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Heatmap: Cluster_115 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
cold stress 168h (Nie et al., 2022)
cold stress 24h (Nie et al., 2022)
cold stress 2h (Nie et al., 2022)
cold stress 0h (Nie et al., 2022)
light (Watson‐lazowski et al., 2020)
glacial (Watson‐lazowski et al., 2020)
control (Watson‐lazowski et al., 2020)
- - - 1.42 - 1.39 0.76
-1.81 -1.48 -0.57 0.57 0.93 0.47 -0.12
-0.68 - 0.97 0.38 -1.25 0.53 0.32
- 0.7 0.15 0.68 -0.77 -0.58 0.49
-4.88 -1.33 -0.9 0.56 0.85 0.47 0.46
-2.61 0.05 -0.88 0.95 -0.81 0.32 0.59
- -1.33 0.8 0.23 0.24 0.68 -0.16
-0.67 -1.07 0.4 0.4 0.17 0.05 0.13
-0.54 -0.21 0.2 -0.43 -0.36 0.23 0.68
-0.85 -1.29 0.77 0.76 0.43 -0.68 -0.57
- -3.2 0.64 -0.53 0.84 -0.27 1.01
-0.33 -0.39 0.67 -0.63 0.65 -1.25 0.28
- -1.26 -0.35 0.64 -0.65 -1.87 1.74
-2.29 -1.12 -1.38 1.1 -0.06 -1.23 1.28
- -0.77 0.48 1.1 -0.22 -1.44 0.72
-7.18 -2.8 -0.67 1.27 0.04 -0.98 1.18
- - -2.02 -0.17 1.52 0.79 0.35
- -0.54 - 1.09 0.16 - 1.62
- -3.92 -0.75 1.23 1.35 -0.16 -0.88
- -1.73 1.08 0.72 -1.89 0.4 0.42
- - 1.16 - 0.27 1.24 0.26
- - - - - 1.8 1.82
0.3 0.4 -0.73 0.61 -0.22 -1.04 -0.03
-1.78 -0.08 0.15 0.04 0.11 0.16 0.52
-0.81 -0.54 -2.28 0.52 0.33 0.4 0.61
-0.25 -0.89 -2.88 0.78 0.53 0.68 -0.48
-3.57 -3.63 -0.06 0.81 0.97 0.14 0.09
-1.62 0.52 -0.68 0.75 0.56 -1.59 0.17
-1.28 -0.11 0.16 0.4 0.86 -0.48 -0.52
-2.79 0.07 -0.26 0.48 0.56 -0.82 0.61
- - - - - - -
- - - - - - 2.81
-2.38 - 0.42 0.43 0.18 -0.11 1.04
-3.17 -1.96 0.13 1.05 0.18 -0.14 0.5
-0.6 -2.15 -0.52 0.46 0.74 0.24 0.25
- - - - - - 2.81
-3.17 -1.22 -0.09 -0.97 1.45 0.46 -0.13
- - - - 1.88 0.85 0.6
-0.19 -2.05 -0.32 0.88 0.25 -0.1 0.17
-5.56 -0.43 -1.77 1.89 -1.65 -1.3 0.61
-2.05 0.2 -0.71 0.07 0.97 -0.08 0.05
- - -1.93 -3.14 1.31 1.1 1.0
- - -0.34 0.63 0.62 1.07 0.05
-1.25 -1.3 -1.3 1.37 0.1 0.07 0.09
- - - - 2.39 - 0.81
- -2.24 -1.32 -1.19 1.14 0.94 0.87
-0.95 -1.74 0.27 0.79 -0.29 0.1 0.44
-0.29 -0.77 -0.54 0.47 0.41 -0.01 0.27
-0.59 -0.02 -3.1 - 0.92 1.0 0.41
-1.15 0.26 -1.96 -0.1 -0.05 0.32 0.96
-4.8 -0.28 -1.15 1.09 0.52 0.55 -0.62
