1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_122 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
3.21 2.88 42.28 38.33 49.7 61.39 41.95 46.22 39.83 27.57
6.13 5.86 33.99 28.87 34.58 47.91 18.58 25.62 24.68 24.46
43.5 35.68 358.11 483.76 818.21 562.39 110.52 178.89 186.38 174.33
3.63 3.56 16.79 10.91 24.29 25.68 9.97 12.92 13.58 13.72
99.52 109.77 356.95 244.38 331.61 335.81 255.25 255.76 218.03 197.26
5.32 5.75 20.7 13.27 16.64 18.09 11.91 15.2 11.24 11.37
64.22 66.23 187.75 110.3 176.13 264.69 114.62 143.12 132.88 115.86
36.84 40.44 637.74 288.75 682.98 731.03 314.8 294.63 261.58 283.52
6.85 6.94 28.27 12.77 24.85 32.66 13.84 15.22 14.32 13.07
49.21 53.15 157.84 160.65 226.11 229.29 128.65 120.12 126.58 138.88
0.03 0.0 0.6 0.06 0.45 0.67 0.12 0.42 0.16 0.17
20.22 17.63 44.83 31.27 47.47 53.83 35.66 41.31 32.23 34.14
60.29 62.04 546.77 327.44 693.95 727.84 389.43 406.6 403.51 386.11
40.17 41.23 156.45 117.13 166.51 167.3 104.06 86.33 87.34 89.43
7.53 6.87 24.4 20.65 23.21 27.4 15.15 16.16 15.53 16.41
32.18 32.55 60.82 51.33 62.01 73.71 34.08 43.56 42.38 50.66
6.19 6.45 65.26 46.5 82.68 83.65 41.74 50.6 35.4 30.34
6.94 8.02 26.82 12.96 17.18 32.01 12.7 18.2 18.11 12.73
33.25 31.76 68.43 58.47 66.13 83.98 56.03 45.4 54.85 41.99
25.39 27.07 307.66 202.99 298.96 536.21 194.79 184.88 150.54 161.57
8.27 9.84 55.34 23.71 38.55 55.62 22.17 29.24 29.84 24.74
0.0 0.0 345.7 102.52 536.69 601.28 292.69 278.2 238.19 114.37
0.26 0.53 8.53 10.12 9.39 9.72 6.95 7.38 6.4 4.24
0.17 0.15 54.7 17.69 22.89 59.35 28.65 33.73 30.17 19.05
46.41 49.46 149.0 95.69 140.28 143.82 118.13 112.21 106.55 90.3
5.24 5.39 24.81 13.21 23.1 25.21 19.15 19.83 18.28 13.91
27.7 25.8 267.51 259.23 367.46 382.68 212.25 224.32 204.99 180.19
7.4 6.79 79.28 60.47 111.03 132.18 42.35 52.58 43.77 53.91
0.81 0.32 258.08 294.06 863.49 854.74 245.27 240.75 173.34 167.16
0.42 0.4 5.15 5.68 13.0 12.79 4.04 4.5 3.85 3.12
1.99 1.67 7.74 3.86 6.64 7.46 4.52 5.13 3.66 4.42
44.74 44.19 321.95 219.7 389.02 430.52 199.77 207.64 188.52 202.59
14.8 16.42 48.26 42.52 52.29 64.92 44.44 37.5 37.54 35.92
5.58 5.82 25.87 26.51 40.76 46.13 27.72 25.39 25.84 19.35
33.78 33.42 331.03 193.53 369.64 330.53 148.76 176.89 185.21 206.16
12.5 11.26 49.46 34.21 49.1 56.72 29.18 36.88 31.2 30.59
55.06 57.17 183.44 150.09 195.81 271.73 171.0 147.93 119.43 106.67
0.3 0.32 49.71 22.86 54.37 74.36 15.95 30.11 20.76 21.1
0.72 0.27 25.28 14.65 20.41 20.98 9.8 14.23 11.81 9.34
24.13 25.01 209.54 162.68 231.81 249.91 91.07 130.89 110.87 128.04
144.74 141.95 474.99 409.43 565.38 649.16 296.06 373.28 322.25 413.28
