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Heatmap: Cluster_171 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
1.04 1.22 -2.28 0.25 -1.76 -2.45 0.45 -0.21 -0.36 -0.45
0.59 0.7 -0.2 -0.44 -0.3 -0.64 0.04 -0.03 -0.06 -0.23
0.47 0.74 -0.09 -0.32 -0.74 -0.62 0.1 0.17 -0.0 -0.4
0.82 1.06 -1.89 0.26 -0.98 -1.2 0.11 -0.12 -0.09 -0.33
0.85 1.01 -0.16 -0.21 -1.72 -1.98 0.39 -0.03 -0.52 -0.2
0.89 1.37 -2.26 -1.05 -1.51 -2.16 0.78 0.01 0.12 -1.07
0.89 0.96 0.04 -0.59 -0.6 -0.88 -0.06 -0.16 -0.61 -0.34
0.46 0.44 0.03 -0.37 -0.44 -0.34 0.31 0.0 -0.07 -0.4
0.91 1.44 - -0.01 -2.71 -4.12 0.5 0.06 -0.06 -0.35
0.84 1.23 -2.41 -1.09 -1.99 -2.45 0.17 0.68 0.37 -0.42
0.83 1.5 -2.54 -0.29 -2.19 -2.56 0.56 0.16 -0.13 -0.93
0.91 1.05 -1.29 -0.56 -1.61 -1.49 0.72 -0.07 0.05 -0.64
0.53 0.64 -0.77 -0.16 -0.39 -0.71 0.01 0.14 0.17 -0.14
0.88 1.01 -1.87 -1.65 -2.11 -2.72 0.87 0.24 0.36 -0.19
0.77 1.05 -2.49 -1.17 -0.63 -1.3 0.67 0.14 0.13 -0.39
1.18 1.32 -1.68 -1.42 -2.95 -2.46 0.78 0.19 0.03 -1.49
1.18 1.19 -0.9 -0.4 - -3.3 0.53 -0.1 0.38 -1.42
0.92 0.82 -0.57 -0.18 -1.48 -1.72 -0.12 -0.04 0.12 0.2
0.79 0.92 -1.2 0.13 -3.06 -2.69 0.24 0.24 0.16 0.12
0.72 1.35 -2.36 0.09 -2.91 -2.72 0.55 0.11 -0.02 -0.46
0.48 0.7 -0.65 -0.46 -0.59 -1.11 0.46 0.21 0.26 -0.4
1.55 1.46 -1.52 -1.94 -4.05 -2.85 1.17 -2.41 -0.86 -0.94
1.05 1.45 -1.3 -0.16 -2.04 -2.9 0.46 -0.24 -1.05 -0.28
0.88 0.93 -1.43 -1.28 -0.78 -1.19 0.62 0.2 0.04 -0.45
0.71 1.23 -2.38 -0.21 -3.5 -2.13 0.54 0.28 0.52 -0.9
0.85 1.6 -1.64 -1.64 -1.5 -1.7 0.61 -0.07 -0.24 -0.86
1.06 1.3 -2.93 -2.55 -2.15 -3.41 1.02 0.17 0.01 -0.55
0.58 0.55 0.01 -0.28 -0.6 -0.74 0.02 0.04 0.11 -0.28
0.89 0.89 -0.27 -0.03 -1.67 -1.65 0.59 -0.09 -0.42 -0.57
1.06 1.42 0.37 -0.98 -3.79 -4.17 0.18 -0.35 -0.28 -0.8
1.42 1.07 -0.81 -1.72 -3.27 -3.08 1.28 -0.36 -0.86 -1.46
0.66 0.77 -0.31 -0.6 -0.7 -0.65 -0.14 0.28 0.13 -0.34
1.26 1.18 -3.22 -1.52 -3.04 -2.92 0.82 0.01 -0.05 -0.16
1.83 1.74 - - -0.81 - 1.19 -2.01 - -
0.94 1.21 -2.63 -0.09 -2.23 -2.0 0.77 0.32 -0.84 -0.53
1.45 1.35 -1.85 -2.19 -2.79 -2.2 0.92 -0.68 -0.52 -0.62
1.24 1.46 -2.36 -0.5 -1.82 -2.06 0.52 -0.42 -0.2 -1.27
1.08 1.11 -1.63 -1.71 -1.24 -1.37 0.67 0.03 -0.22 -0.29
0.87 1.29 -3.06 0.37 -1.52 -2.64 0.5 -0.18 -0.17 -0.72
0.71 0.99 -0.52 0.01 -0.59 -1.01 -0.85 0.22 0.01 -0.36
1.0 1.5 -1.55 -0.94 -1.43 -1.55 0.6 -0.25 -0.64 -0.71
0.89 1.61 -2.74 -1.58 -1.71 -1.89 1.02 -0.32 -0.32 -1.35
1.06 1.38 - -0.01 -1.67 -0.77 -1.32 0.55 0.06 -0.94
1.1 1.69 -1.49 0.16 -2.52 -3.63 0.33 -0.76 -1.03 -0.84
1.12 1.21 -1.91 -1.07 -2.05 -2.26 0.74 0.12 -0.43 -0.28
0.7 0.77 0.13 -0.44 -1.37 -0.9 0.38 -0.29 0.03 -0.35
1.23 1.31 -1.43 -0.9 -2.89 -1.82 1.06 -0.36 -0.97 -1.08
0.99 1.19 -3.02 -0.84 -3.1 -2.82 1.02 0.05 -0.09 -0.34
0.64 0.77 -0.64 0.09 -1.12 -0.98 0.14 -0.01 -0.14 0.07
0.95 1.13 -1.22 -0.65 -1.62 -1.48 0.73 0.1 -0.14 -1.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.