- 0.08 0.25 -0.05 0.54 0.68 -0.47
-1.11 0.57 0.71 0.44 -1.27 -0.71 0.04
-0.79 -4.63 -2.27 -0.11 0.82 0.33 1.15
-2.3 -1.36 0.97 0.32 0.11 -1.92 0.9
-1.51 -1.57 1.44 0.88 - -1.19 0.41
- - - - 1.67 1.01 0.86
- 0.06 0.39 1.36 -2.1 -1.12 0.48
- - - - 0.36 0.33 2.16
-1.87 -1.92 0.42 0.8 0.41 0.28 -0.24
- 0.68 -0.39 1.77 - -0.48 -0.95
-0.88 0.04 0.19 0.01 0.42 -0.11 0.02
-4.71 -1.31 0.66 0.95 -0.57 0.84 -0.8
0.18 -1.16 -0.24 -0.25 0.73 0.25 -0.17
-2.07 -1.56 0.62 -0.05 -0.17 0.33 0.82
-1.4 - 1.79 -1.6 0.51 -0.1 -1.08
- -0.72 0.93 -0.45 -0.99 0.99 0.34
-1.86 - -2.92 -0.26 1.55 0.45 0.56
-2.44 -0.76 0.01 0.64 -0.05 0.79 -0.06
- 1.58 - - - 0.41 1.42
- -0.66 0.56 0.43 0.68 -0.22 0.12
-2.21 0.03 0.03 0.4 0.03 0.24 0.28
-0.4 0.02 -1.75 0.39 -0.1 0.19 0.63
-1.53 -1.04 -0.61 0.59 0.51 0.52 0.19
-3.7 -0.69 0.08 0.55 0.78 -0.03 0.12
-2.48 -2.41 -0.45 0.32 0.89 0.29 0.66
0.09 -0.45 - -0.32 1.01 0.25 0.26
- - -0.2 0.3 1.0 -1.35 1.33
-1.9 -2.79 -0.08 0.7 0.18 0.79 0.22
-1.57 - -3.63 0.13 1.32 0.71 0.43
-6.1 -1.57 0.29 0.26 0.95 0.25 0.15
- - - -0.48 1.08 0.47 1.48
-2.73 -0.45 -0.28 0.63 0.76 -0.04 0.12
- - - - - - -
-1.64 0.52 0.29 0.19 -0.02 -0.25 0.08
-4.74 -4.79 0.51 0.58 1.4 -0.71 -0.43
-0.38 -1.94 0.34 -1.07 -0.27 0.42 1.04
-0.23 -1.27 0.15 0.44 0.54 -0.38 0.06
0.36 0.31 - 0.17 - 0.74 0.75
- - 1.16 0.76 0.47 -0.33 -0.16
-1.56 -0.0 0.55 -0.02 0.53 -0.26 -0.11
-5.56 0.12 -0.06 0.66 0.33 -0.56 0.51
- - - - - - -
-3.31 -0.32 -0.65 -0.94 0.47 -3.13 1.78
- - - - - - -
-6.01 -0.34 -1.98 0.99 0.54 0.23 0.41
- -4.39 0.58 0.76 0.85 0.13 -0.2
-3.28 0.17 -0.06 -0.1 0.28 0.91 -0.35
- -0.62 -3.51 0.78 1.31 -0.15 0.22
- 0.44 -0.51 -0.22 -0.02 -0.04 1.09
-0.92 -0.54 -0.1 0.74 0.08 -0.13 0.27
- 0.07 -2.52 1.21 0.53 0.24 -0.26
- -2.1 0.22 0.05 1.01 -0.41 0.84
-3.35 -0.52 0.08 0.86 -0.09 0.94 -1.09
- - 2.81 - - - -
- -0.51 0.97 0.29 -0.08 -1.76 0.91
-1.49 -0.24 -0.76 0.86 0.51 0.26 -0.37
-3.29 - -0.14 0.56 1.02 0.1 0.5
- - - - - - -
- -0.75 1.26 0.11 - 0.53 0.56
-2.16 -0.41 -1.6 0.21 0.45 0.26 0.97
- -2.17 0.91 0.74 0.25 0.19 -0.17
-3.85 0.42 -0.22 0.6 0.59 -1.4 0.41
-2.39 -2.44 -0.12 - 1.32 0.78 0.57
-2.24 -0.2 -0.02 0.06 0.82 0.06 0.1
