Heatmap: Cluster_172 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	sid-dev (Zhang et al., 2022)	wt-dev (Zhang et al., 2022)	untreated (Thomas et al., 2018)	treated - synthetic auxin (Thomas et al., 2018)	untreated (Wang et al., 2019)	mowed (Wang et al., 2019)	time point 1 (Ogden et al., 2020)	time point 2 (Ogden et al., 2020)	time point 3 (Ogden et al., 2020)	time point 4 (Ogden et al., 2020)
Bradi1g01760.1	-	-	-0.86	1.46	-0.89	-0.22	0.88	0.36	0.15	0.09
Bradi1g04337.2	-3.4	-3.47	0.02	-0.39	-0.29	-0.31	-0.02	0.93	0.32	1.19
Bradi1g05205.1	-1.07	-1.0	-0.46	0.96	-0.66	-0.67	-0.23	0.3	0.37	0.78
Bradi1g09150.1	-0.6	-0.46	-0.73	-0.5	-0.11	-0.12	-0.08	0.51	0.38	0.84
Bradi1g09230.1	-3.0	-1.84	-1.1	0.85	0.6	0.32	0.09	0.48	0.29	-0.18
Bradi1g09420.1	-3.02	-3.08	-0.52	0.64	0.1	0.22	-0.25	0.21	0.8	0.61
Bradi1g09830.1	-	-	-	-	1.0	0.83	-	0.8	1.4	0.89
Bradi1g10282.1	-3.02	-1.6	-1.62	1.01	-2.57	-0.95	0.91	0.06	1.11	0.54
Bradi1g10865.1	-	-	-1.56	0.9	-0.38	0.13	0.44	0.93	0.64	0.13
Bradi1g11050.1	-0.45	-0.94	-0.14	-0.05	-0.31	-1.16	-0.39	0.27	0.76	0.97
Bradi1g11805.1	-2.07	-1.75	-4.75	0.84	-1.03	-1.92	0.6	1.03	0.91	0.53
Bradi1g13080.1	-1.68	-1.65	0.09	0.47	0.43	0.32	-0.04	0.33	0.28	-0.17
Bradi1g17780.1	-4.09	-4.52	-1.38	-1.8	-2.64	-2.36	0.48	1.46	0.43	1.75
Bradi1g23450.1	-9.95	-11.12	-0.8	1.38	-0.38	-0.52	0.31	0.5	-0.22	0.87
Bradi1g25810.1	-3.05	-2.16	-0.38	0.57	0.26	0.21	0.49	0.55	0.23	0.03
Bradi1g26260.1	-3.82	-4.07	-1.9	0.28	0.44	0.47	-0.34	0.75	0.82	0.49
Bradi1g26766.1	-4.13	-4.58	-0.53	0.35	0.0	0.15	-0.22	0.48	0.6	1.03
Bradi1g30750.1	-0.89	-0.59	-0.2	-0.17	-0.4	-0.05	0.05	0.54	0.04	0.85
Bradi1g30830.1	-2.2	-2.26	-0.85	1.29	-0.61	-0.54	-0.03	0.41	-0.22	1.04
Bradi1g31610.1	-	-	-0.05	1.51	0.72	0.79	-0.48	-0.02	-0.53	-1.28
Bradi1g33740.1	-2.13	-1.55	-1.21	0.52	0.31	-0.18	-0.18	0.05	0.69	0.93
Bradi1g35030.1	-3.37	-3.87	-0.2	-0.24	-0.41	0.35	0.47	0.91	0.4	0.59
Bradi1g36800.1	-6.64	-5.23	-0.41	1.29	-0.72	-1.16	-0.98	0.52	0.5	1.23
Bradi1g47226.2	-	-	-1.25	1.47	-1.09	-1.12	-0.25	0.93	0.51	0.77
