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Heatmap: Cluster_270 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-0.6 -0.51 -1.24 -0.3 -1.91 -2.59 0.67 0.76 0.77 0.99
-0.2 -0.05 -0.07 -0.83 -0.15 -0.5 0.28 0.48 0.3 0.26
-0.14 -0.02 -0.86 -0.71 -2.38 -2.06 0.66 0.78 0.73 0.63
-0.09 -0.12 -0.8 -0.82 -1.23 -1.88 0.69 0.62 0.49 0.81
-1.54 -1.27 -0.32 -0.25 -2.61 -2.1 0.49 0.88 1.1 0.86
0.15 0.4 -1.28 -1.0 -1.9 -2.48 0.47 0.83 0.72 0.48
-1.61 -1.18 -0.42 -0.46 -0.63 -0.86 0.28 0.92 0.83 0.75
0.06 0.1 -1.14 -1.8 -3.43 -3.21 0.58 0.39 1.19 0.89
-0.59 -0.53 -0.49 0.12 -0.95 -1.28 0.36 0.56 0.5 0.79
-0.28 -0.21 -2.39 -0.66 -2.09 -2.51 0.32 0.97 0.8 1.09
0.22 0.12 -1.21 -1.07 -1.72 -1.93 0.49 0.66 0.48 0.93
0.1 0.1 -0.62 -0.45 -1.35 -1.69 0.62 0.84 0.43 0.12
0.01 -0.03 -0.39 -0.46 -0.82 -1.31 0.51 0.47 0.4 0.5
-0.15 -0.7 -1.2 -1.45 -1.61 -2.31 0.43 0.82 1.09 0.94
-0.12 -0.11 -0.59 -0.33 -1.07 -1.42 0.4 0.6 0.56 0.61
-0.09 -0.0 -0.59 -0.12 -0.02 -0.57 0.2 0.22 0.16 0.47
-0.28 0.07 -0.5 -0.39 -0.71 -0.78 0.34 0.47 0.3 0.66
0.24 -0.03 -0.83 -0.54 -1.22 -2.07 0.63 0.41 0.6 0.61
-0.69 -0.74 -2.19 -1.92 -1.39 -2.2 0.75 1.18 1.15 0.62
-0.24 -0.23 -1.56 -0.86 -1.27 -1.88 0.49 0.87 0.96 0.64
-0.92 -0.88 -2.91 -1.25 -2.26 -2.74 -0.08 1.44 0.89 1.32
-0.81 -1.28 0.16 0.22 -1.45 -2.13 0.05 0.61 0.78 0.9
-0.18 0.01 0.06 -0.04 -0.7 -0.72 0.27 0.19 0.28 0.39
0.22 -0.03 -1.43 -0.36 -1.49 -1.85 0.6 0.53 0.57 0.71
-0.66 -0.58 -0.34 -0.25 -0.5 -0.81 0.3 0.71 0.67 0.41
-0.56 -0.5 -0.02 -1.44 -3.04 -2.65 0.41 1.13 0.79 0.8
-0.4 -0.42 -0.24 -2.15 -4.45 -3.13 -0.45 1.0 1.28 1.07
-1.91 -1.89 -1.65 -0.6 -1.32 -1.45 0.11 1.39 1.18 0.81
-0.55 0.02 -0.78 -0.97 -2.5 -2.88 0.11 0.77 1.21 0.84
-0.38 -0.23 -1.0 0.02 -2.81 -3.05 0.27 0.92 0.97 0.62
-0.08 -0.07 -0.17 -0.16 -0.94 -0.87 0.14 0.42 0.63 0.33
-0.87 -0.62 -0.49 -0.89 -1.91 -2.06 0.86 1.0 0.75 0.63
-0.3 -0.38 -0.18 -0.68 -0.57 -0.53 0.52 0.38 0.42 0.55
-0.3 -0.1 -1.77 -3.13 -2.79 -3.14 0.77 0.81 1.41 0.55
-0.3 -0.72 -3.79 -0.01 -1.72 -2.82 -1.59 1.17 0.93 1.37
0.28 -0.54 -2.42 -0.6 - -2.67 0.39 0.44 1.48 0.7
-1.19 -1.3 -1.57 -1.31 -1.45 -1.83 0.54 1.34 0.97 0.87
-1.34 -1.63 -1.57 -0.87 -3.7 -3.92 0.68 0.71 1.32 1.33
-0.4 -0.79 -1.36 -1.64 -1.19 -1.65 0.13 1.22 0.52 1.23
0.15 0.14 -1.31 -0.37 -1.16 -1.89 0.28 0.54 0.64 0.73
-0.05 -0.09 -0.46 -0.13 -0.63 -0.78 0.3 0.53 0.29 0.41
-0.18 -0.01 -0.38 -0.34 -0.03 -0.62 0.04 0.29 0.45 0.41
-0.33 -0.48 -1.5 -1.27 -2.72 -3.37 1.03 0.98 1.16 0.27
-1.42 -1.4 -0.67 0.44 -1.44 -2.06 0.24 0.84 0.64 1.08
-1.59 -1.76 -0.55 -0.04 -1.14 -2.33 0.54 0.81 1.13 0.75
-1.28 -1.65 -0.62 -1.03 -1.25 -1.63 0.76 0.8 0.82 1.13
0.07 -0.05 -0.75 -0.5 -1.22 -1.06 0.61 0.55 0.59 0.36
-0.42 -0.34 -0.81 -0.34 -1.31 -1.64 0.15 0.62 0.98 0.81
-0.82 -1.6 -1.05 -0.07 -1.23 -1.03 0.3 1.03 0.97 0.61
-1.49 -1.46 -3.04 -1.96 -3.22 -3.54 1.18 1.2 1.34 0.7
-1.27 -1.58 -0.02 -3.2 -2.1 -1.34 0.84 1.05 1.03 0.71

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.