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Heatmap: Cluster_236 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
0.7 0.61 -0.49 0.28 -1.21 -1.21 0.22 0.1 -0.07 -0.19
0.58 0.45 0.31 0.37 -0.87 -0.89 -0.37 -0.23 -0.26 0.08
0.97 0.78 -0.01 0.24 -1.29 -1.28 -0.21 -0.29 -0.34 -0.21
0.73 0.57 0.09 0.5 -0.97 -1.2 -0.21 -0.21 -0.26 -0.19
0.75 0.52 0.21 0.37 -0.93 -1.28 -0.16 -0.24 -0.26 -0.14
0.42 0.39 -0.24 0.0 -0.15 -0.38 -0.05 -0.03 -0.12 -0.04
0.62 0.49 0.03 0.31 -0.56 -0.8 -0.06 -0.23 -0.22 -0.2
0.41 0.3 0.28 0.02 -0.45 -0.45 0.02 -0.18 -0.16 -0.06
0.6 0.45 -0.16 0.18 -0.66 -0.74 -0.3 0.14 -0.1 0.03
0.52 0.39 -0.01 0.2 -0.33 -0.86 -0.38 -0.02 0.08 -0.08
0.71 0.61 0.16 0.41 -1.06 -1.57 -0.4 -0.17 -0.16 0.06
0.58 0.44 -0.17 0.14 -0.44 -0.76 0.06 -0.09 -0.31 0.06
0.5 0.39 0.04 -0.08 -0.37 -0.66 0.07 -0.06 -0.08 -0.09
0.42 0.52 0.19 0.64 -1.32 -1.08 -0.73 -0.15 0.12 0.09
0.93 0.72 0.46 0.72 -2.34 -2.73 -0.34 -0.55 -0.64 -0.06
0.78 0.66 -0.12 0.35 -1.06 -1.39 -0.39 -0.01 -0.08 -0.1
0.31 0.21 0.13 0.4 -0.44 -0.66 -0.03 -0.14 -0.11 0.01
0.72 0.53 0.38 0.44 -0.97 -1.27 -0.57 -0.2 -0.33 -0.01
0.87 0.61 -0.66 0.08 -0.39 -0.97 0.03 -0.05 -0.38 -0.11
0.88 0.64 0.28 0.47 -1.18 -1.53 -0.39 -0.52 -0.54 0.09
0.64 0.4 0.21 0.41 -0.73 -1.11 -0.04 -0.22 -0.39 -0.02
0.62 0.48 -0.09 0.21 -0.31 -0.73 -0.1 -0.17 -0.21 -0.19
0.63 0.56 0.02 0.32 -0.76 -1.11 -0.11 -0.11 -0.24 -0.06
1.05 0.58 -0.04 0.19 -1.39 -1.86 -0.25 -0.07 -0.35 0.13
0.44 0.72 0.34 0.75 -2.2 -2.07 -0.13 -0.36 -0.09 -0.06
0.45 0.42 0.07 -0.19 -0.34 -0.72 0.02 0.05 -0.07 -0.05
0.62 0.37 0.23 0.22 -0.57 -0.95 0.11 -0.32 -0.17 -0.2
0.88 0.64 0.02 0.32 -0.69 -1.29 -0.21 -0.44 -0.23 -0.23
0.81 0.64 -0.01 0.07 -0.7 -0.94 -0.25 -0.27 -0.11 -0.14
0.76 0.5 0.27 0.45 -1.07 -1.28 -0.21 -0.43 -0.16 -0.11
0.91 0.76 -0.01 0.45 -1.6 -1.92 -0.24 -0.29 -0.25 -0.03
0.52 0.5 0.32 0.13 -0.44 -0.98 0.02 -0.04 -0.44 -0.23
0.64 0.43 -0.1 0.26 -0.69 -0.82 -0.17 0.06 -0.39 0.1
0.93 0.71 -0.0 0.5 -1.55 -2.05 -0.24 -0.22 -0.37 -0.04
