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Heatmap: Cluster_186 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-2.29 -2.61 -1.0 -0.52 -0.89 -0.36 0.5 1.13 0.8 0.83
-0.27 -0.44 -0.97 -0.37 -0.19 -0.74 0.17 0.71 1.01 -0.16
-6.48 -7.52 -3.21 -1.18 -1.81 -2.1 -0.36 1.42 1.52 1.37
-1.24 -0.75 -1.13 -0.06 0.0 -0.57 0.44 0.61 0.74 0.42
-3.26 -4.01 -0.84 -3.19 -1.66 -1.84 0.6 1.38 1.71 0.24
-6.39 - -2.41 -0.99 -2.43 -2.56 0.51 0.94 1.73 1.2
-3.06 -2.71 -3.92 -0.4 -0.9 -1.66 0.41 1.13 1.28 1.08
-4.29 -5.07 -1.19 -2.32 -4.37 -2.6 1.05 1.04 1.31 1.3
- - -1.59 -1.54 -3.85 -1.68 1.13 1.47 1.79 -0.96
-3.27 -3.42 -3.46 -1.71 -2.01 -2.73 0.24 1.26 1.56 1.31
- - - -1.97 -5.76 - -1.12 1.48 2.41 0.23
-1.11 -0.98 -1.12 -2.23 -2.11 -1.05 -0.63 1.19 1.54 0.85
-3.89 -3.43 -0.09 -0.67 -0.82 -0.87 0.89 0.75 0.85 0.87
-2.77 -3.64 -1.02 -0.3 -1.64 -1.69 0.14 1.0 1.44 1.01
- - -3.58 -0.96 -1.19 -1.89 0.2 1.33 1.54 1.1
- -4.5 0.13 -2.77 -1.46 -1.6 -0.32 1.13 1.53 1.1
-5.63 -5.75 -0.34 -1.22 -2.06 -3.26 0.3 0.92 1.45 1.35
-5.92 -7.09 -1.12 -0.38 -0.75 -1.77 0.34 1.06 1.18 1.16
-7.87 - -6.74 - -2.52 -1.65 1.18 0.75 2.42 -2.3
-4.37 -3.85 -0.5 -0.38 -1.23 -1.66 0.12 0.88 1.39 1.08
-1.71 -1.51 -0.21 -0.28 -0.69 -0.39 0.35 0.7 0.78 0.72
-5.51 -4.21 -1.33 -4.18 -1.91 -2.15 1.28 1.37 1.74 -0.64
-1.79 -1.57 -4.72 -3.94 -1.69 -0.25 0.37 1.03 1.57 0.86
-1.98 -1.81 -1.42 -0.56 -0.8 -1.11 0.73 1.06 1.04 0.65
-2.55 -2.74 -1.2 0.41 -1.15 -0.76 0.16 1.13 0.9 0.77
-1.31 -1.54 -1.34 -0.28 -0.99 -1.02 0.48 0.9 1.19 0.59
- - - - - - - 0.8 2.96 -1.01
- - -1.29 -1.12 - -3.2 0.07 0.93 2.37 -0.13
-4.14 -4.31 -0.83 -0.9 -1.87 -2.16 0.49 1.14 1.35 1.1
-3.7 -4.3 -4.04 -5.18 -2.4 -4.03 1.63 0.81 2.1 -1.29
-2.6 -2.76 -0.5 -0.09 -0.85 -2.61 0.44 1.16 1.2 0.52
- -5.62 -1.3 -1.53 -1.35 -2.01 0.54 0.97 1.48 1.26
-1.21 -1.33 -0.78 -1.18 -0.28 -1.52 0.73 0.68 1.24 0.43
-2.55 -2.3 -1.1 0.3 -0.27 -1.06 0.17 1.04 0.85 0.71
-2.99 -4.12 -1.19 -0.98 -1.81 -2.16 0.43 0.84 1.75 0.89
-1.37 -1.53 -0.25 -1.07 -3.35 -2.8 0.52 0.78 1.21 1.16
-6.27 -7.81 -2.78 -2.15 -4.09 -4.02 0.89 1.44 1.88 0.32
-3.52 -2.37 -0.24 0.03 -2.45 -2.84 -0.0 1.06 1.16 1.15
-3.01 -2.38 -1.59 -3.47 -1.4 -0.65 1.08 1.37 1.1 0.47
-2.73 -3.94 -2.09 0.0 -1.77 -2.14 0.26 0.91 1.29 1.32
-10.17 -10.33 -0.23 -2.05 -0.74 -0.29 -0.54 1.16 1.27 1.11
- - 0.1 -1.48 -2.9 -3.29 1.05 1.15 1.4 0.48
-1.98 -1.41 0.08 -0.44 -3.98 -1.98 -2.22 0.91 2.1 -0.16
