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Heatmap: Cluster_202 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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(Showing raw values)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
65.8 62.81 74.85 72.43 21.4 18.31 41.77 40.92 44.07 46.96
31.36 30.26 36.83 50.98 17.59 13.84 32.56 31.15 31.58 30.13
41.24 43.15 57.08 67.72 20.28 16.74 44.26 42.8 47.17 51.48
15.32 14.59 13.59 19.39 5.1 4.74 10.36 9.68 8.35 10.58
7.4 6.91 8.26 8.55 1.63 1.32 3.12 3.43 3.56 4.5
39.51 38.37 34.13 44.6 16.59 16.42 30.28 36.82 35.72 41.66
6.31 5.53 10.38 8.97 2.79 1.93 5.42 5.34 5.38 4.83
17.3 18.22 17.49 22.89 7.03 5.65 16.68 16.83 17.03 18.47
16.13 15.13 20.01 19.37 4.52 3.49 8.19 8.32 8.79 11.63
17.25 17.99 22.5 24.95 4.53 3.52 14.27 14.11 16.44 20.82
28.23 28.75 31.57 38.02 14.86 11.33 23.26 22.33 25.18 23.07
9.03 9.19 11.68 15.04 6.68 4.4 7.97 9.38 8.47 9.9
56.89 59.33 59.4 76.3 10.15 7.2 31.44 30.65 34.61 48.4
8.65 7.6 10.06 12.27 3.51 2.99 6.05 6.86 7.34 8.91
26.84 30.84 36.98 53.74 6.38 5.05 26.73 25.08 29.32 33.5
15.91 17.93 23.79 21.14 7.19 7.28 16.1 18.23 18.21 20.37
30.92 30.1 32.13 47.33 14.79 11.71 20.09 28.03 28.35 33.17
31.04 33.38 40.29 35.05 10.98 8.63 21.67 24.98 25.9 35.25
12.91 13.32 14.8 16.02 3.71 3.24 6.65 8.96 10.9 14.32
67.63 62.96 89.55 107.68 32.89 26.11 50.97 51.32 56.16 68.44
19.58 19.77 23.03 24.11 5.36 4.6 14.69 15.71 16.35 19.4
17.04 18.29 20.95 20.38 3.71 3.55 14.38 13.93 16.33 16.44
25.06 26.7 32.76 34.34 7.39 6.0 22.82 19.99 22.66 27.5
10.6 9.57 12.43 15.46 4.26 3.35 8.9 9.13 10.2 11.88
6.51 6.66 8.52 8.45 1.97 2.63 3.5 4.39 4.9 5.67
28.34 28.85 27.05 37.32 3.87 3.44 19.09 21.65 22.68 30.51
45.63 47.41 55.81 75.13 12.7 11.39 41.3 40.97 46.2 49.5
14.64 15.31 20.11 26.36 5.13 3.72 16.31 14.61 18.52 20.59
8.4 8.2 6.47 11.28 2.51 2.0 5.48 6.26 6.18 7.18
21.56 21.69 24.33 22.12 6.06 4.83 16.68 18.75 21.0 23.6
28.09 27.97 28.78 39.79 12.4 10.94 29.09 29.55 30.2 33.86
23.44 24.05 24.8 30.02 7.92 6.99 15.36 15.57 17.74 22.42
50.81 48.68 60.92 56.27 12.44 13.37 35.48 41.36 39.16 49.89
15.33 15.67 17.3 19.12 7.72 7.59 14.17 14.49 13.33 13.91
29.89 27.35 30.72 33.08 11.31 9.82 24.01 18.86 22.37 23.77
5.59 6.25 7.82 8.16 1.95 1.81 4.94 6.19 5.96 6.09
1.98 1.9 2.23 3.04 0.46 0.32 1.51 1.47 1.68 1.72
24.01 26.78 31.68 28.14 5.14 4.51 13.8 15.65 16.35 22.85
12.55 12.23 14.43 16.85 4.32 3.59 13.33 11.36 13.51 14.53
7.21 7.4 9.07 12.36 1.71 1.55 7.54 6.92 7.73 6.69
48.48 48.08 49.41 60.8 16.48 13.47 38.12 42.43 42.97 48.16
30.58 34.89 40.51 40.11 23.63 22.3 28.91 32.11 36.84 32.54
15.57 17.37 22.93 26.88 3.52 3.53 11.67 13.04 13.53 15.64
5.66 5.33 5.66 8.34 0.62 0.48 4.12 2.88 2.87 3.87
