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Heatmap: Cluster_190 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
sid-dev (Zhang et al., 2022)
wt-dev (Zhang et al., 2022)
untreated (Thomas et al., 2018)
treated - synthetic auxin (Thomas et al., 2018)
untreated (Wang et al., 2019)
mowed (Wang et al., 2019)
time point 1 (Ogden et al., 2020)
time point 2 (Ogden et al., 2020)
time point 3 (Ogden et al., 2020)
time point 4 (Ogden et al., 2020)
-1.27 -1.12 1.58 1.48 -3.64 -2.66 -0.85 -0.58 -0.55 0.28
-0.95 -1.09 1.07 1.14 -0.86 -1.92 0.23 -0.22 -0.06 -0.15
-0.67 -0.69 1.15 1.11 -1.22 -1.35 -0.47 -0.28 -0.16 0.16
-0.75 -0.77 0.86 0.85 -0.63 -0.65 -0.31 -0.03 0.02 0.16
-0.19 -0.18 0.53 0.9 -0.98 -1.45 -0.07 -0.15 0.1 0.18
-1.08 -0.82 1.34 1.22 -1.35 -1.8 -0.43 -0.5 -0.19 0.15
-0.92 -0.79 1.05 1.03 -1.36 -1.23 0.1 -0.16 -0.11 0.08
-0.23 -0.31 0.63 0.41 -0.66 -0.56 0.13 0.15 0.08 -0.17
-0.34 -0.24 0.65 0.46 -0.96 -1.2 0.27 0.11 0.06 0.19
-0.77 -1.61 1.83 1.35 -2.54 -2.67 -2.0 -0.15 -0.08 -0.85
-1.08 -0.91 0.91 0.89 -0.53 -0.39 -0.05 -0.01 0.04 -0.28
-0.52 -0.72 0.85 0.76 -1.56 -1.81 0.34 0.13 0.15 0.14
-0.92 -0.88 1.04 0.85 -0.64 -0.97 0.02 -0.02 -0.01 -0.11
-0.71 -0.71 0.54 1.0 -0.81 -0.91 0.21 -0.02 -0.02 0.12
-2.81 -2.02 1.7 1.58 -3.01 -2.74 -0.66 -0.26 -0.79 0.09
-1.64 -1.71 0.97 1.42 -1.57 -1.8 0.11 -0.17 -0.1 0.28
-5.82 -5.3 1.53 1.11 -0.96 -0.32 0.25 0.02 -0.26 -0.84
-0.62 -0.51 0.61 0.81 -0.47 -0.64 -0.35 0.02 0.07 0.21
-0.11 -0.17 0.39 0.45 -0.28 -0.54 -0.34 -0.03 0.09 0.22
-0.2 -0.15 0.6 0.67 -0.71 -0.97 0.17 -0.05 0.05 -0.18
-0.64 -0.36 0.58 0.98 -1.14 -1.44 0.15 -0.12 0.24 0.11
-0.38 -0.34 0.41 0.7 -0.35 -0.44 -0.04 -0.03 -0.16 0.16
-1.55 -1.61 1.12 0.73 -0.32 -0.26 -0.24 0.01 0.01 0.0
-0.7 -0.62 0.89 0.75 -0.76 -0.8 -0.05 0.03 0.0 0.05
-0.83 -0.82 0.93 0.94 -0.73 -0.49 -0.12 -0.17 0.05 -0.18
-0.04 -0.01 0.16 0.38 -0.35 -0.69 -0.08 0.0 0.12 0.24
-0.21 -0.3 0.53 0.32 -0.3 -0.49 0.03 0.06 -0.03 0.07
-0.29 -0.14 0.61 0.77 -0.99 -1.14 0.2 -0.09 0.02 -0.02
-0.57 -0.47 0.71 1.03 -0.77 -0.8 -0.01 -0.24 -0.11 -0.01
-1.77 -1.57 1.2 0.93 -0.99 -0.55 0.08 -0.7 0.2 0.21
-0.4 -0.29 0.45 0.34 0.05 -0.13 -0.03 -0.18 -0.02 0.01
-0.24 -0.16 0.35 0.75 -0.84 -1.07 0.04 0.02 0.1 0.21
-0.57 -0.64 0.65 0.77 -0.55 -0.66 0.01 -0.07 -0.01 0.19
-0.09 -0.02 0.28 0.27 -0.55 -0.61 0.06 0.16 -0.01 0.22
-0.25 -0.11 0.51 0.86 -0.58 -0.49 -0.03 -0.25 -0.16 -0.15
-0.47 -0.31 0.49 0.92 -1.04 -1.18 0.15 -0.13 0.1 0.2
-0.75 -0.54 0.96 0.98 -0.87 -0.9 -0.2 -0.1 -0.46 0.25
-0.38 -0.26 0.29 0.5 -0.41 -0.54 0.08 0.24 0.16 -0.04