Bradi1g47270.2	-1.51	-1.12	0.24	-0.16	-0.05	0.44	0.23	0.42	0.06	0.31
Bradi1g47450.1	-3.44	-4.35	-2.29	0.17	-0.28	0.21	-0.17	1.26	0.73	0.69
Bradi1g49780.1	-3.06	-3.51	0.25	0.34	-0.2	-0.09	0.15	0.7	0.27	0.66
Bradi1g53300.1	-1.28	-0.92	-0.51	0.62	0.1	0.16	0.41	0.13	0.08	0.2
Bradi1g54800.7	-1.32	-0.91	-0.37	0.92	-0.2	-0.69	-0.15	0.51	0.18	0.54
Bradi1g55720.1	-3.49	-3.61	-2.46	0.27	0.94	0.29	-0.31	0.38	0.53	0.8
Bradi1g56240.1	-3.78	-4.42	-0.18	0.77	-0.03	-0.23	0.58	0.64	0.47	0.03
Bradi1g56807.1	-1.61	-2.09	-1.53	1.06	-0.1	-0.19	-0.03	1.03	0.02	0.23
Bradi1g61290.1	-2.33	-1.89	-0.82	1.33	-1.28	-1.33	0.65	0.37	0.26	0.67
Bradi1g62080.2	-	-	-1.01	1.68	-2.27	-0.72	-0.11	0.57	0.29	0.88
Bradi1g63067.1	-7.6	-	-0.05	0.5	-0.01	0.68	0.31	0.96	-0.11	-0.13
Bradi1g63960.2	-0.65	-0.8	0.2	-0.0	0.07	0.17	0.14	0.31	0.26	-0.11
Bradi1g64454.1	-0.81	-0.65	-0.32	-0.02	-0.22	-0.21	0.47	0.52	0.18	0.41
Bradi1g65230.2	-3.4	-3.56	-2.82	0.31	-2.29	-3.27	0.92	1.17	0.22	1.49
Bradi1g66430.1	-0.22	-0.26	-0.09	0.1	-0.09	0.12	-0.23	0.04	0.2	0.31
Bradi1g68085.1	-	-	-1.22	0.96	0.6	-0.01	-0.96	-0.03	1.0	0.7
Bradi1g69020.6	-3.19	-4.36	0.47	0.55	-2.18	-0.98	1.47	0.39	-0.07	0.29
Bradi1g71210.1	-2.56	-2.67	-0.42	0.27	-0.38	-0.94	0.21	1.14	-0.11	1.09
Bradi1g72449.1	-2.89	-2.97	-1.49	0.8	-0.12	0.22	-0.69	0.58	0.58	0.96
Bradi1g75877.1	-0.74	-0.23	-0.4	0.36	-0.2	-0.08	0.03	0.3	0.51	0.01
Bradi1g76350.1	-6.48	-7.64	-0.28	1.38	-0.49	-0.05	0.24	0.9	-0.16	-0.1
Bradi2g00381.1	-	-13.47	-1.0	0.37	-0.07	-2.08	-0.26	0.85	1.08	1.19
Bradi2g02041.1	-1.25	-1.05	-1.5	1.28	0.22	-0.4	0.57	0.43	-0.19	-0.56
Bradi2g05420.1	-0.57	-0.55	-0.03	-0.12	0.09	0.11	0.21	0.3	0.22	0.07
Bradi2g06880.3	-	-	-0.44	1.17	-0.47	-0.44	-0.02	0.97	0.42	0.36
Bradi2g08140.1	-1.9	-1.8	0.18	0.05	-0.44	0.12	0.42	0.55	0.43	0.37
Bradi2g08450.3	-2.72	-1.3	-0.89	0.74	-2.26	-4.23	0.04	0.84	0.26	1.56
Bradi2g09407.2	-1.54	-1.42	0.03	0.45	-0.3	-0.29	0.11	0.5	0.68	0.23
Bradi2g09960.1	-5.05	-5.22	-0.1	1.66	-5.35	-3.73	-0.12	0.94	-0.39	1.11
Bradi2g10000.1	-1.4	-1.51	-0.4	1.05	-0.12	-0.57	0.24	0.69	0.16	-0.1
