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Heatmap: Cluster_201 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-1.43 -1.45 1.09 0.48 -0.71 -0.49 -0.3 0.22 0.24 0.34
-3.71 -4.67 1.46 0.96 -2.94 -4.37 0.45 0.49 -0.02 0.34
-2.0 -1.74 1.55 0.52 -1.88 -2.33 -0.22 -1.1 0.33 1.02
-3.62 -4.16 1.88 0.7 -1.45 -0.87 -0.1 0.53 -0.49 -0.87
-0.37 -0.28 0.64 0.36 -0.51 -0.28 -0.13 0.2 -0.05 0.01
-2.06 -1.95 1.19 0.63 -0.58 -0.3 -0.44 0.1 -0.26 0.63
-5.0 -3.58 1.59 0.36 -3.57 -2.14 1.15 1.03 -0.36 -2.03
-2.96 -3.87 1.56 0.93 -0.84 -0.75 0.16 -0.47 -0.24 0.16
-9.22 - 1.62 -0.41 -0.64 -1.33 0.1 0.45 0.07 0.72
0.21 -0.14 1.45 -1.85 -3.28 -2.66 0.94 0.58 -0.83 -0.51
-5.04 -4.88 1.7 0.67 -0.68 -0.87 -0.17 -0.07 -0.15 0.24
-8.71 -9.92 2.09 0.35 -1.75 -1.18 -0.07 0.21 -0.14 -0.48
-0.63 -0.57 1.28 -0.44 -1.29 -1.12 0.27 0.65 -0.21 0.01
-1.16 -1.0 0.93 0.32 -0.87 -0.95 0.16 0.3 0.27 0.34
- - 1.53 1.45 -3.85 -3.66 0.33 -0.07 -0.07 0.09
- - 1.41 1.0 -1.4 -1.39 -0.01 0.41 0.23 0.13
- - 1.57 0.89 -1.55 0.07 0.92 -0.51 -0.1 -2.03
-0.47 -0.68 1.12 -1.59 -2.18 -0.99 0.74 0.73 0.12 0.02
-1.22 -1.2 0.82 0.55 -0.39 -0.35 0.15 0.21 -0.02 0.15
- - 1.42 1.05 -1.38 -0.69 -0.47 0.61 -0.07 0.08
-0.76 -0.73 1.19 0.34 -0.95 -1.21 0.35 -0.06 0.08 0.02
-0.72 -0.54 0.87 0.47 -0.89 -0.42 0.06 0.3 -0.04 -0.07
-1.75 -1.56 1.45 -0.03 - - 0.82 -0.09 0.64 0.47
-4.88 -5.14 2.03 0.8 -1.41 -1.1 -0.91 -0.16 -0.48 0.17
-0.46 -0.5 0.78 0.21 -0.2 -0.36 -0.12 0.09 0.01 0.07
0.09 -0.03 0.34 -0.03 -0.2 -0.48 0.1 0.02 -0.06 0.11
-0.39 -0.37 0.48 0.21 -0.26 -0.46 0.01 0.26 -0.07 0.25
-1.63 -1.79 1.93 0.92 - - 1.32 -1.14 -1.3 -1.62
-0.39 -0.37 0.51 0.33 -0.25 -0.61 0.07 0.07 0.12 0.13
- - 1.36 0.54 -0.67 -0.97 -0.22 0.76 0.32 0.05
-1.23 -1.27 1.05 0.83 -1.38 -1.51 0.21 0.16 0.2 0.2
-1.82 -2.26 1.23 0.56 -1.77 -2.04 0.68 0.2 0.43 0.1
-10.77 -8.56 1.87 1.33 -1.46 -2.17 -0.18 -0.17 -0.43 -0.46
-1.0 -1.52 0.96 0.97 -0.74 -0.99 0.31 -0.14 0.14 -0.15
- - 1.54 0.62 -2.36 -2.43 0.06 0.51 0.1 0.71
- - 1.62 0.87 -4.07 -4.49 0.15 0.35 -0.26 0.83
-1.01 -0.57 1.32 0.21 -2.52 -1.67 0.3 0.11 0.24 0.25
-0.44 -0.39 0.52 0.4 -0.43 -0.28 0.14 0.07 0.1 -0.06
- -4.2 2.08 0.25 -2.55 -3.94 0.47 -0.88 -0.08 0.51
- - 2.61 -0.64 - -0.39 - -0.07 -0.24 -0.56
-6.88 -7.01 1.68 0.66 -1.49 -1.55 0.03 0.58 -0.18 0.14
- - 1.78 1.42 -1.01 -1.82 0.1 -0.39 -0.4 -0.96
-1.43 -1.74 1.22 0.89 -0.86 -1.14 0.08 0.18 0.0 -0.09
-3.95 -3.71 1.7 1.32 -2.54 -2.04 0.45 0.05 -0.36 -0.93
- - 1.86 1.04 -1.91 -0.34 - 0.15 0.48 -0.38
-3.56 -5.01 2.06 0.91 -0.34 -0.85 -0.72 -0.83 -0.3 -1.02
-0.56 -0.52 0.8 0.14 -0.38 -0.53 0.17 0.19 0.09 -0.02
-1.43 -1.43 0.89 0.91 -0.49 -0.31 -0.51 -0.21 -0.2 0.66
-2.75 -2.47 1.34 0.98 -1.12 -0.93 -0.51 0.13 0.07 0.4
-1.09 -0.95 1.11 0.11 -0.44 -0.32 0.1 0.46 -0.34 -0.01
-0.94 -0.83 1.48 0.26 -0.93 -0.79 0.11 0.21 -0.23 -0.43
-0.9 -0.7 1.19 0.28 -1.62 -1.27 0.31 0.16 0.2 0.14
-1.26 -1.13 0.63 0.58 -0.92 -0.89 0.15 0.3 0.36 0.47
-0.32 -0.57 0.64 0.42 0.02 -0.18 0.03 -0.0 -0.01 -0.46
-0.17 -0.18 0.68 0.42 -0.39 -0.56 -0.04 0.07 -0.0 -0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.