19.16 20.04 19.78 27.05 7.48 5.34 19.66 20.81 23.37 25.88
13.94 13.84 14.58 15.38 5.56 4.81 9.11 8.43 10.57 13.13
57.76 60.63 77.94 70.22 16.7 18.47 36.41 35.26 40.47 49.41
18.45 17.15 18.31 14.92 8.53 8.57 14.73 14.3 16.42 20.11
12.66 12.2 16.32 13.61 4.01 3.57 6.65 9.05 8.57 9.73
105.86 129.48 124.03 154.61 49.18 41.85 92.35 75.04 89.83 77.78
35.9 34.23 52.08 47.19 20.93 14.83 24.28 34.62 35.17 31.1
108.66 107.28 99.42 161.07 36.6 24.3 110.76 98.23 100.83 106.73
12.95 11.45 15.99 16.58 5.03 4.99 9.2 10.75 11.15 9.62
22.44 21.89 21.55 30.0 7.55 6.73 12.22 13.25 14.71 15.23
52.21 51.43 53.36 56.25 19.53 12.53 37.5 42.0 39.59 55.3
1.97 1.95 2.56 2.76 0.88 0.77 1.93 1.64 2.32 2.18
51.15 55.56 69.97 72.36 22.74 21.24 59.76 60.42 57.19 63.45
117.35 120.57 125.48 161.62 62.3 56.39 117.54 116.56 126.76 113.14
20.93 22.05 28.52 32.44 6.43 5.09 16.98 16.57 18.31 23.16
68.64 61.14 81.41 89.45 39.44 30.09 63.75 54.49 53.77 57.44
19.3 17.95 20.8 21.08 8.82 8.54 14.76 15.09 15.34 18.71
76.9 74.29 68.44 97.25 40.48 35.76 76.09 73.19 75.84 82.08
24.37 22.36 27.99 29.15 10.3 10.27 15.91 15.63 16.81 16.99
31.25 33.03 37.09 37.94 11.37 11.05 21.23 22.8 27.44 30.5
36.76 42.11 36.65 60.39 24.24 14.2 42.73 43.16 40.99 44.54
21.55 23.36 25.19 30.28 4.51 3.9 14.98 15.35 16.27 18.88
39.58 41.83 48.21 56.61 13.63 11.7 31.16 35.96 37.21 47.17
15.42 17.44 19.71 20.23 5.85 5.11 10.88 12.19 11.83 14.6
74.46 73.21 86.75 107.02 40.25 44.12 67.16 61.79 64.84 67.01
3.07 3.46 4.8 4.06 0.77 0.76 1.43 2.0 2.05 2.97
43.21 42.14 41.59 43.4 22.67 21.7 29.23 30.36 34.35 39.71
5.2 4.46 4.67 7.11 0.54 0.46 3.69 3.32 4.64 4.65
41.37 39.5 49.41 57.49 23.94 18.97 32.03 27.71 30.69 35.22
33.48 31.39 29.93 41.09 8.15 7.24 20.74 18.81 18.29 17.62
29.48 29.62 30.75 38.57 16.34 11.81 22.29 24.24 23.66 28.45
21.37 21.94 26.06 32.96 9.71 8.96 21.74 19.67 21.99 19.5
8.87 8.22 10.76 13.93 2.66 2.53 7.46 6.21 7.48 7.49
4.1 5.22 5.37 7.25 1.66 1.17 2.7 2.77 3.21 4.31
6.63 6.65 8.3 10.83 2.4 2.19 5.7 8.32 8.01 9.19
17.9 16.7 17.27 19.36 2.22 1.66 8.15 7.95 7.24 12.09
64.53 58.92 59.62 68.14 22.88 17.31 34.11 32.82 36.42 45.0
46.56 45.76 55.14 50.2 19.99 18.9 44.49 45.86 41.26 55.72
70.94 72.56 66.3 105.11 40.22 29.3 65.04 61.17 65.55 75.87
27.84 26.84 30.3 32.14 15.6 15.88 23.2 26.78 24.54 30.47
63.8 60.54 63.98 77.52 34.95 33.32 51.95 54.11 55.21 61.01
16.98 18.52 21.29 25.1 6.38 5.36 9.62 12.37 11.81 13.91
27.65 25.22 22.39 32.32 8.94 7.52 17.27 16.46 18.02 17.27
21.81 21.78 29.12 43.1 6.3 3.73 23.16 25.99 29.77 33.18
7.51 7.5 10.55 14.34 2.47 1.95 5.02 5.0 5.89 6.77
25.99 27.12 31.26 38.67 8.22 7.5 23.28 23.91 23.41 26.86
53.16 52.65 54.49 65.67 20.24 16.05 34.27 36.66 38.65 44.01
18.6 17.22 19.74 20.66 7.21 5.77 9.41 11.3 10.77 15.64