0.92 0.76 0.09 0.28 -1.17 -1.55 -0.08 -0.33 -0.47 -0.18
0.62 0.49 0.27 0.26 -0.84 -0.86 -0.5 0.06 -0.14 -0.18
0.66 0.52 0.1 0.6 -0.98 -1.67 -0.11 -0.22 -0.23 -0.1
1.01 0.71 0.22 0.48 -1.03 -1.43 -0.42 -0.47 -0.86 -0.13
0.97 0.92 -0.08 0.75 -1.95 -2.12 -0.75 -0.12 -0.46 -0.35
0.65 0.67 0.08 0.28 -0.85 -1.1 -0.06 -0.43 -0.14 -0.09
0.41 0.44 -0.25 0.03 -0.78 -0.82 0.14 0.21 0.08 -0.0
0.92 0.74 0.26 0.54 -1.59 -1.74 -0.27 -0.42 -0.57 -0.16
0.97 0.63 -0.09 -0.25 -1.19 -1.44 0.34 -0.06 -0.23 -0.27
0.5 0.38 -0.43 0.09 -0.44 -0.52 -0.03 0.08 0.08 -0.07
0.64 0.8 0.3 0.93 -2.99 -4.37 -0.3 -0.43 -0.27 0.0
0.66 0.59 0.31 0.46 -1.28 -1.38 -0.3 -0.23 -0.09 -0.16
1.09 0.78 -0.09 0.33 -1.48 -1.57 -0.17 -0.23 -0.46 -0.34
0.66 0.49 0.21 0.7 -1.19 -1.59 -0.03 -0.39 -0.27 -0.17
0.96 1.01 0.0 0.95 -1.68 -1.6 -1.33 -0.7 -0.56 -0.36
0.77 0.58 0.2 0.51 -2.51 -2.34 -0.25 0.08 -0.3 0.2
0.47 0.31 0.17 0.27 -0.4 -0.57 -0.0 -0.16 -0.27 -0.17
0.66 0.44 0.36 0.54 -0.98 -1.28 -0.21 -0.21 -0.36 -0.14
0.87 0.55 -0.28 0.18 -0.91 -1.6 -0.1 -0.04 -0.3 0.23
0.6 0.51 -0.44 0.34 -0.64 -1.21 0.05 0.09 -0.05 -0.12
0.75 0.6 0.19 0.55 -1.45 -1.69 -0.33 -0.2 -0.17 -0.04
0.91 0.61 -0.38 0.26 -0.93 -1.18 -0.03 -0.06 -0.21 -0.22
0.81 0.46 0.38 0.49 -1.21 -1.28 -0.39 -0.23 -0.47 -0.02
0.92 0.74 0.1 0.7 -1.71 -1.97 -0.58 -0.21 -0.39 -0.17
0.57 0.57 -0.18 0.02 -0.54 -0.7 0.03 0.02 -0.14 -0.17
0.68 0.36 0.27 0.3 -0.51 -1.12 0.23 -0.26 -0.59 -0.26
0.39 0.29 0.22 0.04 -0.4 -0.5 0.01 -0.14 -0.09 -0.07
1.03 0.71 0.22 0.53 -1.4 -1.87 -0.62 -0.34 -0.54 -0.11
1.05 0.81 -0.33 0.69 -2.41 -2.53 -0.16 -0.27 -0.18 -0.34
0.62 0.52 -0.06 0.36 -0.5 -0.79 -0.38 -0.31 -0.19 0.07
0.78 0.62 -0.11 0.08 -0.68 -1.04 -0.15 -0.22 -0.14 -0.03
0.5 0.43 0.19 0.6 -0.82 -1.08 -0.18 -0.3 -0.28 0.03
0.79 0.55 0.29 0.57 -0.86 -1.08 -0.38 -0.52 -0.59 -0.08
0.64 0.41 0.29 0.16 -0.66 -1.1 0.07 -0.09 -0.32 -0.18
0.66 0.55 -0.32 0.4 -0.73 -1.2 0.08 -0.11 -0.17 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.