1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_106 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
0.86 0.73 -0.4 -0.39 -0.28 -0.81 -0.11 -0.26 -0.18 -0.06
1.05 1.07 -0.71 -0.29 -1.28 -2.01 -0.08 -0.09 -0.21 -0.03
1.39 1.28 -1.63 -0.04 -2.64 -3.4 -0.02 -0.42 -0.33 -0.2
1.27 1.32 -2.16 0.22 -1.65 -2.21 -0.14 -0.23 -0.23 -0.85
1.33 1.2 -2.1 0.02 -0.53 -1.19 -0.01 -0.64 -0.57 -0.96
1.27 1.23 -1.02 0.0 -3.37 -3.67 -0.13 -0.22 -0.13 -0.17
0.7 0.63 -0.46 0.04 -0.61 -0.57 0.07 -0.06 -0.13 -0.29
1.33 1.34 -2.19 0.09 -1.21 -1.89 -0.02 -0.49 -0.35 -1.03
1.43 1.48 -1.68 0.37 -3.45 -3.22 -0.47 -0.59 -0.59 -0.57
0.53 0.55 -0.25 -0.09 -0.33 -0.51 0.1 -0.1 -0.22 -0.07
1.0 0.89 -0.64 0.23 -0.82 -1.55 -0.17 -0.3 -0.31 -0.12
0.87 0.85 -1.17 -0.19 -0.81 -0.95 0.38 0.06 -0.18 -0.42
0.74 0.68 -0.28 -0.02 -0.56 -0.52 -0.16 -0.06 -0.27 -0.23
0.72 0.76 -0.54 -0.52 -0.38 -0.36 -0.3 0.08 -0.12 -0.1
1.09 0.98 -0.2 -0.57 -0.82 -0.89 -0.11 -0.45 -0.47 -0.22
1.25 1.27 -1.42 -0.08 - -6.5 0.57 -0.18 -0.25 -0.56
1.02 0.98 -0.54 0.25 -1.32 -1.69 0.02 -0.35 -0.32 -0.31
1.1 0.96 -0.55 -0.13 -1.54 -1.6 -0.22 -0.13 -0.31 0.08
1.08 0.82 -0.27 -0.24 -0.65 -0.74 -0.16 -0.27 -0.36 -0.49
1.36 1.11 -1.01 -0.6 -1.08 -1.4 -0.1 -0.35 -0.53 -0.24
1.18 1.14 -1.76 -0.35 -1.99 -2.91 0.21 -0.01 -0.05 -0.08
1.06 1.07 -0.8 0.02 -1.5 -0.91 -0.21 -0.07 -0.22 -0.58
0.48 0.51 -0.21 -0.12 -0.37 -0.73 0.12 -0.01 0.01 -0.1
2.18 1.69 -2.29 -2.12 - - -1.97 -0.5 -1.4 -1.02
1.64 1.41 -1.2 -1.44 -1.26 -1.74 -0.62 -0.33 -0.51 -0.85
1.97 1.53 -1.7 -0.35 -2.15 -3.14 -0.9 -0.44 -1.93 -2.27
1.24 1.33 -1.51 -0.25 -3.29 -4.67 -0.34 0.09 -0.13 0.04
1.56 1.28 -0.99 -0.24 -1.42 -1.95 -0.14 -0.71 -1.04 -0.63
1.48 1.32 -1.48 0.22 -4.4 -4.36 -0.37 -0.37 -0.38 -0.34
1.05 0.96 -0.6 0.04 -1.12 -1.55 -0.04 -0.31 -0.34 -0.12
1.38 1.56 -2.68 -0.08 -2.97 -3.77 -0.09 0.07 -0.41 -1.29
1.23 0.95 -0.58 -0.36 -0.75 -1.16 -0.04 -0.56 -0.34 -0.32