7.2 7.07 10.31 12.74 1.94 1.58 3.93 5.19 6.28 7.69
41.6 42.3 44.73 51.5 24.89 19.6 40.69 38.35 42.7 41.53
45.04 45.07 38.98 52.16 29.07 22.34 43.69 42.06 44.69 42.31
50.08 46.81 51.0 73.13 9.52 7.46 35.42 36.3 42.79 55.64
28.24 28.98 32.84 36.74 12.07 10.57 32.35 27.64 31.43 30.98
44.0 45.82 62.83 58.34 11.09 10.13 31.2 34.01 41.72 54.66
26.34 26.7 31.96 34.06 8.68 7.92 15.83 21.92 22.95 29.94
5.49 6.02 10.15 7.43 2.42 2.03 3.55 5.54 5.9 4.06
17.81 18.48 16.24 24.63 5.32 3.46 16.53 14.87 14.04 17.51
4.4 4.27 7.84 7.89 0.85 0.6 1.6 2.1 2.5 3.05
39.24 39.68 41.4 48.21 13.76 11.93 43.69 37.32 41.15 43.19
19.38 22.08 21.43 28.36 7.34 5.99 18.26 16.39 19.02 21.01
103.45 103.66 113.93 124.51 54.25 46.57 113.25 107.78 107.31 118.57
14.23 14.8 18.61 20.04 3.81 3.91 8.86 9.73 10.05 13.71
7.19 8.21 9.27 11.43 1.72 1.75 5.2 5.96 5.66 8.01
33.77 33.59 43.77 46.17 6.95 6.74 15.03 16.85 18.18 22.33
66.43 65.3 84.27 109.69 28.26 21.93 84.5 72.59 80.59 85.17
24.14 21.98 25.36 29.31 9.27 7.49 14.98 17.87 16.9 17.9
55.77 57.43 58.27 66.31 17.04 15.71 51.17 43.44 47.89 46.36
9.73 9.83 13.46 17.47 4.79 3.76 8.0 8.43 8.69 10.68
66.64 67.1 68.62 71.01 36.17 28.11 64.28 64.49 68.97 69.65
34.88 33.66 28.06 42.57 6.37 5.02 23.45 34.13 27.57 32.8
4.49 4.35 5.43 7.3 1.8 1.44 3.53 2.71 3.31 3.92
2.59 2.74 3.22 3.53 0.66 0.49 2.06 1.22 1.51 1.84
31.39 33.63 35.0 42.13 12.09 11.39 26.51 25.08 26.8 30.88
41.59 42.93 47.13 50.13 25.72 21.03 38.73 38.26 44.26 45.87
11.86 12.04 11.49 13.87 5.16 4.84 9.6 8.8 9.75 10.73
71.78 70.7 95.86 99.37 24.07 22.5 63.42 64.77 61.28 74.03
12.2 12.74 15.58 13.73 4.09 3.77 7.59 7.85 9.89 10.45
15.41 13.87 26.06 22.81 1.77 1.45 7.73 6.02 7.83 12.36
45.1 44.79 57.34 64.89 16.47 13.37 40.92 34.1 42.06 46.33
42.82 36.93 46.77 47.84 10.02 10.24 28.3 28.73 29.6 35.55
33.37 30.21 43.07 48.2 10.6 10.42 21.07 21.2 21.15 22.42
73.28 67.85 65.89 81.49 27.37 24.92 49.84 50.34 57.87 68.6
14.8 15.1 18.14 21.88 7.45 5.42 13.1 12.45 14.96 16.41
4.74 5.18 5.64 7.18 1.69 1.7 4.1 3.75 4.15 6.24
4.54 4.47 5.47 6.84 1.29 1.0 2.68 2.78 2.95 3.7
13.6 14.17 21.26 20.26 4.76 3.9 8.68 10.95 11.99 13.47
43.64 45.06 49.42 72.93 33.89 21.47 46.12 47.89 47.52 54.39
28.12 28.47 31.04 46.55 12.65 10.38 32.29 25.83 28.23 32.39
3.55 3.29 4.81 5.31 1.13 0.72 3.18 2.46 3.06 3.32
59.3 61.43 77.9 87.37 22.92 20.0 62.54 63.31 66.31 71.17
29.84 29.99 28.8 32.02 12.33 11.94 24.94 19.32 21.48 22.21
31.35 34.78 39.66 50.89 12.55 9.86 25.34 28.95 28.94 32.32
13.28 13.33 14.73 23.87 4.47 3.23 10.13 10.19 11.53 13.87
16.27 16.86 16.61 20.94 7.08 7.2 11.34 13.24 11.85 13.37
92.71 90.88 95.61 97.31 32.36 27.22 74.31 77.72 83.94 99.69
8.12 8.47 9.65 10.61 3.54 2.69 6.55 6.71 7.75 8.75
