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Heatmap: Cluster_108 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
0.4 0.42 0.3 1.02 -1.37 -1.53 -0.5 -0.25 -0.22 -0.08
0.51 0.4 0.14 0.99 -1.26 -1.71 -0.14 -0.5 -0.13 -0.14
0.35 0.79 -0.76 1.23 -1.16 -1.82 0.13 -0.71 -0.15 -0.46
0.69 0.75 0.1 0.57 -0.52 -0.74 -0.52 -0.46 -0.46 -0.5
0.57 0.58 -0.39 1.2 -2.05 -1.87 -0.5 -0.13 -0.38 0.08
0.15 0.4 -0.21 0.6 -0.49 -0.52 -0.14 0.05 -0.22 -0.04
0.58 0.62 0.08 1.4 -2.64 -3.39 -0.45 -0.69 -0.39 -0.16
0.42 0.88 -1.0 1.45 -2.13 -2.89 -0.84 -0.41 -0.43 0.24
0.95 0.94 0.62 0.71 -0.6 -0.48 -4.07 -1.1 -0.7 -1.12
0.49 0.51 0.19 1.22 -1.46 -1.46 -0.48 -0.64 -0.3 -0.31
0.42 0.59 -0.19 0.8 -1.39 -1.45 -0.12 -0.24 -0.62 0.46
0.39 0.38 0.46 1.34 -1.76 -1.63 -1.24 -0.46 -0.32 -0.12
0.76 0.89 -0.12 0.93 -2.31 -1.37 -0.29 -0.02 -0.62 -0.78
0.06 0.51 0.8 1.63 -2.42 - - 0.08 -0.67 -0.26
0.29 0.47 0.15 0.97 -1.05 -1.1 -0.33 -0.2 -0.15 -0.29
0.9 0.79 -0.48 0.93 -3.01 -3.68 0.07 -0.29 -0.44 -0.04
0.35 0.56 -0.35 1.21 -1.96 -2.67 -0.2 -0.26 -0.39 0.33
0.52 0.75 0.29 1.14 -1.0 -1.08 -1.13 -0.84 -0.62 -0.28
0.5 0.56 -0.15 1.18 -1.39 -1.74 -0.4 -0.19 -0.15 -0.48
0.77 0.66 -0.12 1.0 -1.55 -1.87 -0.13 -0.54 -0.33 -0.35
0.16 0.33 -0.04 1.22 -1.48 -1.75 -0.38 -0.49 -0.14 0.36
0.41 0.62 0.5 1.32 -1.75 -2.26 -0.19 -0.77 -0.83 -0.5
0.65 0.58 0.07 1.28 -1.62 -2.73 -0.09 -1.45 -0.08 -0.44
0.52 0.61 -0.12 0.62 -1.37 -1.67 -0.42 -0.23 -0.08 0.42
0.71 0.61 0.5 0.63 -0.82 -1.59 -0.37 -0.4 -0.46 -0.48
0.56 0.48 0.08 0.94 -1.64 -1.76 -0.18 -0.28 -0.26 -0.01
0.71 0.76 -2.14 1.73 -2.02 -2.74 -1.39 -0.78 -0.94 0.31
0.32 0.58 0.38 1.23 -1.92 -2.44 -0.46 -0.42 -0.18 -0.31
0.34 0.75 0.13 1.3 -1.88 -2.63 -0.08 -0.85 -0.38 -0.32
0.03 0.75 0.52 1.63 -3.94 -2.76 -2.12 -0.79 -0.74 0.2
0.15 0.19 -0.05 0.62 -0.35 -0.55 -0.1 -0.2 -0.01 -0.02
0.92 0.5 0.2 1.41 -2.57 - -0.3 -0.77 -1.93 0.09
0.59 0.8 -0.45 1.55 -2.61 -3.45 -0.27 -0.56 -0.65 -0.49
0.76 0.78 -0.36 1.1 -1.53 -1.64 -0.41 -0.61 -0.47 -0.2
1.06 1.25 0.56 1.22 -1.83 -3.22 - -2.84 -0.69 -0.77
0.73 0.74 0.28 0.55 -0.43 -0.82 -1.02 -0.43 -0.56 -0.39
0.39 0.5 -0.42 1.01 -1.29 -1.59 0.12 -0.03 -0.39 -0.1
0.63 0.56 -0.33 1.28 -1.61 -1.86 -0.07 -0.4 -0.17 -0.83
0.38 0.26 0.51 1.38 -0.87 -1.68 -1.56 -0.71 -0.53 -0.03
0.01 0.1 0.23 0.48 -0.24 -0.45 0.01 -0.21 -0.2 0.07
0.64 0.52 0.15 0.82 -0.8 -0.88 -0.33 -0.66 -0.57 -0.14
0.37 0.46 0.3 0.74 -1.0 -1.23 -0.32 -0.32 -0.2 0.04
0.55 0.53 0.14 1.26 -2.59 -2.69 -0.55 -0.26 -0.29 -0.07
0.06 0.99 -0.94 1.47 -2.81 -3.11 -0.22 -0.29 -0.2 -0.2
0.39 0.71 -0.09 1.02 -4.02 -4.41 -0.35 0.07 0.06 0.15
0.37 0.26 -0.35 0.65 -0.16 -0.64 -0.22 -0.11 -0.19 -0.07
0.02 0.06 0.29 1.19 -1.96 -2.38 -0.49 -0.08 -0.31 0.6
0.64 0.81 0.22 0.38 -0.46 -0.99 -1.2 -0.18 -0.05 -0.48
0.39 0.33 0.15 0.93 -0.85 -1.07 -0.35 -0.31 -0.18 -0.14
0.46 0.67 -0.9 1.18 -2.48 -2.43 -0.06 -0.36 -0.05 0.22
0.59 0.67 -0.12 1.43 -1.65 -2.26 -0.18 -0.81 -0.59 -0.61
0.38 0.56 -0.42 1.44 -2.81 -3.39 -0.02 -0.36 -0.38 -0.02
0.18 0.07 0.1 0.46 -0.28 -0.49 -0.11 -0.18 -0.11 0.13
0.55 0.64 -0.44 1.32 -1.04 -1.54 -0.44 -0.53 -0.63 -0.26
0.16 0.14 0.46 0.64 -0.57 -1.18 -0.24 -0.48 0.03 0.22
0.65 0.79 0.36 1.34 -2.7 -3.19 -0.49 -0.66 -0.73 -0.57
0.46 0.8 0.29 0.85 -0.77 -1.28 -0.18 -0.62 -1.32 -0.1
0.39 0.27 0.3 0.83 -0.7 -1.11 0.18 -0.26 -0.59 -0.4
0.68 0.84 -0.67 1.19 -2.98 -2.77 -0.24 -0.57 -0.38 0.18
0.26 0.38 -0.07 1.01 -1.27 -1.74 -0.21 0.08 -0.07 -0.09
0.41 0.61 0.61 1.25 -2.28 -2.37 -0.02 -0.86 -1.11 -0.25
0.54 0.59 0.04 0.8 -1.36 -1.32 -0.32 -0.33 -0.04 -0.14
0.62 0.48 0.23 0.43 -0.27 -0.31 -1.12 -0.66 -0.17 -0.11
0.59 1.03 0.48 0.93 -2.61 -2.99 -0.12 -0.74 -0.41 -0.76
0.16 0.23 0.14 0.68 -0.66 -0.92 -0.2 -0.04 -0.11 0.1
0.5 0.62 0.24 1.16 -4.23 -4.61 -3.33 0.15 -0.27 0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.