1.42 1.22 -0.15 -0.61 -1.57 -1.04 0.04 -1.15 -0.95 -0.69
1.32 1.14 -0.9 -0.14 -1.24 -1.61 -0.25 -0.33 -0.57 -0.31
1.24 1.21 -1.5 -0.1 -2.62 -3.49 -0.01 -0.1 -0.07 -0.11
1.34 1.27 -1.27 -0.16 -2.57 -3.08 0.07 -0.29 -0.37 -0.29
1.04 1.02 -1.0 -0.04 -1.18 -1.45 -0.06 -0.17 -0.12 -0.21
0.91 0.71 -0.85 -0.16 -0.69 -1.02 0.15 0.09 -0.27 -0.11
1.19 1.0 -1.22 -0.25 -2.09 -2.85 0.38 -0.14 -0.06 -0.12
1.15 1.16 -1.3 0.12 -3.26 -3.71 0.1 -0.06 -0.1 -0.12
0.97 0.84 -0.89 -0.21 -0.66 -1.26 0.48 -0.21 -0.34 -0.42
0.94 0.82 -0.9 -0.27 -0.76 -1.16 0.14 -0.08 -0.15 -0.07
1.1 1.26 -1.91 -0.16 -4.15 -3.89 0.33 -0.37 0.1 0.1
1.18 0.9 -0.35 0.0 -1.18 -1.53 -0.03 -0.38 -0.34 -0.41
0.88 0.84 -0.58 -0.18 -0.72 -1.25 0.03 -0.09 -0.3 0.04
0.82 0.67 -0.77 -0.24 -0.89 -1.08 0.25 0.03 0.08 -0.1
1.99 1.45 -3.31 -1.18 -5.28 -3.34 -0.82 -0.07 -0.62 -1.13
0.96 0.92 -0.64 0.17 -1.14 -1.27 -0.07 -0.18 -0.22 -0.27
1.36 1.14 -1.86 -0.37 -2.02 -2.84 0.64 -0.23 -0.33 -0.77
1.59 1.27 -0.43 -1.1 -1.38 -2.0 -0.01 -0.55 -0.74 -1.13
0.92 0.82 -0.64 -0.1 -0.71 -1.39 -0.07 0.09 -0.13 -0.22
1.18 1.05 -0.37 -0.15 -0.94 -1.01 -0.5 -0.19 -0.47 -0.6
1.13 0.95 -0.65 0.04 -1.53 -2.14 0.1 -0.34 -0.04 -0.31
0.96 0.89 -0.66 -0.33 -0.85 -1.1 0.34 -0.17 -0.13 -0.54
1.59 1.35 -2.11 -0.3 -3.73 -2.96 0.08 -0.57 -0.33 -0.61
1.04 0.93 -0.77 -0.26 -0.91 -1.06 -0.1 -0.13 -0.28 -0.12
0.57 0.71 -0.37 0.16 -0.41 -0.77 -0.02 -0.15 -0.19 -0.16
1.33 1.22 -2.11 -0.67 -2.18 -2.55 0.36 -0.02 -0.16 -0.44
1.1 1.12 -0.83 -0.16 -1.24 -1.39 -0.33 -0.19 -0.06 -0.34
1.27 1.23 -1.85 0.01 -0.89 -1.59 -0.11 -0.47 -0.25 -0.75
1.45 1.31 -1.68 -0.16 -2.39 -3.14 -0.41 -0.23 -0.23 -0.26
1.17 1.26 -1.55 -0.26 -2.54 -2.95 0.2 -0.09 0.03 -0.39
1.06 0.95 -0.61 -0.25 -1.13 -1.57 0.05 -0.08 -0.28 -0.17
1.41 1.15 -1.88 -0.5 -2.8 -4.03 0.3 -0.08 -0.18 -0.19
0.92 0.79 -0.55 -0.4 -0.54 -0.87 0.38 -0.21 -0.28 -0.46
1.54 1.45 -2.05 -0.07 -3.67 -4.12 -0.22 -0.57 -0.63 -0.24