- - - - -0.05 -1.03 0.22 -0.05 2.28 0.66
-5.09 -4.46 -2.35 -1.46 -0.22 -1.43 0.77 0.99 1.32 0.95
-4.67 -4.6 -3.87 -2.25 0.01 -1.92 0.84 0.93 1.38 1.05
-1.48 -1.17 -3.07 -1.3 -1.6 -2.37 0.38 1.26 1.54 0.61
-6.01 -6.18 -0.64 0.16 -0.49 -1.55 0.77 0.97 0.91 0.68
-5.83 -8.0 -0.28 -1.55 -0.2 -0.68 -0.22 0.82 1.57 0.77
-1.55 -1.5 0.06 -0.39 -0.21 -0.62 0.67 0.88 0.45 0.23
-2.21 -2.31 -1.02 -1.21 -2.27 -2.69 0.99 1.3 1.11 0.76
-6.91 -7.08 -1.94 0.28 -1.41 -0.9 0.25 1.32 1.32 0.51
-6.1 -5.53 -5.11 -1.56 -1.73 -3.39 0.15 1.61 1.35 1.32
- - -1.2 -1.55 -2.33 -1.61 -2.07 0.72 2.17 1.22
-3.61 -3.32 0.06 -1.28 -0.83 -1.01 0.58 1.02 1.17 0.62
-4.66 -4.98 -3.2 -0.4 -1.43 -1.77 0.07 1.23 1.68 0.85
- - - - -1.77 -3.62 0.04 1.12 1.74 1.62
-1.2 -0.78 -0.77 - - - - 1.76 1.29 1.36
-4.56 -3.31 -1.64 -2.77 -2.29 -1.01 -2.47 1.08 2.6 -1.63
-4.49 -4.93 -3.94 -1.55 -0.23 -1.35 0.39 1.42 1.29 0.88
-7.07 -8.82 -0.95 -2.15 -1.44 -0.85 0.47 0.95 1.32 1.32
-3.41 -3.87 -2.67 0.34 -1.74 -1.77 0.63 1.07 1.51 0.41
- - -2.55 -3.2 -4.21 -4.88 1.14 0.65 2.18 0.39
-0.86 -0.57 - -3.28 -3.4 - 0.48 1.54 1.85 -0.57
-2.79 -2.99 -3.61 -0.35 0.28 -0.67 -0.27 1.14 1.11 0.87
-4.21 - -0.56 -2.93 -2.02 -0.41 1.13 1.45 0.92 0.42
-0.66 -0.59 -0.1 -0.83 -0.27 -0.59 0.29 0.62 0.46 0.65
-4.63 -1.99 -2.73 -0.16 -0.41 -1.27 1.05 0.66 1.26 0.53
-3.93 -4.24 0.02 -1.49 -0.5 -0.2 0.4 0.82 1.55 -0.11
-5.47 -8.81 -2.4 1.03 -0.65 -1.91 -0.68 0.89 1.19 1.06
-1.86 -2.55 -3.01 -0.33 -0.8 -1.54 -0.12 0.55 1.46 1.37
-1.05 -1.04 -1.32 -1.55 -0.58 -0.62 -0.38 1.02 1.34 0.71
-5.92 -7.28 -0.65 -0.02 -1.04 -0.52 0.03 0.62 1.22 1.19
-7.92 -5.76 -3.2 -3.36 -5.88 -5.26 -0.0 1.3 2.09 1.01
-0.26 -0.32 -0.19 -0.1 0.04 -0.28 0.18 0.27 0.22 0.27
-3.19 -3.09 0.41 -2.77 -3.47 -3.12 0.36 0.91 1.69 0.77
-5.82 -5.95 -2.86 0.86 -1.52 -1.87 -0.3 1.25 1.43 0.59
-7.02 - -3.4 0.69 -1.1 -1.55 0.27 1.21 1.39 0.41
-8.78 - -3.12 -5.62 -4.62 -6.12 0.68 1.1 2.13 0.74
-2.74 -2.88 -0.65 -0.07 0.01 -0.59 0.63 0.54 0.85 0.72
-11.45 -10.84 -0.62 -2.21 -0.51 -1.45 0.45 0.71 1.61 1.01
- - -3.25 -4.25 -1.19 -3.24 1.22 0.72 1.59 1.21
-3.55 -3.66 0.2 -1.36 -3.29 -3.41 0.54 0.81 1.44 1.13
- -4.66 -4.07 -0.32 -1.45 -1.1 1.1 0.81 1.63 0.34
-3.92 -5.09 -1.49 -1.56 -1.22 -1.31 1.48 0.92 1.26 0.37
-2.96 -3.76 -1.04 -1.59 -2.78 -1.82 1.23 1.18 1.57 -0.03
-0.81 -0.95 -3.42 -1.96 -2.38 -2.85 -0.29 1.0 1.6 1.26
-2.85 -2.27 -2.18 -3.39 -5.55 - -0.56 1.74 1.75 0.94
