Heatmap: Cluster_103 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	sid-dev (Zhang et al., 2022)	wt-dev (Zhang et al., 2022)	untreated (Thomas et al., 2018)	treated - synthetic auxin (Thomas et al., 2018)	untreated (Wang et al., 2019)	mowed (Wang et al., 2019)	time point 1 (Ogden et al., 2020)	time point 2 (Ogden et al., 2020)	time point 3 (Ogden et al., 2020)	time point 4 (Ogden et al., 2020)
Bradi1g00710.1	-4.78	-6.29	-1.73	-0.95	-2.57	-2.77	-0.06	0.98	1.12	1.89
Bradi1g07060.1	-4.82	-5.81	-0.32	-0.6	-2.09	-2.99	0.19	0.87	0.94	1.7
Bradi1g08410.5	-3.02	-4.32	-0.83	-0.08	-1.34	-1.76	0.16	0.76	0.64	1.7
Bradi1g10347.1	-2.39	-2.14	-0.74	-0.69	-1.85	-1.83	0.19	0.72	0.61	1.81
Bradi1g12030.2	-4.75	-4.75	-1.45	-1.16	-1.5	-2.2	0.41	0.91	0.39	2.01
Bradi1g18281.2	-3.88	-4.79	-0.02	-1.81	-2.77	-1.38	0.61	0.84	1.02	1.46
Bradi1g20185.1	-	-	-1.11	-2.82	-1.1	-2.5	-0.86	1.71	0.37	1.87
Bradi1g22030.1	-2.44	-3.09	-1.94	-0.26	-2.58	-2.84	0.3	1.03	0.81	1.71
Bradi1g25920.1	-3.64	-	-1.6	-0.43	-2.16	-	-1.29	1.67	0.77	1.73
Bradi1g32850.1	-	-	-0.29	-1.47	-1.24	-1.69	0.15	1.15	1.03	1.44
Bradi1g33777.2	-1.04	-0.82	0.37	-0.23	-1.45	-1.74	0.06	0.62	0.41	1.15
Bradi1g34370.1	-7.28	-7.44	-0.45	0.3	-1.2	-0.82	-0.72	0.75	0.95	1.48
Bradi1g35460.2	-1.59	-0.85	0.43	-0.22	-2.12	-1.65	-0.54	0.72	0.19	1.53
Bradi1g39950.4	-0.47	-0.47	-0.39	0.03	-0.66	-1.07	0.15	0.42	0.37	0.95
Bradi1g43820.1	-2.87	-3.48	-0.58	-0.26	-0.13	-0.35	-0.29	0.58	0.68	1.41
Bradi1g44269.1	-1.23	-1.21	-0.46	-0.46	-0.54	-1.05	-0.35	0.32	0.83	1.44
Bradi1g47097.1	-	-	-0.06	-2.11	-1.63	-1.61	0.43	0.95	0.68	1.71
Bradi1g47580.1	-1.28	-1.43	-0.73	-0.95	-1.32	-1.41	0.09	0.99	1.09	1.09
Bradi1g51780.1	-0.42	-0.52	0.2	-0.86	-1.99	-2.2	0.23	0.78	0.43	1.11
Bradi1g59880.1	-3.59	-5.48	-0.87	0.03	-1.64	-2.52	-0.21	0.98	0.81	1.7
Bradi1g60750.1	-2.04	-2.31	-1.64	0.15	-0.98	-1.69	0.02	0.9	0.96	1.32
Bradi1g62810.1	-	-	-0.31	-1.67	-2.97	-2.16	-0.1	1.53	0.6	1.67
Bradi1g63550.2	-2.94	-3.81	-0.77	0.05	-2.74	-3.03	0.29	1.13	0.87	1.41
Bradi1g65530.1	-4.73	-5.19	-2.4	-0.72	-2.28	-3.29	0.18	0.92	1.28	1.75
Bradi1g66720.1	-9.7	-	-7.32	-3.09	-2.86	-5.73	-2.47	-0.5	1.62	2.52
Bradi1g67010.1	-1.28	-1.98	0.03	0.13	-2.01	-2.07	0.31	0.6	0.79	1.17
Bradi1g69870.2	-10.26	-	-0.63	-0.29	-2.14	-3.2	-0.73	0.79	1.16	1.86
Bradi1g71680.1	-1.66	-1.8	0.12	-0.51	-0.86	-1.0	0.2	0.66	0.84	1.02
Bradi1g72350.1	-3.93	-4.51	-0.23	-0.37	-1.99	-2.18	-0.23	0.95	0.71	1.76
Bradi1g74060.8	-0.92	-1.15	0.08	-0.91	-0.97	-1.1	0.01	0.95	0.54	1.04
Bradi1g74320.1	-8.8	-7.79	-3.89	-0.4	-3.7	-4.3	-0.64	0.73	1.22	2.14
