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Heatmap: Cluster_223 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
0.59 0.53 -0.24 0.02 0.1 -0.29 -0.08 -0.23 -0.27 -0.58
0.87 0.69 -0.26 0.64 -0.36 -0.25 -0.9 -0.68 -0.93 -0.21
0.62 0.4 -0.02 -0.37 -0.38 -0.34 0.17 -0.04 -0.31 -0.12
-0.16 0.21 0.03 0.82 0.26 -0.1 -0.5 -0.43 -0.48 -0.21
0.93 0.47 -0.29 0.39 -0.12 -0.28 -0.42 -0.43 -0.69 -0.47
0.73 0.84 0.3 0.26 0.0 -0.26 -0.74 -1.51 -1.08 -0.21
0.39 0.42 -0.38 0.74 0.11 -0.19 -0.21 -0.31 -0.41 -0.91
0.99 0.32 -0.69 1.21 -0.45 -0.18 -0.17 -2.83 -0.91 -0.63
0.51 0.49 -0.07 0.01 -0.14 -0.2 0.17 -0.3 -0.31 -0.55
0.1 0.1 -0.04 0.52 -0.04 -0.14 -0.03 -0.21 -0.16 -0.25
0.7 0.71 -0.42 0.01 -0.02 -0.31 0.07 -0.41 -0.34 -0.73
0.63 0.5 -0.13 0.3 -0.14 -0.35 -0.09 -0.3 -0.58 -0.37
0.92 0.75 0.08 0.08 -0.17 -0.53 -0.19 -0.56 -0.96 -0.6
0.6 0.41 0.01 0.33 -0.39 0.1 -0.33 -0.69 -0.42 -0.16
0.58 0.33 0.13 0.21 -0.7 -0.47 0.37 -0.29 -0.26 -0.5
0.7 0.47 0.34 0.14 -0.26 -0.39 -0.34 -0.32 -0.48 -0.49
0.68 0.38 0.37 0.28 -0.37 -0.04 -0.06 -0.82 -0.23 -1.11
0.05 -0.09 -0.15 0.46 0.22 0.0 0.07 -0.24 -0.11 -0.4
0.31 0.42 0.15 0.23 0.23 -0.37 -0.24 -0.37 -0.53 -0.18
0.85 0.99 -1.05 0.9 0.22 0.18 -0.3 -3.2 -1.35 -2.04
0.75 0.67 -0.13 0.59 0.12 -0.12 -0.25 -1.33 -0.88 -0.96
0.02 0.25 -0.36 0.63 0.16 -0.31 -0.12 -0.16 -0.15 -0.27
0.73 0.87 -0.14 0.21 -0.5 -0.43 -0.47 -0.4 -0.57 -0.25
0.79 0.6 -0.7 0.71 -0.54 0.22 -0.39 -1.26 -0.09 -0.91
0.43 0.72 0.12 0.45 -0.25 -0.32 -0.13 -0.8 -0.56 -0.4
0.69 0.55 -0.3 0.54 -0.04 -0.96 -0.63 -0.33 -0.35 -0.08
0.28 0.55 -0.67 1.06 0.46 -0.29 -0.74 -0.61 -0.63 -0.98
0.63 0.71 -0.16 0.14 -0.13 -0.28 0.24 -0.63 -0.57 -0.77
-1.1 1.21 1.15 1.63 - - -0.73 0.38 - -
0.71 0.74 -0.52 0.36 -0.02 -0.46 -0.71 -0.14 -0.38 -0.5
0.71 0.58 0.55 0.72 -0.59 -0.27 -0.29 -1.05 -1.8 -0.57
0.13 0.51 -0.13 0.39 0.32 0.33 -0.52 -0.86 -0.21 -0.64
0.73 0.87 -1.12 0.82 -0.02 -0.57 0.22 -0.77 -0.84 -1.67
0.78 0.61 0.2 0.81 0.2 -0.34 -2.18 -0.94 -0.82 -0.7
0.73 0.47 -0.03 0.63 -0.03 -0.34 -0.75 -0.66 -0.61 -0.36
1.12 1.13 -1.6 0.53 0.15 -0.8 0.12 -1.36 -1.22 -1.88
0.28 0.73 0.98 0.48 -0.39 -0.42 -0.79 -0.41 -0.94 -1.29
0.41 0.18 -0.0 -0.05 -0.28 -0.2 0.09 -0.12 -0.11 -0.05
0.24 1.07 1.12 0.44 -1.4 -0.48 0.01 -0.11 -2.61 -
0.52 -0.25 -1.21 1.68 1.37 -0.72 -2.2 -1.57 -1.85 -3.88
0.38 0.47 -0.27 -0.05 -0.37 -0.2 0.06 -0.0 -0.24 -0.0
0.61 0.36 -0.07 -0.08 -0.19 -0.17 -0.03 -0.26 -0.35 -0.11
-0.12 0.48 1.16 1.06 -1.36 -0.64 -1.51 -0.25 -0.43 -1.29
0.77 1.22 0.48 -1.43 0.64 0.12 - -1.78 -0.45 -0.91
-0.4 1.44 1.89 1.5 - - - - - -
0.09 -0.01 -0.02 0.72 0.06 -0.31 0.02 -0.3 -0.18 -0.41
0.58 0.44 -0.01 0.64 0.04 0.22 -0.25 -1.01 -1.17 -0.69
0.29 0.47 -0.55 0.68 0.28 -0.47 -0.25 -0.72 -0.35 -0.09
0.34 0.21 -0.35 0.51 0.1 -0.25 -0.01 -0.46 -0.12 -0.29
0.03 0.18 0.12 0.76 0.19 -0.49 -0.21 -0.44 -0.27 -0.35
0.55 0.5 -0.02 0.55 0.09 -0.16 -0.0 -1.45 -0.45 -0.7
0.38 0.36 0.11 0.16 0.31 -0.05 -0.54 -0.41 -0.38 -0.31
0.49 0.45 -1.25 1.19 0.17 -1.12 -0.42 -0.55 -0.18 -0.67
0.51 1.18 -0.53 1.06 0.11 -0.79 - -0.53 -0.25 -1.6
0.07 0.45 -0.81 1.26 0.59 -0.45 -0.77 -0.55 -0.61 -1.11
1.03 0.97 -0.43 0.17 -0.52 -0.77 -0.11 -0.78 -0.57 -0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.