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Heatmap: Cluster_152 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
- 1.57 1.16 1.32 1.2 - - - - -
1.17 0.26 -0.79 0.95 - - - 0.35 -0.83 1.14
0.32 0.26 -0.57 0.08 -0.19 -0.27 0.41 -0.05 0.04 -0.32
0.3 0.28 -0.24 0.2 0.13 -0.19 0.43 -0.33 -0.21 -0.78
1.35 0.93 - - 1.6 -1.12 - 0.27 - -0.25
1.28 0.95 - -0.68 0.19 0.52 0.28 -1.43 -0.6 -2.26
-0.27 -0.1 -0.92 0.37 0.29 0.33 0.67 -0.54 0.07 -0.7
0.28 0.04 0.25 0.19 -0.14 -0.21 0.21 -0.25 -0.1 -0.44
1.38 0.47 0.45 - -0.49 - - -0.44 -0.62 1.35
0.55 0.5 -0.28 0.17 -0.25 -0.23 0.11 -0.32 -0.24 -0.39
0.08 0.08 0.2 0.25 -0.1 0.06 0.03 -0.16 -0.11 -0.46
0.09 0.1 -0.16 0.16 -0.27 0.08 0.34 -0.11 -0.03 -0.34
0.14 0.14 -0.81 -0.25 -0.08 0.16 0.58 0.01 -0.03 -0.24
0.45 0.39 -0.9 -0.25 -0.06 -0.02 0.46 -0.1 -0.02 -0.5
0.55 0.63 -0.37 0.21 -0.22 -0.25 0.16 -0.37 -0.28 -0.65
-0.07 0.12 -0.47 1.23 -0.89 -0.78 0.35 0.11 -0.26 -0.77
1.21 1.46 -1.44 -0.4 0.19 -0.11 -3.09 -1.61 -0.42 -0.88
0.58 0.06 -0.91 0.99 -0.38 -0.78 0.29 -0.02 -0.4 -0.68
0.2 0.19 -0.32 0.22 0.18 -0.19 0.18 -0.33 0.06 -0.4
0.2 0.27 -0.32 0.12 0.03 -0.07 0.39 -0.17 -0.09 -0.62
0.15 0.17 -0.46 0.69 -0.36 -0.59 0.44 -0.16 0.05 -0.51
0.69 0.66 -0.72 0.02 -0.12 0.08 0.21 -0.46 -0.44 -0.77
1.38 0.48 0.46 -0.43 1.61 - - - -1.16 -1.33
0.42 0.28 -0.29 -0.2 0.03 0.04 0.16 -0.13 -0.23 -0.28
0.39 0.22 -0.07 -0.13 0.14 0.07 0.01 -0.17 -0.15 -0.5
0.07 0.04 -0.22 0.15 0.12 0.12 0.12 -0.13 -0.09 -0.26
0.19 0.26 -0.1 0.12 0.22 0.15 0.28 -0.26 -0.36 -0.89
0.33 0.35 -0.31 0.04 -0.14 -0.13 0.4 -0.22 -0.14 -0.45
0.54 0.35 -0.54 -0.3 0.06 0.16 0.35 -0.26 -0.27 -0.57
0.25 0.23 -0.19 0.04 0.16 0.08 0.2 -0.27 -0.19 -0.51
0.1 0.11 -0.44 -0.28 -0.04 0.15 0.19 0.08 0.04 -0.03
0.23 0.17 -0.21 -0.02 0.0 0.09 0.36 -0.19 -0.06 -0.57
-0.09 -0.03 -0.12 0.17 0.05 -0.03 0.5 -0.17 -0.02 -0.45
0.3 0.36 -0.21 0.21 -0.24 -0.17 0.33 -0.22 -0.19 -0.44
0.19 0.25 -1.24 0.85 -0.67 -1.17 0.59 0.05 0.17 -0.49
0.2 0.2 -0.12 -0.09 0.15 -0.16 -0.06 0.05 -0.07 -0.16
0.22 0.21 -0.13 0.13 -0.17 -0.19 0.32 -0.14 -0.1 -0.29
0.21 0.23 0.15 0.53 0.06 -0.39 -0.55 -0.3 -0.39 0.07
0.29 0.21 -0.02 0.24 0.14 0.28 0.23 -0.42 -0.52 -0.94
0.35 0.34 -0.19 0.12 -0.19 -0.05 0.28 -0.25 -0.15 -0.52
0.44 0.21 -0.88 0.02 0.08 0.31 0.29 -0.28 -0.26 -0.4
-0.02 0.18 -0.01 0.87 -0.47 -0.97 0.42 -0.5 0.05 -0.42
0.16 0.19 -0.08 0.09 -0.28 -0.17 0.28 0.04 -0.1 -0.23
0.18 0.17 -0.12 0.17 -0.12 0.05 0.14 -0.08 -0.13 -0.37