Bradi2g10150.3	-1.45	-1.28	-0.92	0.72	-0.12	-0.98	0.01	0.55	0.66	0.64
Bradi2g11013.1	-2.56	-2.36	0.15	0.06	0.03	0.51	0.26	0.54	0.43	0.06
Bradi2g11940.1	-9.01	-7.13	-1.39	1.58	-0.07	0.67	-0.04	0.42	-0.11	-0.26
Bradi2g12610.1	-0.93	-1.13	-0.73	-0.07	0.09	0.05	0.71	0.43	0.15	0.34
Bradi2g15471.1	-2.17	-2.23	-1.46	1.33	-0.46	-2.07	-0.89	0.39	0.68	1.17
Bradi2g15570.1	-6.11	-5.39	-2.33	0.98	0.63	0.18	-0.75	0.31	0.5	0.9
Bradi2g22269.1	-1.1	-	-0.8	-1.35	0.53	0.13	-0.75	1.33	0.54	0.55
Bradi2g24140.1	-8.2	-6.77	-3.44	0.14	0.41	0.56	-0.65	0.41	0.95	1.06
Bradi2g24400.1	-1.03	-1.38	-0.23	0.51	-0.15	-0.02	0.24	0.6	0.49	-0.21
Bradi2g33100.1	-3.78	-3.39	-1.22	0.73	0.27	-0.03	0.64	0.65	0.24	0.32
Bradi2g34290.1	-3.58	-3.75	-1.01	1.72	-1.56	-1.94	-0.01	0.19	0.8	0.66
Bradi2g35671.1	-	-	-1.02	1.74	-0.03	-	0.83	-0.02	0.8	-0.54
Bradi2g37902.1	-2.12	-1.51	-1.43	0.14	-0.04	0.63	-0.26	0.27	1.06	0.37
Bradi2g38765.1	-3.58	-3.24	-1.66	-0.16	-0.2	-0.69	-0.1	0.9	0.91	1.28
Bradi2g42480.2	-4.95	-4.21	-0.78	1.47	-0.1	-1.14	0.64	0.1	0.19	0.48
Bradi2g43040.1	-4.85	-4.02	-1.47	-2.88	-2.37	-2.59	0.25	1.64	-0.53	2.01
Bradi2g44891.1	-1.7	-2.14	-0.23	0.21	-0.18	0.08	0.08	0.66	0.04	0.88
Bradi2g45500.1	-2.54	-2.5	0.73	0.7	-0.09	0.24	0.46	0.12	-0.34	-0.0
Bradi2g48907.1	-9.98	-10.14	-0.16	0.34	0.59	0.3	-0.05	0.64	0.29	0.44
Bradi2g51040.8	-1.05	-0.62	-0.76	1.04	-0.92	-1.19	-0.95	-1.35	-0.17	1.79
Bradi2g51716.1	-2.08	-2.23	0.12	0.28	-0.55	-0.35	-0.21	0.76	0.55	0.81
Bradi2g52375.1	-	-2.43	-	2.2	-1.69	0.7	-	-0.77	-	1.43
Bradi2g53880.2	-4.95	-6.7	-1.34	-0.51	0.15	-0.6	-0.19	0.94	1.12	1.09
Bradi2g54750.1	-2.85	-2.84	-4.04	1.88	-1.2	-1.18	-0.24	-0.41	0.54	1.04
Bradi2g55100.1	-0.87	-0.77	-0.21	0.07	-0.06	-0.06	0.24	0.23	0.2	0.62
Bradi2g56360.2	-3.73	-4.32	-0.42	0.19	-0.0	-1.46	0.1	1.0	0.75	0.9
Bradi2g56786.1	-4.23	-4.71	0.07	0.31	0.4	0.16	0.16	0.45	0.32	0.54
Bradi2g58460.9	-1.24	-1.22	-1.21	0.17	-0.1	0.43	0.28	0.68	0.45	0.16
Bradi2g59750.1	-	-	-0.73	0.05	0.34	0.55	0.53	0.64	0.56	0.19
Bradi3g06472.1	-1.62	-1.03	-2.65	0.78	0.45	-0.31	-0.14	0.47	0.5	0.51
