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Heatmap: Cluster_262 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
1.31 1.5 -1.98 1.05 -2.47 -3.33 -1.7 -0.98 -1.28 -0.22
1.16 1.09 -1.03 0.39 -2.4 -2.82 -0.24 -0.05 -0.19 -0.29
0.81 0.98 -0.81 0.09 -0.36 -0.93 -0.72 -0.29 -0.18 0.03
1.11 1.34 -1.71 0.56 -1.55 -2.59 -0.65 -0.72 -0.52 0.13
0.85 1.09 0.1 0.47 -1.44 -1.59 -0.05 -0.43 -0.77 -0.66
1.15 1.34 -1.58 -0.01 -0.65 -1.75 0.53 -0.32 -1.18 -1.75
1.08 1.53 -2.6 0.74 -1.28 -1.6 -0.94 -0.97 -1.77 0.15
0.88 0.9 -0.27 0.43 -1.2 -1.55 -0.49 -0.12 -0.25 -0.22
1.13 1.13 -0.98 0.8 -2.67 -3.19 -0.69 -0.2 -0.32 -0.32
0.78 0.83 -0.88 0.41 -0.65 -1.26 -0.11 -0.1 -0.26 -0.16
1.04 1.29 -2.59 0.26 -1.07 -1.69 -0.34 -0.05 -0.04 -0.69
1.54 1.9 -2.18 0.63 -2.19 -2.91 - -1.71 -1.23 -0.94
1.22 1.24 -0.91 0.61 -3.46 -3.13 -0.1 -0.27 -0.3 -1.09
1.18 1.53 -1.91 0.62 -2.53 -3.36 -0.46 -0.25 -0.75 -0.7
1.32 1.13 -0.95 0.28 -2.59 -3.05 0.11 -0.58 -0.83 -0.04
0.99 0.78 -0.82 0.61 -1.52 -1.81 -0.04 -0.18 -0.24 -0.22
1.09 1.18 -0.62 -0.11 -1.26 -1.37 -0.71 -0.24 -0.33 -0.03
1.31 1.35 -1.08 0.17 -2.58 -2.84 -1.25 -0.57 -0.19 0.11
1.2 1.18 -0.42 0.04 -1.9 -1.97 -0.38 -0.15 -0.47 -0.41
0.76 1.32 -1.43 0.57 -2.6 -4.18 -0.1 -0.19 0.02 -0.16
1.18 1.55 -2.28 0.35 -2.27 -2.58 -0.56 -0.54 -0.4 -0.27
1.02 1.19 -1.67 0.52 -1.47 -1.64 0.05 -0.38 -0.21 -0.77
1.35 1.31 -0.92 0.19 -5.56 -6.35 -0.96 -0.97 -0.29 0.51
0.95 1.12 -1.57 0.27 -1.11 -1.22 0.35 -0.18 -0.51 -0.76
1.38 1.64 -3.34 0.11 -3.43 -3.71 -0.63 -0.67 -0.88 0.17
1.35 1.56 -1.57 0.84 -5.49 -4.54 -1.14 -0.7 -0.51 -0.94
0.83 1.19 -1.72 0.8 -1.68 -2.76 -0.42 -0.16 -0.41 0.06
1.55 1.57 -3.35 1.09 -1.93 -2.72 -2.66 -2.03 -1.1 -0.73
0.92 1.05 -1.69 0.72 -1.22 -1.56 0.07 -0.18 -0.57 -0.5
0.92 0.98 -0.63 0.42 -1.67 -1.86 -0.47 0.01 0.06 -0.33
1.43 2.18 - 0.44 -1.86 - - - -2.0 -0.18
1.2 1.14 -0.22 0.25 -2.32 -3.15 -0.39 -0.36 -0.5 -0.16
1.06 1.83 -4.05 0.65 -0.82 -2.34 -1.38 -1.83 -1.2 -0.2
1.35 1.34 -1.34 0.72 -2.59 -2.75 -0.42 -0.74 -0.59 -0.86
0.68 0.78 -0.81 0.11 -0.63 -0.65 0.18 -0.18 -0.09 -0.31
1.23 1.64 -1.54 0.64 -1.65 -2.72 -0.72 -0.88 -1.01 -0.96
0.53 0.66 -0.17 0.25 -0.47 -0.71 -0.21 -0.21 -0.03 -0.21
1.15 1.35 -1.2 0.52 -1.36 -2.05 -0.16 -0.79 -0.56 -0.78
0.58 0.55 -0.35 0.32 -0.55 -0.75 0.01 -0.21 -0.0 -0.22
0.9 1.07 -0.68 0.76 -1.41 -1.92 -0.14 -0.53 -0.28 -0.6
1.05 1.3 -1.38 0.67 -2.31 -2.7 0.01 -0.36 -0.42 -0.72
0.74 1.09 -1.21 0.97 -3.24 -3.09 0.24 -0.74 -0.03 -0.29
0.94 1.02 -0.77 0.3 -1.73 -1.61 -0.15 0.02 -0.08 -0.43
0.9 0.8 -0.3 0.11 -0.85 -1.3 -0.25 -0.35 -0.19 0.07
1.23 1.39 -0.96 0.19 -2.45 -3.0 -0.85 -0.4 -0.48 0.05
1.08 1.25 -0.93 0.22 -3.54 -3.67 -0.58 -0.14 -0.14 0.23
1.51 1.54 -2.09 0.98 -2.91 -3.29 -1.14 -0.93 -1.25 -1.27
0.85 0.83 -0.97 0.27 -0.8 -0.66 0.1 -0.44 -0.16 -0.36
1.22 1.31 -1.82 0.67 -1.31 -1.4 -0.73 -1.04 -0.96 -0.1
0.8 1.05 -0.79 0.41 -1.1 -1.78 -0.31 -0.21 -0.29 0.06
1.26 1.19 -0.45 0.32 -2.1 -2.31 -0.27 -0.45 -0.69 -0.47
1.18 1.41 -1.8 0.7 -2.99 -3.99 -0.48 -0.4 -0.48 -0.33
0.94 0.92 -0.26 0.11 -1.02 -1.35 -0.36 -0.13 -0.13 -0.36
1.06 1.16 -1.06 0.94 -2.46 -2.55 -0.12 -0.65 -0.4 -0.72
0.85 0.93 -0.3 0.14 -1.23 -1.46 -0.23 -0.13 -0.04 -0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.