-6.89 -5.48 -0.48 -0.29 -1.44 -0.87 0.18 1.24 0.96 1.06
-4.51 -6.18 -0.33 -1.29 -1.32 -0.59 0.64 1.33 0.89 0.8
-0.7 -0.61 -1.31 -1.03 -0.68 -0.99 0.26 0.83 1.05 0.74
- - - -1.73 - - 0.7 1.08 2.17 0.54
-4.27 -4.43 -2.6 -1.08 -2.12 -4.11 -0.59 0.87 1.57 1.81
- - -0.06 -2.03 -1.01 0.22 -0.29 1.3 1.49 0.07
-1.12 -1.48 -2.27 -2.6 -3.02 -2.12 0.96 0.81 1.7 0.58
-4.35 -3.71 0.11 -0.71 -0.45 -0.53 0.46 1.29 0.82 0.22
-4.64 -5.22 -2.65 -0.73 -2.51 -1.62 1.0 1.27 1.31 0.84
-3.63 -4.45 -2.58 -1.48 -3.65 -3.15 0.08 1.22 2.09 0.6
-0.77 -1.33 -8.3 -3.59 -4.43 -4.65 -1.01 1.25 1.84 1.25
-1.56 -1.59 -0.74 -0.02 -0.73 -0.57 0.72 0.79 0.69 0.57
-4.6 -4.06 0.39 -2.36 -5.45 -4.76 -0.38 0.75 2.01 0.9
-5.27 -7.44 0.44 -0.83 -0.65 -1.68 0.53 0.93 1.02 0.78
-2.2 -2.89 -0.39 -0.25 -0.27 -0.69 0.46 0.93 0.96 0.45
- - -0.38 -2.86 -1.6 -3.9 1.24 0.55 1.93 0.09
-1.95 -2.8 -0.97 -1.34 -0.73 -2.33 0.01 0.92 1.4 1.24
- - - -4.18 - - -2.96 0.72 2.25 1.77
-2.44 -2.26 -1.61 -0.87 -1.21 -1.58 0.29 1.17 1.25 1.08
-3.28 -2.36 -2.38 -3.49 -1.65 -1.49 0.99 1.8 1.1 0.19
- - -2.93 -3.4 0.59 -1.34 0.68 0.84 1.97 -0.86
-2.23 -2.23 -0.31 -2.06 -1.89 -1.9 0.51 0.92 1.39 1.04
-0.9 -1.37 -2.89 -1.15 -0.54 -0.46 0.11 0.95 1.17 0.85
-0.98 -1.12 -1.72 -0.67 -0.71 -0.9 0.79 0.88 0.89 0.62
-9.59 -11.75 -2.92 -0.64 -0.93 -1.85 -0.73 1.12 1.37 1.61
-8.87 -10.62 -2.06 -0.59 -0.6 -0.81 -0.29 1.01 1.11 1.52
-8.35 -7.94 -1.71 0.51 -1.82 -1.9 -0.02 1.19 1.36 0.91
- - -1.4 -0.92 -0.77 -3.5 0.74 1.26 1.49 0.62
-5.21 - -0.39 0.01 -0.81 -0.7 0.57 1.07 0.83 0.73
-2.13 -2.34 -0.89 -0.71 -0.44 -0.48 0.53 1.04 0.92 0.65
-4.85 -4.76 -0.92 -1.8 -0.68 -1.56 0.56 1.19 1.34 0.9
- - -3.38 -5.96 -0.62 -1.86 0.56 1.04 2.01 0.49
- - - - -8.05 - -0.91 1.36 2.55 0.06
- - - - -0.66 -2.87 0.4 1.04 2.32 -0.25
-2.95 -2.58 -2.43 -1.12 -0.74 -0.47 0.52 0.75 1.41 0.96
-2.28 -1.54 -2.61 -4.76 -1.9 -3.12 0.3 1.51 1.73 0.54
-4.42 -5.38 -1.79 -1.38 -1.39 -2.2 -0.18 1.39 1.49 1.23
-2.21 -2.57 0.08 -0.29 -1.48 -1.79 0.27 0.91 1.14 0.85
-4.01 -3.41 -1.0 -0.7 -3.72 -3.81 0.9 0.92 1.42 1.1
-1.06 -1.99 -0.87 -1.75 -1.67 -1.95 1.14 0.63 1.72 -0.29
- - -6.89 -2.19 - -5.67 -0.27 1.58 1.62 1.52
-4.05 -3.79 -2.02 -0.65 -0.57 -0.8 -0.26 1.31 1.1 1.19
-4.45 -4.95 -1.46 -1.74 -2.44 -2.81 0.76 1.03 1.34 1.42
-2.96 -3.25 -0.21 0.18 -0.68 -0.93 0.73 0.95 0.93 0.17
-2.0 -1.72 -1.53 -0.54 -3.4 -3.78 0.49 1.03 1.46 1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.