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Heatmap: Cluster_637 (Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
top second leaf of the OE-3 line (Chen et al., 2021)
SE21s - zt36 (Li et al., 2021)
young leaves - two-week old seedlings (Zhao et al., 2020)
japonica panicle transcriptomic (Pang et al., 2021)
accession WRC19 (Kawakatsu et al., 2021)
accession WRC20 (Kawakatsu et al., 2021)
accession WRC21 (Kawakatsu et al., 2021)
accession WRC39 (Kawakatsu et al., 2021)
accession WRC40 (Kawakatsu et al., 2021)
accession WRC41 (Kawakatsu et al., 2021)
accession WRC42 (Kawakatsu et al., 2021)
accession WRC43 (Kawakatsu et al., 2021)
osmads58-/- (Shen et al., 2022)
elf3 ZT6 Long day (Andrade et al., 2022)
Zax1_+P_Sh_24hr (Wang et al., 2021)
Zax2_+P_Sh_24hr (Wang et al., 2021)
wild type - cold shock (Berchembrock et al., 2022)
cold stress - 2h (Nie et al., 2022)
cold stress - 168h (Nie et al., 2022)
heat shock for 0.5h (Wu et al., 2022)
dry season, timepoint 6 (Wilkins et al., 2016)
dry season, timepoint 12 (Wilkins et al., 2016)
dry season, timepoint 14 (Wilkins et al., 2016)
control - 30 min (Wilkins et al., 2016)
control - 45 min (Wilkins et al., 2016)
control - 60 min (Wilkins et al., 2016)
heat - 60 min (Wilkins et al., 2016)
heat - 75 min (Wilkins et al., 2016)
heat - 90 min (Wilkins et al., 2016)
recov heat - 225 min (Wilkins et al., 2016)
drought - 30 min (Wilkins et al., 2016)
recov heat - 165 min (Wilkins et al., 2016)
recov heat - 240 min (Wilkins et al., 2016)
control - 135 min (Wilkins et al., 2016)
heat - 120 min (Wilkins et al., 2016)
heat - 225 min (Wilkins et al., 2016)
Mulai variety - S-type lateral roots (Cartagena et al., 2021)
osddm1a/1b (Tan et al., 2016)
Cr-DJ-2 (Tan et al., 2016)
control - 2 weeks old (Yuan et al., 2018)
cold - 2 weeks old (Yuan et al., 2018)
rdv-infected (Zhao et al., 2017)
wild-type (Zhao et al., 2017)
OsSAMS1 overexpression transgene (Zhao et al., 2017)
Gibberellic acid (Xiang et al., 2017)
four days in submergence with paclobutrazol (Xiang et al., 2017)
variety HY (wild-type) (Cheng et al., 2018)
jizi (Qi et al., 2018)
ago18 - four weeks old (Swetha et al., 2022)
waterlogging (Chakraborty et al., 2021)
wild-type (Chou et al., 2019)
Segment 01 (Wang et al., 2014)
Segment 02 (Wang et al., 2014)
Segment 03 (Wang et al., 2014)
Segment 04 (Wang et al., 2014)
Segment 05 (Wang et al., 2014)
Segment 06 (Wang et al., 2014)
Segment 07 (Wang et al., 2014)
Segment 08 (Wang et al., 2014)
Segment 09 (Wang et al., 2014)
Segment 10 (Wang et al., 2014)
Segment 11 (Wang et al., 2014)
2.88 5.18 9.21 9.22 8.68 7.98 8.59 2.73 3.73 2.71 3.9 4.77 15.09 5.42 4.26 4.82 4.91 1.43 1.47 4.97 3.18 5.58 5.2 2.66 2.71 3.72 3.15 3.35 4.25 4.03 4.8 3.82 2.89 3.22 1.63 2.88 3.92 6.48 6.5 0.38 4.06 9.22 5.86 3.9 3.01 7.53 7.8 8.25 3.21 9.68 2.46 1.57 0.39 0.47 0.28 0.0 1.27 0.73 0.42 1.39 2.14 0.27
0.43 0.84 1.04 3.19 1.8 2.49 2.9 0.23 0.38 0.6 0.38 0.18 4.18 1.16 0.0 0.53 0.4 0.06 0.0 1.43 0.0 0.23 0.45 0.0 0.22 0.2 0.36 0.43 0.58 0.49 0.11 0.45 0.69 0.2 0.21 0.29 1.08 1.42 1.02 0.0 0.53 1.92 0.3 0.57 1.25 1.46 2.61 2.24 0.12 1.82 0.0 0.47 0.0 0.0 0.12 0.0 0.37 0.0 0.0 0.78 0.43 0.06

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)