90.12 81.05 301.73 231.86 268.2 285.96 227.37 260.13 255.5 186.49
5.16 4.7 13.52 11.84 16.98 15.84 6.62 8.26 7.41 8.1
44.42 46.27 113.07 106.55 113.62 107.53 95.9 105.61 91.2 87.96
40.99 44.36 143.88 158.0 160.32 164.9 89.78 78.86 80.24 97.82
57.63 54.71 134.12 136.59 156.7 164.83 97.89 109.34 111.22 107.57
48.22 46.58 163.2 125.33 174.54 170.64 96.22 107.62 106.75 118.03
26.75 26.0 157.84 99.66 140.74 183.28 86.29 106.15 95.05 103.45
34.43 37.62 113.58 138.7 199.09 218.96 93.1 99.76 95.9 82.73
24.53 27.3 40.05 34.01 40.46 41.42 34.15 37.37 36.98 32.56
36.82 33.94 209.07 128.45 173.62 212.78 90.82 118.99 107.52 121.91
13.13 14.44 59.55 45.08 86.23 85.29 38.63 43.27 43.17 44.2
1.24 1.32 89.58 61.25 104.79 106.43 68.7 88.82 67.52 39.21
27.01 27.43 124.19 124.66 143.4 152.51 127.85 97.71 122.75 82.48
5.68 4.82 47.15 52.32 143.9 93.56 36.74 42.14 39.51 21.45
3.88 4.68 19.67 20.93 28.43 32.24 12.03 17.47 14.52 16.05
49.02 48.69 139.25 136.77 142.0 160.18 104.39 102.51 96.86 86.08
0.0 0.0 0.0 0.2 0.19 0.19 0.05 0.0 0.0 0.0
16.32 16.97 91.38 87.96 122.53 118.44 61.53 54.87 52.19 50.13
2.09 2.38 68.92 44.04 69.45 52.82 23.3 30.44 29.9 31.84
0.22 0.26 43.27 25.18 32.83 48.92 19.32 30.53 18.25 20.61
9.9 10.66 82.53 64.17 80.68 75.4 39.72 40.73 37.21 42.96
347.74 361.12 1140.75 908.84 1612.05 1769.78 962.4 1018.9 978.15 1034.15
0.49 0.55 8.95 6.93 9.74 12.28 3.03 4.0 3.43 6.12
9.78 9.92 79.91 84.51 79.14 93.58 60.37 55.4 49.72 43.45
2.89 2.58 115.42 48.32 139.79 195.53 64.98 91.06 62.88 54.78
0.26 0.15 5.62 3.33 7.51 6.8 1.99 3.68 3.97 2.77
1.91 1.44 5.89 2.79 5.94 7.86 5.42 4.87 3.45 2.42
8.99 8.72 60.29 60.39 111.71 122.99 44.15 57.97 48.53 62.56
0.56 0.11 0.76 1.04 1.68 1.51 0.0 0.22 0.27 0.46
36.0 38.91 116.92 102.64 153.64 155.29 58.27 78.72 78.08 75.28
42.16 41.6 128.33 85.37 102.89 118.69 85.97 90.84 78.08 90.6
0.32 0.24 70.12 24.53 42.75 71.2 16.64 28.55 25.04 37.1
0.52 0.47 25.21 22.15 20.02 28.32 14.53 20.14 17.23 11.61
26.36 28.21 146.68 109.27 175.72 222.84 100.23 91.33 94.22 85.73
24.03 23.97 107.08 94.95 125.98 151.81 63.87 55.16 54.24 50.29
13.79 14.41 72.95 43.77 66.18 72.57 42.4 46.62 45.21 46.24
19.57 22.32 103.64 86.77 115.58 123.59 59.0 68.53 67.16 74.35
25.57 29.16 64.36 57.49 72.93 77.2 56.59 53.78 52.44 41.58
66.89 67.63 968.14 661.72 938.57 1016.12 344.07 486.0 451.05 564.45
28.42 29.62 77.8 62.29 70.17 80.13 59.69 54.93 61.53 48.57
15.25 14.85 54.9 35.31 52.32 61.69 20.6 31.0 27.92 33.98
54.68 60.4 124.86 88.85 115.67 163.73 83.09 99.14 86.01 84.75