- -1.79 1.21 -0.93 1.63 - -0.38
-2.44 0.1 0.42 0.62 -0.21 -0.59 0.42
-2.27 -1.32 -0.07 -0.21 0.14 -0.18 1.38
- - - 1.88 - 1.26 -0.14
- -2.98 0.27 -0.42 1.42 0.57 -0.41
-2.08 -0.07 -0.01 0.54 0.34 -0.56 0.51
- -0.69 -1.43 0.43 1.18 0.35 0.17
- -0.42 -0.33 0.4 0.34 0.45 0.59
-1.76 0.81 -0.26 0.07 0.14 -0.83 0.49
- -0.92 -0.69 0.83 0.19 -0.14 1.02
1.62 - - 0.69 - 0.62 -0.36
-2.91 -2.38 -1.38 -0.19 0.5 0.37 1.44
-0.91 -2.28 - -1.61 0.88 1.39 0.55
-1.46 0.18 0.57 -0.34 0.65 -0.86 0.16
- 0.5 - 0.36 0.53 0.83 0.12
- 0.66 - 0.06 1.35 -2.48 0.72
-1.54 - -0.6 0.25 - 0.99 1.5
-3.39 -0.63 0.95 0.23 -0.39 0.46 0.01
-2.8 -1.27 -2.53 0.85 1.03 0.36 0.2
- -0.23 -1.17 1.1 0.6 -0.28 0.29
-0.2 0.14 0.34 -0.84 -0.04 -0.02 0.32
-0.61 -1.93 -0.93 -0.02 0.77 0.24 0.76
- - - - - - -
-4.95 -2.69 -1.64 0.66 0.75 0.14 1.08
-1.02 -2.07 -0.34 0.21 0.81 0.22 0.49
- -1.17 -0.66 0.05 0.95 0.44 0.67
- -3.43 -2.41 -1.15 1.46 0.97 0.63
- -2.08 -2.42 -1.12 1.4 1.03 0.52
- - -0.58 -0.53 1.23 0.96 0.44
-1.46 -0.64 0.14 0.82 -0.02 -0.12 0.29
- - - 1.48 - - 2.08
- - 1.36 - 1.16 0.13 0.15
-0.99 0.2 -0.04 -0.63 0.05 0.29 0.56
- 0.19 1.87 -0.68 -1.66 -2.69 0.13
- - - - - - 2.81
-1.66 -1.07 0.23 0.47 0.17 0.31 0.37
-0.76 - -0.81 - 0.56 1.54 0.56
- -0.98 0.61 -0.37 0.5 0.69 0.22
-0.49 -2.81 -0.55 0.26 0.65 0.18 0.64
- - -1.3 - 1.41 0.65 1.25
-2.08 -0.35 0.62 0.44 0.37 -0.47 0.11
- - - 1.49 - 2.07 -
-3.25 -0.43 -2.08 1.57 0.0 -0.16 0.06
- 0.35 0.21 1.12 -0.36 -2.0 0.45
- -1.21 1.79 -0.35 0.22 - 0.21
-1.8 -0.27 0.79 0.25 -0.39 0.0 0.27
2.81 - - - - - -
- - - - 0.38 1.23 1.75
- - - - - - -
0.12 -1.04 0.27 0.67 -1.39 0.19 0.14
-2.51 -1.94 -0.7 0.2 1.17 -0.2 0.75
- -2.15 0.66 1.03 1.2 -0.82 -1.8
-0.39 0.38 -0.81 -0.58 0.85 -3.18 0.83
- - - - - - -
- -0.53 0.23 0.02 0.46 0.11 0.73
-2.91 -0.62 0.42 0.5 0.05 0.67 -0.25
-1.35 0.18 -1.34 0.67 0.2 0.44 -0.01
-2.5 0.43 0.03 1.16 -1.14 0.1 -0.54
- - - - 1.49 - 2.07
-4.38 0.19 -1.23 0.03 0.56 -0.59 1.15
-5.52 0.78 -1.93 0.22 0.09 -0.56 1.07
- 0.17 - - - 0.54 2.15
- 1.18 - 1.36 0.54 -0.48 -
-2.1 -0.09 0.68 0.32 -0.09 0.04 0.02
-2.58 1.18 -0.63 1.24 -0.15 -2.18 -1.17