-0.42 -0.28 0.3 0.46 -0.6 -0.78 0.22 0.18 0.26 0.12
-1.54 -1.4 1.12 1.19 -0.45 -1.79 -0.27 -0.3 -0.62 0.59
-0.34 -0.45 0.45 0.5 -0.27 -0.31 0.04 -0.04 -0.03 0.11
-0.89 -0.96 0.98 1.19 -0.79 -0.97 -0.14 -0.24 -0.11 -0.14
-0.4 -0.43 0.85 0.97 -1.09 -1.39 0.08 -0.15 0.08 -0.19
-0.42 -0.47 0.55 0.57 -0.3 -0.44 -0.11 -0.0 -0.1 0.23
-0.46 -0.56 0.64 0.4 -0.07 -0.22 -0.34 -0.04 -0.02 0.21
-0.03 -0.17 0.65 0.6 -0.99 -1.42 -0.19 -0.01 0.26 0.14
-1.79 -1.5 1.39 0.66 -1.03 -0.63 -0.21 0.02 -0.09 0.28
0.02 -0.03 0.59 0.39 -1.07 -1.47 0.14 0.01 0.09 0.23
-2.11 -1.78 1.47 1.44 -3.15 -2.64 -0.22 -0.64 -0.11 0.38
-0.25 -0.32 0.82 0.93 -0.99 -0.82 -0.08 -0.24 -0.2 -0.06
-0.72 -0.73 1.06 0.54 -1.26 -1.55 0.13 0.15 -0.15 0.47
-0.78 -0.57 0.95 1.07 -1.42 -1.62 0.01 -0.14 0.02 0.12
-1.34 -1.28 0.89 1.29 -0.8 -1.14 -0.15 -0.08 -0.16 0.16
-1.42 -1.18 1.3 1.24 -1.39 -1.38 0.37 -0.42 -0.22 -0.56
-0.83 -0.73 0.95 0.63 -0.97 -0.65 -0.17 0.02 -0.34 0.6
-0.72 -0.5 0.84 1.04 -0.98 -1.19 -0.04 -0.06 0.01 -0.07
-0.14 -0.06 0.65 0.73 -0.98 -1.23 0.11 -0.19 -0.01 0.03
-1.6 -1.4 0.99 0.7 -0.77 -0.17 0.17 0.14 0.23 -0.32
-0.53 -0.25 0.76 0.74 -0.58 -0.93 -0.08 -0.1 0.17 -0.13
-0.52 -0.73 0.76 1.04 -0.76 -0.98 -0.07 -0.05 -0.16 0.04
-0.29 -0.3 0.49 0.55 -0.25 -0.76 0.01 -0.13 0.04 0.15
-0.18 -0.27 0.39 1.0 -1.78 -2.13 0.26 -0.01 0.07 0.29
-0.67 -0.43 0.86 0.81 -0.87 -0.86 0.0 -0.05 -0.06 0.04
-0.77 -0.65 1.09 0.55 -1.33 -1.4 0.05 0.3 0.24 -0.05
-1.16 -1.01 1.31 0.79 -1.95 -1.68 0.01 0.23 0.15 -0.03
-0.82 -0.61 1.52 1.02 -2.37 -1.3 0.22 -0.7 -0.7 -0.17
- -4.31 1.63 1.89 - - 0.09 -0.07 -1.25 -0.46
-2.01 -1.15 1.49 1.06 -2.55 -2.22 0.09 -0.14 0.04 0.02
-3.79 -3.62 1.52 1.73 -3.69 -3.92 -0.08 -0.55 -0.33 0.12
-1.53 -1.52 1.12 0.83 -0.39 -0.64 -0.37 0.06 0.17 0.01
-0.12 -0.04 0.47 0.25 -0.33 -0.47 -0.1 0.04 0.11 -0.04
-1.2 -0.95 1.29 1.18 -1.32 -1.78 -0.2 -0.3 -0.2 0.12
-1.63 -1.06 1.09 1.62 -3.16 -2.54 0.19 -0.05 0.04 -0.8
-0.48 -0.18 1.32 0.76 -2.39 -1.52 -0.05 0.07 -0.27 -0.28
-1.04 -0.69 1.04 0.79 -1.23 -1.05 -0.76 0.37 0.26 0.16
-0.5 -0.41 0.61 0.72 -0.5 -0.42 -0.04 -0.16 -0.04 0.09
-1.04 -1.04 1.28 1.13 -2.46 -1.03 0.04 -0.44 0.02 -0.06
0.04 -0.25 0.58 0.57 -0.75 -0.98 -0.04 -0.05 0.07 0.07
-0.86 -0.91 0.62 1.42 -0.66 -0.86 -0.34 -0.27 -0.33 0.13
-0.41 -0.37 0.72 0.86 -1.24 -1.45 0.02 -0.0 -0.02 0.3
-1.01 -0.86 1.35 1.29 -1.57 -1.67 -0.38 -0.48 -0.31 0.03
-0.31 -0.32 0.59 0.6 -0.69 -1.42 0.07 0.24 0.17 0.04
-0.82 -0.59 0.79 0.58 -1.04 -0.95 0.49 -0.1 0.36 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.