Bradi1g75350.4	-9.0	-7.58	0.08	0.08	-1.75	-2.06	-0.24	0.68	0.66	1.73
Bradi1g78100.1	-	-	0.57	-3.07	-2.36	-3.24	0.52	0.73	1.08	1.53
Bradi2g00220.1	-1.51	-2.67	-2.6	-0.61	-1.4	-2.63	-0.46	0.96	1.16	1.69
Bradi2g00390.1	-12.18	-	0.09	-0.53	-0.53	-0.8	0.08	0.82	0.87	1.22
Bradi2g00881.1	-2.92	-3.93	-3.25	-0.67	-0.78	-1.42	0.05	1.27	0.67	1.62
Bradi2g06090.1	-3.06	-2.97	-0.26	0.08	-0.43	-1.42	-0.03	0.88	0.77	1.15
Bradi2g06370.1	-1.31	-1.47	-0.22	-0.22	-0.88	-0.76	-0.17	0.74	0.53	1.25
Bradi2g12150.2	-3.05	-3.56	-0.87	-0.66	-0.83	-1.14	0.2	1.14	0.78	1.34
Bradi2g19764.2	-6.03	-5.55	0.3	-1.58	-3.62	-3.28	0.56	0.86	1.18	1.4
Bradi2g20710.3	-2.55	-2.44	-0.08	-0.12	-0.31	-0.81	-0.02	0.81	0.52	1.16
Bradi2g23370.2	-4.22	-4.36	-2.13	-1.35	-2.74	-3.36	0.29	1.1	1.11	1.81
Bradi2g23660.1	-2.11	-1.88	-0.65	-2.1	-1.97	-1.13	0.19	1.04	1.06	1.4
Bradi2g26880.1	-	-5.08	-0.01	-0.84	-1.63	-0.74	-0.75	1.26	0.96	1.35
Bradi2g27987.1	-1.8	-2.28	-0.13	-1.65	-2.7	-2.87	0.41	1.08	0.88	1.43
Bradi2g37000.1	-4.81	-7.1	-0.92	-1.42	-1.47	-3.49	-0.01	1.7	0.81	1.38
Bradi2g37350.2	-	-7.46	-1.71	-0.1	-3.85	-3.23	0.74	0.85	0.42	1.91
Bradi2g41970.1	-2.26	-2.24	-0.89	-0.78	-2.1	-1.87	0.23	1.1	0.83	1.52
Bradi2g46197.6	-2.77	-3.16	-0.96	-0.12	-1.7	-2.49	0.12	1.04	0.9	1.49
Bradi2g46410.3	-2.23	-2.3	-0.65	-0.25	-0.68	-0.94	-0.32	0.67	0.82	1.48
Bradi2g47330.1	-9.08	-8.67	-1.43	-1.75	-2.1	-2.55	-0.84	0.37	1.33	2.19
Bradi2g49912.2	-4.15	-5.15	-1.49	-0.74	-1.89	-2.9	-0.08	1.14	1.17	1.66
Bradi2g53470.1	-1.31	-2.15	-0.93	0.09	-2.11	-2.41	-0.85	0.52	0.63	1.94
Bradi2g54680.1	-2.6	-2.83	-4.27	-1.25	-2.08	-3.75	-1.33	-0.1	1.79	2.04
Bradi2g54740.1	-9.48	-7.84	-1.98	0.47	-3.17	-3.43	0.25	1.14	0.77	1.61
Bradi2g61965.1	-8.11	-	0.42	-1.68	-2.42	-1.46	0.03	1.11	0.72	1.56
Bradi3g03460.1	-4.1	-5.09	-1.02	-0.59	-1.38	-1.61	0.4	1.19	0.7	1.49
Bradi3g05750.1	-3.4	-3.76	-0.3	0.06	-1.44	-1.79	0.19	0.86	0.91	1.31
Bradi3g07897.1	-1.76	-2.08	-0.17	-0.31	-1.41	-1.51	-0.06	1.05	0.63	1.3
Bradi3g08690.2	-1.35	-1.15	-0.74	-0.25	-0.79	-1.16	0.42	0.47	0.51	1.35
Bradi3g11470.5	-3.38	-4.34	-1.32	0.68	-1.82	-1.77	0.22	1.12	0.7	1.21
Bradi3g16130.1	-3.34	-3.13	0.17	-1.68	-1.33	-2.36	0.51	1.05	1.1	1.09
Bradi3g16530.1	-1.46	-1.48	-0.47	-0.4	-0.52	-1.23	-0.06	0.88	0.62	1.23
Bradi3g17208.1	-2.52	-2.24	-0.08	0.44	-1.2	-1.33	-0.81	0.44	0.62	1.59
Bradi3g18256.2	-4.79	-	0.13	-0.3	-1.57	-2.6	0.14	0.86	0.96	1.43
Bradi3g18650.1	-7.12	-7.28	-2.43	-2.39	-4.22	-4.52	0.21	1.32	0.58	2.13
Bradi3g28350.1	-3.37	-5.15	-1.8	-0.66	-2.63	-3.82	-0.26	1.05	1.06	1.9
Bradi3g30590.1	-5.79	-5.75	-1.02	-0.51	-2.27	-2.67	0.17	0.83	1.09	1.76
