	-1.53	2.74
Bradi5g08998.1	-	-	-	-	-	-	-	-	-	3.32
Bradi5g16250.1	-2.84	-3.0	-	-2.13	-2.33	-1.73	-1.49	0.24	-0.52	2.76
Bradi5g26964.1	-	-	-	-5.96	-	-	-0.99	1.1	-0.68	2.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.