1.21 1.12 -1.51 -0.24 -2.96 -3.51 0.26 -0.04 0.06 -0.18
1.34 1.03 -1.57 -0.04 -1.0 -1.08 0.04 -0.59 -0.56 -0.36
1.19 1.17 -1.56 -0.31 -1.57 -1.61 0.24 -0.1 -0.33 -0.41
1.21 1.24 -1.52 -0.0 -3.25 -3.83 -0.02 -0.09 -0.32 0.1
1.19 1.0 -0.65 0.2 -1.1 -1.8 -0.06 -0.4 -0.41 -0.48
1.04 0.83 -1.13 -0.45 -0.73 -1.46 0.38 -0.19 -0.07 -0.18
0.77 0.78 -0.27 -0.11 -0.73 -1.23 -0.1 -0.03 -0.12 -0.06
1.14 1.06 -1.27 -0.32 -2.7 -3.59 0.24 0.06 0.06 -0.01
1.31 1.17 -0.51 -0.17 -1.76 -2.32 0.04 -0.48 -0.27 -0.74
1.45 1.36 -1.62 0.29 -3.14 -3.25 0.12 -0.5 -0.66 -0.98
1.01 0.75 -0.25 0.09 -0.98 -1.26 -0.05 -0.29 -0.33 -0.16
0.75 0.63 -0.57 -0.3 -0.3 -0.65 -0.07 0.13 -0.26 -0.07
0.88 0.74 -0.5 -0.09 -0.87 -1.44 -0.03 -0.03 -0.14 0.07
1.59 1.4 -0.48 -0.86 -3.68 -3.48 0.3 -0.63 -0.91 -0.99
1.35 1.23 -1.6 -0.43 -2.83 -3.64 0.02 -0.08 -0.05 -0.19
1.24 1.2 -1.3 -0.31 -1.1 -1.44 0.04 -0.13 -0.34 -0.84
1.07 0.87 -0.8 -0.49 -0.44 -1.02 -0.32 -0.21 -0.15 -0.01
0.73 0.62 -0.45 -0.3 -0.57 -0.87 0.07 0.06 -0.18 0.08
0.98 0.83 -0.85 -0.14 -0.97 -1.22 -0.18 -0.11 -0.08 0.12
0.88 0.68 -0.64 0.07 -0.65 -1.08 -0.09 -0.02 -0.21 -0.06
1.25 1.39 -1.53 -0.04 -2.01 -2.55 -0.32 -0.14 -0.22 -0.51
1.3 1.22 -1.29 0.23 -1.77 -2.33 -0.41 -0.59 -0.24 -0.19
1.07 1.07 -1.06 0.42 -1.27 -1.52 0.09 -0.35 -0.28 -0.88
1.18 1.03 -1.72 -0.42 -2.24 -1.83 0.46 0.01 -0.05 -0.32
1.22 1.01 -0.82 -0.12 -0.93 -1.28 0.08 -0.3 -0.65 -0.44
0.96 0.79 -0.49 -0.09 -0.69 -0.71 -0.02 -0.38 -0.05 -0.46
1.3 1.07 -1.62 -0.12 -4.01 -4.39 0.16 -0.21 0.13 -0.01
0.96 1.08 -1.51 0.02 -1.76 -2.41 0.21 0.03 -0.01 -0.12
1.39 1.28 -0.89 -0.26 -3.21 -3.68 -0.4 0.04 -0.55 -0.12
0.97 1.32 -1.35 -0.91 -1.01 -1.48 -0.25 0.03 -0.02 -0.11
1.01 0.84 -0.98 -0.24 -1.0 -1.47 0.16 -0.0 -0.14 -0.06
1.04 0.93 -1.11 0.32 -2.84 -1.35 0.3 0.04 -0.22 -0.59
0.68 0.57 -0.24 -0.11 -0.43 -0.66 -0.11 -0.19 -0.1 0.03
1.12 1.14 -2.06 -0.03 -2.8 -2.47 -0.33 0.19 0.27 -0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.