Bradi3g07558.1	-5.76	-6.21	0.39	0.39	0.26	0.25	0.31	0.81	0.19	-0.29
Bradi3g07770.1	-	-	-0.92	0.85	-0.96	-0.56	0.73	1.0	0.48	0.52
Bradi3g09620.1	-	-	-0.24	0.2	0.15	0.14	0.43	0.76	0.46	0.45
Bradi3g10887.3	-1.72	-1.46	-2.17	1.63	-2.33	-1.25	0.1	0.54	0.42	0.62
Bradi3g16360.2	-0.41	-0.3	-0.06	0.46	-0.12	-0.26	-0.08	0.18	0.01	0.34
Bradi3g16590.1	-	-2.43	-2.79	-1.62	-0.78	-0.59	0.4	0.69	0.22	2.0
Bradi3g21284.1	-1.88	-1.69	-1.86	1.09	-0.2	0.06	0.05	0.32	0.59	0.41
Bradi3g22297.1	-0.98	-1.0	0.1	0.8	-0.08	0.22	-0.0	0.1	0.16	-0.17
Bradi3g22887.1	-0.76	-0.3	-0.63	0.61	-0.17	-0.49	-0.55	0.52	0.06	0.72
Bradi3g23220.2	-	-5.67	-0.3	1.66	-1.17	-1.21	-3.16	0.41	0.0	1.42
Bradi3g27610.3	-3.43	-3.38	0.15	0.19	0.44	0.26	0.08	0.44	0.11	0.6
Bradi3g30220.1	-0.03	-0.88	-0.05	0.06	-0.74	-0.76	0.02	0.73	-0.32	0.86
Bradi3g31890.1	-1.16	-0.69	-0.55	0.76	0.12	-0.23	-0.3	0.41	0.35	0.26
Bradi3g32670.1	-2.28	-1.75	-0.54	0.7	0.03	0.38	0.34	0.46	0.2	0.11
Bradi3g35600.1	-1.71	-1.83	-1.75	0.24	0.06	-1.63	-0.32	1.06	0.96	0.79
Bradi3g36290.1	-	-	-2.05	1.99	-1.39	-1.03	-0.48	0.41	-	1.51
Bradi3g36950.1	-0.52	-0.24	-0.58	0.07	0.12	-0.42	0.11	0.3	0.4	0.34
Bradi3g37570.2	-1.9	-1.87	0.16	-0.28	-0.05	0.26	0.53	0.69	0.28	0.11
Bradi3g38540.1	-6.94	-7.75	-0.28	1.42	-2.97	-3.15	0.01	0.45	0.18	1.45
Bradi3g40259.1	-2.38	-4.55	-0.11	-0.29	-1.9	0.29	0.14	1.07	0.89	0.55
Bradi3g42000.1	-2.31	-2.0	-0.82	0.69	-0.55	-0.47	-0.2	0.8	0.78	0.71
Bradi3g45380.1	-4.02	-4.95	-0.9	1.46	-0.15	-0.62	-0.28	0.35	0.29	0.8
Bradi3g47710.1	-7.54	-	0.06	0.64	-0.75	-2.03	0.22	1.19	0.32	0.89
Bradi3g47720.1	-8.94	-8.94	-0.97	1.27	-0.81	-2.34	-0.01	1.19	0.4	0.78
Bradi3g49320.1	-0.73	-0.63	-1.38	1.24	-0.61	-0.19	-0.24	0.35	0.24	0.24
Bradi3g50680.1	-4.53	-4.7	-0.38	-0.21	-0.47	-2.45	0.14	1.55	-0.31	1.35
Bradi3g51120.2	-1.48	-1.66	-0.21	-0.11	0.03	0.32	-0.08	0.65	0.05	0.78
Bradi3g52510.3	-3.08	-4.63	0.36	-0.09	0.32	0.47	-0.48	0.76	0.67	-0.02
Bradi3g55680.1	-3.7	-4.3	-0.98	1.59	-2.54	-3.33	0.26	0.85	0.41	0.82
Bradi4g00865.1	-4.39	-3.56	-0.37	0.73	-0.92	-2.73	0.86	1.28	0.01	0.59
Bradi4g02850.1	-8.41	-7.58	0.72	0.99	-0.44	-0.36	-0.96	0.44	0.43	0.7
