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Heatmap: Cluster_40 (Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
cold stress 168h (Nie et al., 2022)
cold stress 24h (Nie et al., 2022)
cold stress 2h (Nie et al., 2022)
cold stress 0h (Nie et al., 2022)
light (Watson‐lazowski et al., 2020)
glacial (Watson‐lazowski et al., 2020)
control (Watson‐lazowski et al., 2020)
- - 1.59 1.44 - - 0.36
- 0.41 2.0 -0.73 - -2.5 -0.16
-2.06 -0.69 1.52 -0.58 -0.0 -0.94 0.11
-2.55 - 1.98 0.43 - -2.19 0.41
- -0.34 2.25 -0.15 -0.88 - -
-2.48 0.2 1.01 0.98 -0.7 -1.37 -0.54
-0.61 -1.17 1.56 0.2 -0.33 -0.57 -1.53
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.81 - - - -
- 0.84 2.38 - - - -
- - 2.81 - - - -
-0.77 -3.16 1.8 0.56 -0.08 -3.41 -1.76
- - 2.81 - - - -
- 0.42 2.31 -2.52 - - -0.95
-4.03 -4.08 2.24 0.59 -1.04 -2.66 -
-3.02 1.38 1.68 0.11 - - -
-1.74 - 1.82 1.23 -0.96 -1.98 -3.89
-0.4 -0.09 0.98 -0.59 0.07 -0.54 -0.11
-0.64 -0.87 1.73 0.17 -1.02 -1.57 -0.9
- - 2.81 - - - -
0.49 - 2.32 -0.7 - - -
-1.4 0.13 1.35 1.58 - - -
- -0.52 2.08 -0.23 -1.19 -2.93 -0.6
- -1.98 2.11 -0.53 -0.52 -0.54 -1.53
- - 2.12 - - 0.92 -0.39
-0.95 0.75 0.63 -0.23 0.55 -1.14 -1.02
- 1.13 2.24 -3.7 - - -
- - 2.58 0.01 - - -
- 1.22 2.22 - - - -
- - 2.81 - - - -
- 0.88 1.78 0.09 - -1.61 -1.59
- - 2.39 - - -1.25 0.41
0.14 - 2.44 -1.03 - - -
-1.79 -0.2 2.05 0.37 -2.25 -4.28 -2.67
- - 2.81 - - - -
- - 2.57 0.1 - - -
- -3.36 2.58 -0.33 - -3.0 -
-0.64 - 2.12 -0.02 - -1.28 -0.68
- -0.52 1.68 0.45 0.1 -2.93 -0.91
- -0.63 1.84 - 0.68 0.24 -
-0.83 0.02 1.64 0.06 -1.45 -0.67 -1.88
- -3.42 2.04 -0.38 -0.39 -0.68 -0.67
- - 2.08 -0.76 - 0.8 -1.18
- -0.42 1.85 1.19 -2.48 -3.5 -3.48
- - 2.81 - - - -
- - 2.38 0.48 - -1.3 -
0.85 - 2.38 - - - -
- -0.12 2.21 - -0.78 -1.8 -0.78
- -1.36 2.23 -1.49 - 0.05 -0.93
-1.52 - 1.88 0.58 -0.45 -1.46 -1.42
-0.8 -0.04 1.05 0.55 -0.75 -0.98 -0.28
- - 2.81 - - - -
- - 2.81 - - - -
0.1 0.05 2.12 - - - -0.86
- - 2.81 - - - -
- -0.94 1.87 0.51 0.49 - -
-2.22 -1.28 1.98 - -0.87 -0.9 0.44
-1.02 -0.08 2.09 0.37 - - -
- 1.22 2.22 - - - -
- -0.78 2.07 0.5 - -0.92 -1.9
- - 2.81 - - - -
- - 2.48 0.5 - - -
- 0.71 1.94 0.33 - - -1.93
- - 2.63 -0.32 - - -
-0.93 0.85 1.26 0.38 - -0.91 -1.15
- 0.48 2.49 - - - -
- 0.92 2.35 - - - -
- - 2.64 - - -0.41 -
- - 2.81 - - - -
-0.2 -0.95 1.88 -0.92 -0.91 -0.94 -1.51
0.57 0.35 1.7 -0.6 -3.75 -2.93 -2.99
- - 2.81 - - - -
- 1.08 2.19 -1.64 - - -
- - 2.65 -0.49 - - -
- - 2.81 - - - -
- - 2.81 - - - -
- -0.56 2.44 - - -0.16 -
- - 2.56 0.16 - - -
-1.31 - 1.88 - -0.9 1.07 -1.91
0.72 0.52 1.38 -0.44 -3.06 -2.45 -1.8
0.58 0.46 1.64 -2.62 -0.68 -2.71 -3.69