-1.02 -0.71 -0.3 0.02 0.57 0.54 0.18
-3.09 -1.55 1.18 0.73 - -1.13 1.11
- - - - - - -
-1.88 -0.07 0.19 -0.0 0.76 -0.53 0.32
-3.49 -1.67 0.73 0.03 1.04 -0.08 -0.12
-5.35 -0.52 0.77 -0.33 0.72 -0.04 0.21
-4.25 -0.69 -0.71 0.89 1.04 -0.65 0.23
-0.47 0.63 -0.39 0.05 0.29 0.18 -0.8
- 0.01 0.5 -1.86 1.16 -0.06 0.15
-1.41 0.27 -0.43 0.14 0.43 -0.6 0.66
-4.02 -3.49 -4.07 -0.35 1.35 0.96 0.59
-4.62 -0.38 -0.24 0.71 0.56 0.3 0.01
- -1.16 -2.07 0.72 0.85 0.3 0.7
-2.97 -0.22 0.27 0.54 0.32 -0.12 0.24
-0.0 -0.06 -2.86 -0.2 0.51 0.05 0.66
- - 1.34 0.29 1.02 -0.73 -0.7
-4.08 -2.02 0.48 0.73 -0.45 -1.48 1.35
-1.78 -2.17 0.16 -0.37 0.84 0.32 0.64
-2.71 -2.07 0.54 0.55 0.1 0.13 0.6
- - -1.38 0.62 0.99 0.19 0.97
- - -4.06 0.98 0.59 0.11 1.25
-1.65 0.36 0.19 -0.16 0.43 -0.18 0.19
-5.66 -1.32 -2.36 0.63 0.88 0.14 0.92
-2.53 -1.51 0.39 0.02 0.22 0.38 0.75
-4.82 -0.37 0.61 0.52 -0.07 0.05 0.31
-2.48 - -1.94 -0.21 1.39 -0.09 1.09
- - - 1.91 - 0.94 0.4
- -5.04 -1.83 0.51 1.04 0.52 0.83
-1.55 -0.41 -0.24 0.15 1.02 -1.83 0.71
-1.76 -0.81 0.59 -0.53 0.78 0.17 0.13
-1.86 -0.11 0.26 0.25 0.19 -0.06 0.39
-0.89 -4.12 -0.21 0.93 1.03 -0.5 -0.2
- - -1.17 0.51 1.25 0.82 -0.01
- - - - - - -
- 0.02 -0.3 0.51 0.31 -0.72 0.93
- - 0.88 -1.84 1.29 -0.32 0.7
- -0.9 - 1.21 -0.46 -0.9 1.53
- - 1.17 -0.55 - 1.61 0.04
- 0.83 -2.81 -0.25 0.64 1.0 -0.57
-1.3 -0.5 -0.59 0.47 0.8 0.19 -0.07
- - 1.95 1.08 - 0.03 -
- -0.85 1.06 0.6 0.29 -1.27 0.28
-2.07 -1.28 -2.44 0.12 0.94 0.09 1.06
-0.61 -0.66 0.56 0.43 1.21 -1.82 -1.8
- - - - - - -
-1.73 -3.37 -0.1 0.43 1.05 0.08 0.26
- - -0.32 -0.46 0.34 1.01 1.13
- - - 0.96 0.54 0.52 1.12
- -3.52 -2.51 0.59 1.33 0.55 0.33
-1.7 -0.27 -0.41 -0.23 0.37 -0.01 0.98
- -3.14 -1.81 0.93 0.96 -0.06 0.84
-1.67 0.69 0.75 0.53 -2.42 -2.45 0.65
- - - - - - -
-3.1 -2.3 0.19 0.42 1.01 0.18 0.08
-1.47 -0.23 -0.48 0.68 0.1 0.1 0.39
- - - - - 2.81 -
- - - - - - 2.81
-2.49 -0.05 0.09 0.38 0.32 -0.09 0.38
-0.64 -2.23 0.75 0.11 0.16 -0.5 0.64
-4.64 -1.06 -0.1 -0.68 0.74 1.04 0.27
-0.19 -1.04 -0.17 0.7 0.07 -0.38 0.38
- 0.22 -0.47 0.72 0.65 -1.31 0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.