30.42 32.3 45.48 52.73 7.32 4.99 27.93 33.95 33.18 44.9
18.55 19.34 25.98 28.28 4.99 4.67 11.83 12.58 14.27 16.2
19.7 20.39 21.27 28.73 10.0 9.52 20.55 20.74 22.0 23.73
11.43 10.88 11.61 16.37 3.73 2.68 9.85 9.22 10.22 10.41
35.58 34.95 41.38 49.72 11.32 8.15 37.74 31.6 38.29 40.86
45.63 46.03 52.69 59.54 22.17 18.43 44.94 41.46 48.02 50.89
11.43 10.93 14.44 13.4 3.36 3.07 8.01 8.16 8.15 11.44
5.55 6.42 6.81 9.49 2.2 1.98 5.63 4.88 4.89 4.89
23.54 22.98 25.55 34.76 6.43 4.74 22.93 20.11 22.28 22.64
37.79 40.02 45.42 56.15 16.89 12.51 42.24 40.7 47.97 42.3
37.47 30.55 38.87 40.67 9.04 8.41 21.71 19.56 18.69 23.82
19.64 19.42 19.31 23.95 8.7 7.6 11.17 13.06 14.52 15.3
14.98 17.03 18.38 23.08 3.64 3.34 11.84 12.4 12.35 13.81
35.74 33.57 40.54 40.39 17.07 16.37 29.23 31.51 33.05 40.03
21.67 19.99 27.7 25.77 7.63 6.52 16.33 14.68 13.88 16.55
17.95 16.11 17.35 23.46 7.55 6.49 14.54 13.91 16.92 17.54
32.38 30.3 31.91 36.04 6.88 6.43 18.31 17.65 17.68 21.78
9.93 9.64 8.61 11.46 3.37 3.33 6.59 7.26 7.28 7.26
22.26 24.29 28.83 36.91 9.38 7.25 24.67 20.82 22.99 20.55
9.0 7.92 9.52 10.55 2.05 1.91 4.58 4.52 4.49 5.25
34.42 36.67 45.78 44.43 15.53 15.68 29.88 36.53 38.15 38.3
11.71 11.62 15.93 20.62 2.21 1.75 7.16 6.75 7.62 8.96
5.02 5.8 4.42 6.46 0.71 0.54 3.95 2.87 3.93 3.94
26.81 24.37 28.56 36.44 8.0 5.59 17.44 17.81 18.06 21.9
14.79 14.5 12.89 13.98 3.97 3.39 12.18 10.25 11.26 11.02
20.44 22.25 20.31 25.88 9.76 9.35 16.17 18.11 17.71 18.44
6.66 7.28 9.52 11.96 1.78 1.86 4.9 4.8 5.87 5.97
13.73 15.36 21.57 19.82 6.42 6.08 13.98 15.14 15.53 18.38
27.03 24.5 35.65 29.62 4.88 4.49 13.21 14.02 15.51 19.55
27.69 27.81 42.38 51.28 10.16 9.49 25.45 23.57 24.78 29.84
29.83 29.58 27.54 36.48 13.35 11.88 26.54 25.61 26.52 28.53
6.26 7.43 8.49 8.2 2.11 2.46 5.57 4.93 5.07 4.67
62.32 57.36 53.22 68.75 27.09 23.32 54.14 47.06 45.54 48.59
26.14 27.05 43.05 58.93 10.28 7.44 37.13 32.64 36.37 37.58
142.62 150.18 149.37 184.39 61.03 47.66 122.77 125.96 143.83 158.85
15.8 16.83 20.68 26.47 3.63 3.29 13.07 14.35 16.54 17.76
37.34 40.88 47.13 47.07 13.41 11.98 38.91 38.99 37.89 34.75
11.05 11.9 14.34 15.91 4.72 4.9 14.44 11.99 12.61 13.16
10.6 11.05 13.53 16.56 3.58 2.82 9.83 8.13 8.68 9.3
29.4 30.12 38.55 42.97 14.86 12.45 31.7 29.77 32.32 30.35
31.71 31.9 39.66 42.16 10.89 8.84 20.43 26.59 27.87 32.09
23.53 18.71 27.39 24.33 4.53 4.14 11.3 17.11 15.7 19.81
15.71 15.77 20.0 18.43 3.75 3.27 11.15 11.71 11.77 16.34
26.65 27.06 26.47 38.78 4.41 3.54 16.45 14.99 17.85 22.04
68.5 65.72 76.81 82.87 31.18 26.88 46.95 54.36 59.27 64.98
27.07 27.37 28.67 31.02 13.59 12.25 24.76 23.75 25.77 27.75
19.38 20.03 27.37 36.09 3.12 2.75 13.58 13.84 15.82 20.67

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)