Bradi3g32090.1	-5.28	-4.1	-0.26	-1.67	-1.27	-2.43	0.73	1.16	1.2	0.98
Bradi3g36887.2	-1.88	-2.09	-0.85	-0.52	-1.65	-1.31	-0.36	0.82	0.4	1.87
Bradi3g37530.1	-4.69	-5.27	-0.3	-0.41	-2.24	-2.02	-0.12	0.81	0.76	1.82
Bradi3g38950.1	-	-9.9	-0.76	-1.04	-2.19	-2.76	0.51	1.23	0.88	1.56
Bradi3g39170.1	-2.38	-2.53	0.38	-1.41	-1.55	-0.99	0.44	0.87	0.92	1.02
Bradi3g39650.2	-5.22	-4.39	-1.51	-1.21	-4.77	-	0.3	1.28	0.96	1.81
Bradi3g51480.1	-3.1	-2.44	0.02	-2.1	-0.49	-2.12	0.14	1.16	0.92	1.19
Bradi3g52016.1	-4.94	-6.1	-3.15	-1.11	-2.12	-2.13	-0.08	1.2	1.36	1.64
Bradi3g52990.1	-	-5.03	-1.56	-0.1	-2.37	-1.31	-0.71	0.54	1.19	1.91
Bradi4g00805.1	-5.58	-6.74	-0.56	-1.57	-2.62	-0.72	-0.47	1.28	1.08	1.55
Bradi4g04060.2	-	-6.07	-2.62	-1.98	-	-	-0.39	1.57	0.96	1.96
Bradi4g04347.1	-	-	-2.12	0.08	-3.08	-3.61	0.02	0.97	1.15	1.73
Bradi4g07490.7	-5.04	-6.79	-1.57	-0.69	-0.97	-1.78	0.42	1.03	1.03	1.47
Bradi4g08167.2	-0.62	-0.51	-0.27	0.2	-0.86	-0.89	0.07	0.24	0.34	1.06
Bradi4g21836.1	-5.14	-6.99	-0.36	-2.69	-3.05	-3.0	0.62	1.01	0.98	1.7
Bradi4g23531.1	-3.01	-2.5	0.19	0.08	-0.81	-1.03	0.6	0.69	0.69	0.76
Bradi4g25120.3	-4.94	-5.32	-0.32	-0.69	-0.44	-0.98	0.19	0.79	0.82	1.41
Bradi4g26830.1	-2.15	-1.95	-0.7	0.05	-2.31	-2.53	0.33	1.0	0.7	1.38
Bradi4g29290.2	-4.38	-4.33	-0.08	-0.37	-1.43	-2.11	-0.44	0.97	0.85	1.63
Bradi4g30540.2	-4.62	-6.08	-1.43	-0.94	-2.7	-3.67	-0.04	1.24	1.05	1.77
Bradi4g31380.1	-6.91	-8.43	0.27	-0.62	-1.34	-1.68	0.15	1.25	0.46	1.36
Bradi4g32190.1	-7.51	-8.85	0.29	-0.99	-1.13	-0.47	0.27	0.92	1.06	0.93
Bradi4g33835.1	-	-6.17	-2.63	-0.09	-3.9	-0.98	-0.13	1.09	1.01	1.7
Bradi4g34300.1	-2.02	-2.44	0.07	-1.85	-1.85	-2.28	0.24	1.0	1.1	1.27
Bradi4g39450.1	-2.08	-1.79	-0.46	-0.45	-2.11	-2.73	-2.58	0.36	0.9	2.11
Bradi5g03778.1	-	-	-2.45	0.34	-2.77	-3.26	-0.91	0.3	1.16	2.11
Bradi5g08907.3	-2.71	-3.14	-0.63	0.41	-0.56	-1.0	-0.17	0.56	0.62	1.43
Bradi5g09090.1	-1.11	-0.77	-0.42	-0.08	-1.41	-0.94	-0.05	1.0	0.64	0.87
Bradi5g09130.1	-2.92	-3.18	-0.67	-0.21	-1.14	-1.31	0.34	1.12	0.74	1.2
Bradi5g14620.4	-4.32	-4.4	-0.14	-1.11	-2.09	-2.71	0.7	0.93	0.93	1.44
Bradi5g15850.4	-2.33	-3.05	-1.46	0.54	-1.22	-1.49	0.1	0.75	0.66	1.45
Bradi5g18640.1	-2.97	-2.74	0.54	-0.58	-1.93	-2.0	-0.04	0.71	1.13	1.2
Bradi5g19190.1	-1.09	-0.88	-0.53	-0.2	-1.71	-1.37	0.02	0.83	0.7	1.21
Bradi5g20130.1	-5.26	-5.43	-0.42	0.49	-2.36	-1.57	-0.88	0.62	0.62	1.87
Bradi5g21130.1	-	-10.47	-0.45	-2.18	-1.64	-3.19	0.01	1.41	1.01	1.56
Bradi5g27530.1	-1.59	-4.62	0.75	-1.11	-1.62	-1.82	0.59	0.72	0.36	1.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.