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Heatmap: Cluster_7 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
cold stress 168h (Nie et al., 2022)
cold stress 24h (Nie et al., 2022)
cold stress 2h (Nie et al., 2022)
cold stress 0h (Nie et al., 2022)
light (Watson‐lazowski et al., 2020)
glacial (Watson‐lazowski et al., 2020)
control (Watson‐lazowski et al., 2020)
- 2.81 - - - - -
- 1.08 0.37 0.23 -0.4 -0.58 -0.0
-0.76 0.98 0.2 0.05 -0.34 -0.9 -0.13
- 1.27 1.28 1.12 - - -
-1.67 1.43 - 0.92 - -0.53 0.5
- 1.99 - - - 1.6 -
-2.66 1.75 -0.24 0.08 -0.83 -2.93 -0.17
- 1.1 1.16 -2.75 -2.13 - 1.17
- 1.35 -1.28 -0.83 1.14 -1.15 -0.28
-0.29 0.63 0.08 -0.1 -0.94 -0.13 0.27
-0.29 - -0.34 1.69 - - 1.11
- 2.65 - -0.48 - - -
- 1.42 - 0.55 - - 1.51
- 2.81 - - - - -
- 1.93 - -0.21 1.21 - -
-0.1 1.14 -0.79 -0.07 -0.13 -0.47 -0.52
- 1.34 0.66 0.79 - -1.22 -0.47
- 1.81 - - - - 1.81
0.28 1.81 - - - 0.6 -0.38
- 1.71 - -0.23 - -0.66 1.16
- 2.81 - - - - -
- 2.06 - - - 0.49 0.51
-1.27 1.33 -3.54 0.13 0.5 -0.05 -0.98
-2.78 1.27 0.89 -0.03 -0.64 -1.18 -0.89
- -0.42 1.58 -1.56 - 0.96 -0.02
- 1.45 - -0.54 1.04 -1.99 0.35
-0.95 1.16 -0.01 - -0.61 - 1.38
-0.32 0.45 -0.0 0.08 -0.28 -0.04 -0.03
- 1.58 - - - 0.41 1.43
-1.08 1.16 0.43 0.46 -1.63 -1.1 -0.35
- 2.58 - - - - 0.01
-0.47 2.65 - - - - -
-1.08 1.5 0.41 0.03 -0.42 -1.9 -1.56
-0.44 2.09 -1.3 0.26 -1.86 -2.89 -
0.92 1.38 - - 0.52 -1.51 -0.49
- 1.58 - - - - 2.0
-0.31 2.33 0.22 - - - -
- 2.81 - - - - -
-1.25 1.51 - 0.56 1.18 - -
- 2.7 - -1.02 - - -
- 2.81 - - - - -
-0.86 0.27 0.18 0.43 -0.31 0.1 -0.17
-0.72 1.05 -1.53 -0.9 -0.12 0.31 0.36
-0.88 1.12 -1.67 -0.33 0.54 -0.0 -0.47
0.03 1.36 -1.48 -0.2 0.1 -0.51 -1.3
- 1.6 0.28 1.46 - - -
-0.58 1.09 -0.48 -0.47 0.25 -0.34 -0.35
- 2.6 - - - - -0.1
- 2.63 - -0.32 - - -
- 0.85 1.17 - - - 1.56
- 2.81 - - - - -
- 2.81 - - - - -
-0.43 2.08 - -0.64 - - 0.47
- 2.39 -1.16 -0.39 -1.7 -2.73 -3.68
- 2.81 - - - - -
-0.36 1.75 -1.0 -0.55 0.63 -3.86 -3.85
- - - 2.81 - - -
-0.06 1.19 -0.5 -0.17 -0.46 -0.23 -0.79
- 1.6 - - - - 1.99
-0.89 1.13 -0.53 0.43 -0.73 -0.38 -0.21
0.25 1.2 -1.38 -0.52 - - 1.28
- 2.47 - - - - 0.55
-0.53 2.13 0.26 -1.46 - -1.49 -
0.86 1.78 - - - 0.8 -
- 1.65 - - - - 1.95
- 2.81 - - - - -
- 2.81 - - - - -
-5.81 1.62 -0.09 0.45 -1.23 -1.73 -0.2
- 2.32 - -0.28 0.24 - -
- 2.81 - - - - -
-1.83 0.87 1.24 0.69 - -2.19 -0.51
-0.36 2.17 - -0.55 - -0.98 -0.96
-1.68 1.72 0.85 - - -0.34 -0.32
- 2.27 - - - 1.11 -
- 1.71 - -0.02 -0.55 - 1.04
0.53 2.47 - - - - -
-0.02 0.93 -0.07 0.37 - - 0.9
-1.43 2.52 - -2.62 - - -0.45
- 2.81 - - - - -
- 1.83 - - 1.79 - -
- 2.31 - - - - 1.03
- 1.96 - - - 0.04 1.06
- 2.51 - - - - 0.37
-0.36 0.58 0.5 0.6 -2.14 -2.17 0.43
- 2.81 - - - - -
-0.31 1.58 - -1.04 0.45 -1.58 0.02
- 1.92 - - - - 1.69
0.52 0.46 0.47 -1.85 -1.36 -0.79 0.65
- 2.81 - - - - -
- 2.27 - 1.13 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.