0.21 1.14 -0.2 -0.04 -2.14 -2.53 - 0.49 0.05 0.96
0.2 0.04 0.02 0.55 -0.12 -0.17 0.32 -0.23 -0.33 -0.64
0.38 0.36 -0.23 0.28 -0.13 -0.1 0.26 -0.35 -0.21 -0.62
0.25 0.28 0.7 0.63 -0.4 -0.82 -0.2 -0.06 -1.23 -0.24
0.28 0.16 -0.82 0.29 -0.26 -0.13 0.6 -0.16 -0.01 -0.46
0.0 -0.12 -0.36 0.31 0.03 0.01 0.4 -0.18 -0.02 -0.23
0.35 0.3 -0.52 0.01 0.09 0.08 0.14 -0.21 -0.07 -0.42
0.31 0.35 -0.42 0.21 -0.2 -0.23 0.28 -0.08 -0.03 -0.46
-0.01 0.15 -0.5 0.13 -0.27 0.39 0.49 -0.3 -0.11 -0.31
0.16 0.38 0.35 0.59 0.07 -1.68 0.42 -1.42 0.19 -0.75
0.47 0.48 -0.31 -0.09 -0.1 -0.14 0.31 -0.31 -0.13 -0.61
0.16 0.25 -0.25 -0.08 -0.09 0.12 0.13 -0.01 -0.13 -0.17
0.19 0.33 -0.96 -0.02 0.17 0.11 0.13 -0.01 -0.02 -0.28
0.44 0.29 -0.36 -0.01 0.09 0.16 0.1 -0.18 -0.36 -0.44
0.47 0.43 -0.21 -0.01 -0.14 -0.25 0.17 -0.19 -0.21 -0.33
0.03 0.26 -0.1 0.34 -0.43 -0.53 0.25 0.06 0.19 -0.39
0.16 0.16 -0.25 -0.23 -0.08 -0.03 0.24 -0.09 0.08 -0.04
0.36 0.39 -0.5 0.34 -0.23 -0.12 0.38 -0.24 -0.11 -0.75
0.49 0.45 -0.48 -0.04 -0.21 -0.31 0.38 -0.28 -0.06 -0.35
0.32 0.39 -0.65 -0.06 -0.17 0.07 0.41 -0.18 -0.11 -0.4
0.14 0.14 0.08 0.3 -0.36 -0.32 0.34 -0.12 0.03 -0.48
1.19 0.77 -1.18 -0.65 -0.61 0.02 0.58 -0.57 -0.43 -1.5
0.43 0.33 0.34 0.03 -2.47 -1.28 -0.03 0.63 -0.47 0.34
0.34 0.37 -0.47 0.01 -0.25 -0.31 0.46 -0.02 -0.09 -0.41
1.19 0.44 -2.0 1.09 0.54 -2.44 - 0.26 -0.65 -0.99
0.18 0.15 -0.05 0.09 0.04 -0.5 -0.09 0.02 -0.11 0.16
-0.03 0.06 -0.22 0.13 0.08 0.3 0.39 -0.27 -0.16 -0.52
0.28 0.13 -0.43 0.17 -0.09 0.04 0.45 -0.2 -0.15 -0.49
0.0 0.01 0.07 0.12 -0.04 -0.05 0.08 -0.2 -0.0 -0.01
0.39 0.37 -0.45 -0.21 -0.0 -0.1 0.11 -0.02 -0.11 -0.19
0.13 0.04 -0.15 0.42 -0.3 -0.21 0.52 -0.21 -0.12 -0.44
0.55 0.91 -0.69 -0.13 0.33 -0.39 -0.03 -0.43 -0.46 -0.6
1.21 0.89 -1.72 - -0.34 -0.04 0.56 -0.61 0.38 -1.55
0.58 0.14 0.29 0.41 -0.52 -0.48 -1.67 0.12 -0.55 0.44
0.5 0.56 -0.96 -0.42 -0.33 0.05 0.53 -0.15 -0.15 -0.36
0.36 0.21 -0.63 0.33 -0.17 -0.11 0.36 -0.18 -0.15 -0.39
0.73 0.84 -0.52 -0.06 0.23 -0.19 -0.47 -0.44 -0.43 -0.67
0.22 0.13 0.26 0.68 -0.49 0.2 -0.11 -0.29 -0.28 -0.98
0.23 0.26 -0.52 0.19 -0.22 -0.37 0.46 -0.08 -0.05 -0.19
0.32 0.33 -0.43 0.13 -0.33 -0.26 0.4 -0.05 -0.04 -0.4
0.17 0.16 -0.35 0.04 0.06 0.04 0.42 -0.2 -0.1 -0.45
0.46 0.25 -0.3 -0.16 0.16 -0.13 0.21 -0.21 -0.33 -0.21
0.76 0.83 -0.61 -0.2 -0.09 -0.45 0.28 -0.78 -0.35 -0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.