Bradi4g02860.1	-4.6	-4.77	-0.34	0.28	0.08	0.19	-0.67	0.74	0.72	0.82
Bradi4g08220.1	-2.1	-1.66	-0.03	0.85	0.17	0.23	0.38	0.27	-0.27	0.05
Bradi4g13960.1	-2.68	-2.79	-0.25	0.35	0.27	0.09	-0.36	0.51	0.29	0.92
Bradi4g16370.1	-2.29	-1.38	-0.11	1.15	-0.2	-0.64	-0.36	0.59	0.46	0.13
Bradi4g18980.1	-2.33	-2.81	-3.87	-0.66	-	-3.45	0.88	1.36	0.58	1.57
Bradi4g28900.1	-5.07	-4.24	-1.0	0.7	0.08	0.38	-0.33	0.75	0.54	0.58
Bradi4g31690.1	-0.38	-0.14	-1.66	1.64	-1.93	-2.04	-1.34	-0.17	0.41	0.82
Bradi4g32027.1	-6.58	-7.33	0.21	0.41	0.62	-0.1	0.33	0.68	0.25	-0.03
Bradi4g32810.4	-0.61	-0.46	0.09	0.6	-0.87	-0.42	-0.65	0.28	0.66	0.39
Bradi4g36517.2	-2.9	-1.93	-1.26	1.81	-1.84	-2.0	-0.79	0.43	0.36	0.95
Bradi4g38290.3	-2.71	-2.83	0.34	0.47	0.16	0.31	0.05	0.66	0.27	-0.17
Bradi4g38860.1	-2.45	-2.62	-0.37	1.11	0.49	0.27	-0.79	0.08	0.27	0.34
Bradi4g41520.5	-0.83	-0.79	-0.4	0.54	0.25	0.14	0.04	0.16	0.19	0.1
Bradi4g42500.1	-3.35	-1.52	-0.79	0.37	-1.32	-1.12	-0.2	1.39	0.55	0.9
Bradi5g03190.1	-	-	-2.48	1.48	-3.99	-3.05	-3.08	0.2	0.39	2.1
Bradi5g03783.1	-	-	-1.54	1.45	-2.76	-2.46	-2.31	-0.45	0.24	2.16
Bradi5g07840.1	-1.23	-1.26	0.2	1.09	-0.89	-0.69	-0.08	0.55	0.11	0.3
Bradi5g08940.1	-	-	-0.96	0.8	-0.97	-1.36	-	1.62	-0.14	1.52
Bradi5g09720.1	-7.36	-	-2.41	1.72	-1.57	-1.11	0.2	0.59	0.86	0.32
Bradi5g10920.1	-6.14	-6.63	-0.16	0.55	-0.42	0.29	0.39	0.39	0.86	0.27
Bradi5g11320.1	-1.8	-1.75	-0.58	0.78	0.06	-0.03	0.36	0.52	0.17	0.23
Bradi5g13320.1	-2.03	-1.93	-0.52	1.05	0.09	-0.41	0.36	0.62	0.15	-0.04
Bradi5g16940.1	-3.82	-6.15	-0.75	0.78	-0.54	0.06	0.2	0.63	0.66	0.68
Bradi5g18010.1	-5.01	-3.86	-0.17	0.59	0.7	0.45	-0.28	0.27	0.19	0.43
Bradi5g18040.1	-8.89	-6.73	0.2	1.56	-0.43	-0.45	-0.52	0.62	0.01	0.24
Bradi5g19220.3	-	-	-0.43	-0.02	-1.29	-0.2	-1.32	1.1	0.73	1.48
Bradi5g20950.2	-1.03	-1.19	0.12	0.38	-0.16	0.24	0.41	0.08	0.01	0.29
Bradi5g22260.1	-1.26	-0.89	-0.0	0.7	0.14	0.31	-0.04	0.51	-0.29	-0.21
Bradi5g27360.1	-0.68	-0.64	-0.72	0.62	-0.12	-0.01	0.15	0.48	0.14	0.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.