9.44 9.91 122.64 114.47 161.16 203.54 38.2 58.21 43.68 75.71
19.27 20.31 102.89 86.66 144.75 158.75 55.9 61.83 67.81 59.15
11.98 13.5 33.83 24.65 22.51 31.79 23.69 27.4 25.58 23.89
57.94 61.31 112.87 110.11 123.58 145.05 99.34 108.16 101.31 106.99
17.53 20.91 53.97 42.65 63.8 80.64 44.05 47.21 47.93 43.48
33.95 37.0 60.48 67.93 70.19 68.6 46.25 56.75 48.85 56.54
12.57 11.43 85.93 47.65 124.53 182.93 60.48 70.04 78.96 69.74
10.3 8.99 25.42 12.62 30.75 29.96 21.26 21.08 18.77 16.69
36.93 38.23 263.93 223.62 301.58 351.83 126.57 183.65 149.58 197.56
7.83 7.13 55.77 32.72 77.76 61.15 34.76 50.4 37.06 40.99
21.85 25.02 149.99 93.31 159.63 164.76 80.34 116.01 118.58 102.8
7.59 7.96 32.19 30.88 49.27 51.38 28.81 27.93 23.37 18.98
30.73 29.12 113.77 158.75 164.98 171.34 78.83 73.96 70.67 74.92
11.06 11.71 29.34 30.6 34.24 36.78 17.42 22.52 21.43 19.95
32.85 32.83 69.51 66.36 73.7 73.93 62.89 58.95 64.76 48.11
0.03 0.01 1.85 1.85 2.14 2.79 0.55 1.4 0.97 0.43
10.06 9.44 50.76 42.41 70.04 63.15 36.33 36.6 35.58 28.86
1.25 1.29 28.89 17.65 20.4 27.07 13.44 16.75 11.25 13.68
5.0 5.82 47.85 26.76 44.72 63.64 22.62 25.67 21.8 17.63
0.0 0.02 14.53 7.61 12.79 18.8 5.91 10.89 9.71 7.85
33.95 35.41 165.73 83.72 140.93 178.71 128.07 111.3 114.8 84.95
5.73 6.17 36.73 25.03 31.34 39.68 20.46 24.32 26.19 18.36
2.72 2.67 15.66 15.82 16.83 15.7 10.87 7.09 8.1 5.12
0.41 0.47 4.97 1.23 3.48 7.56 1.14 3.67 1.61 1.75
0.0 0.02 5.43 3.82 6.48 6.25 1.47 2.63 2.28 3.42
37.11 34.81 123.68 110.81 148.22 162.95 85.29 85.12 85.33 100.48
69.48 71.08 201.6 151.86 159.84 189.84 149.44 124.65 132.71 121.66
10.49 11.21 44.5 27.82 44.98 60.91 37.34 39.91 33.22 20.16
47.37 44.63 184.4 168.67 247.7 256.29 159.2 149.56 144.74 140.85
12.25 14.93 52.82 55.71 57.22 80.49 36.99 30.84 36.71 30.04
30.8 41.13 208.12 259.03 239.76 320.52 136.22 133.88 144.5 159.58
0.0 0.0 3.73 2.22 8.53 9.09 0.47 2.84 2.54 1.97
94.89 99.6 542.11 369.14 688.45 761.76 309.45 329.89 341.98 319.0
2.02 2.11 11.33 4.59 13.22 15.16 5.15 5.99 7.75 6.22
7.43 6.4 76.06 45.71 76.62 85.27 40.74 45.77 45.14 34.4
9.94 8.8 119.56 64.12 145.69 167.04 54.29 95.96 57.15 103.65
0.0 0.0 15.37 9.65 18.34 18.13 9.0 9.89 5.55 2.31
1.06 0.52 20.11 9.45 17.69 18.67 11.37 5.53 7.58 3.87
5.88 5.62 13.53 10.55 18.75 20.22 11.77 15.07 12.44 11.22
24.58 23.31 114.3 118.56 162.69 197.43 67.23 94.18 82.3 102.79
13.46 13.05 49.25 56.45 58.87 61.06 38.67 31.27 33.32 32.67
5.5 6.07 17.16 15.17 17.94 18.7 11.71 12.91 10.58 10.11
9.62 9.15 19.92 16.68 25.51 28.64 14.97 15.37 15.36 16.88

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)