- - 2.39 0.83 - - -
-0.74 -0.8 1.88 0.75 - -1.11 -
- - 2.45 -0.13 -0.67 - -
- - 2.28 - - 1.1 -
-2.6 -1.08 2.67 - - - -
- - 2.81 - - - -
- -1.19 2.71 - - - -
- 0.9 1.49 0.77 - -0.67 -
- - 2.81 - - - -
- 1.22 2.22 - - - -
0.02 - 2.14 -0.29 - -0.61 -3.18
0.32 -1.15 1.51 0.71 -0.3 - -
- - 2.39 - 0.82 - -
- -0.45 2.36 -0.59 -1.64 - -2.64
- - 2.81 - - - -
- - 2.13 0.34 0.1 - -1.91
- - 2.81 - - - -
- - 2.81 - - - -
-0.16 -1.22 2.11 -0.35 - -0.79 -
- - 2.33 0.97 - - -
- - 2.81 - - - -
- - 2.81 - - - -
-1.42 0.58 1.21 -1.23 0.11 -0.56 -0.65
-1.73 -0.2 2.06 -3.5 -0.93 -0.96 -0.94
- -3.03 2.64 -0.68 - - -
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.81 - - - -
- - 1.88 -0.25 - 0.3 0.31
-1.84 0.16 0.77 0.74 -0.54 -0.82 -0.04
- - 2.81 - - - -
-1.28 - 1.69 0.72 -2.74 0.04 -0.94
0.71 0.48 1.13 0.09 -2.17 -2.35 -1.79
- -1.69 1.94 0.05 -0.24 -0.27 -2.84
- - 2.81 - - - -
- - 2.81 - - - -
- -1.04 1.42 0.41 -0.57 -1.02 0.41
- - 2.34 0.73 - -1.91 -
- -1.65 2.74 - - - -
- 1.22 2.23 - - - -
- - 2.12 0.11 - -0.94 0.08
- - 2.63 - - -0.34 -
- - 2.18 1.31 - - -
- 0.37 2.18 0.23 - - -
- - 2.19 -1.21 0.2 -0.82 -1.79
-1.76 0.46 1.52 0.23 -1.07 -1.36 -1.29
- - 2.81 - - - -
-2.16 -0.53 2.46 -1.08 - - -3.09
-1.78 -0.13 1.49 0.62 -0.36 -2.39 -1.05
0.61 0.78 1.18 0.01 -2.32 -2.86 -2.78
-0.84 0.63 -0.73 0.14 0.56 -0.3 -0.13
- - 2.81 - - - -
- - 0.33 1.39 -1.67 -0.11 0.92
- - 1.87 1.74 - - -
-0.32 - 2.63 - - - -
- -0.37 2.64 - - - -
- - 2.56 - - -0.87 -0.85
-0.42 -1.13 1.35 0.87 -0.58 -1.6 -1.26
- -2.13 2.6 -1.85 -2.26 -2.29 -
- 1.48 2.07 - - - -
-5.17 0.61 1.7 0.39 -2.79 -2.23 -0.89
0.48 0.6 0.78 0.38 -2.19 -1.83 -0.81
-0.98 -3.62 2.09 -0.17 0.1 -3.25 -3.23
- - 1.66 0.88 0.69 -1.33 -
- 0.4 2.21 -0.73 - - -1.14
- -0.75 2.26 0.69 - - -
- - 2.11 - - 1.42 -
- -1.05 2.4 0.09 - -2.49 -
- - 2.81 - - - -
-0.06 -0.05 0.41 0.98 -0.62 -0.42 -1.41
-0.58 0.34 2.17 -0.81 - - -
- - 2.72 - - -1.26 -
- - 2.51 -0.08 - -1.54 -
- - 2.81 - - - -
- - 2.81 - - - -
- 1.22 2.22 - - - -
-0.36 -0.04 1.91 -1.07 -0.71 -2.32 -2.31
- - 2.81 - - - -
-0.88 1.07 1.83 -0.33 - - -
0.86 - 2.13 -0.33 - - -
- -0.3 1.92 -0.72 0.01 -1.76 -1.01
- -0.5 1.5 -0.64 - 0.9 -0.08
- - 2.81 - - - -
-1.12 -0.77 1.88 0.91 - - -1.34
-0.91 -0.45 1.94 0.09 -1.77 -2.79 -1.32
-2.12 - 2.63 -0.75 - - -
- - 1.46 - 0.49 0.49 0.53
-0.64 0.63 1.41 -1.41 -0.24 -0.53 -2.1
- -2.04 2.61 -0.59 - - -
- - 2.43 - - -0.35 -0.3
- -0.2 1.88 0.35 - -0.27 -1.48
- - 2.81 - - - -
- - 2.81 - - - -
- -2.15 1.57 1.29 - -1.9 0.13
-2.0 -0.42 1.74 -0.66 -0.22 -0.58 -1.0
- -1.22 2.45 0.15 - - -
0.53 -0.11 2.21 - - - -
- -2.98 2.66 -1.0 - -4.13 -
-1.95 1.0 2.25 - - - -
- - 1.35 0.21 0.73 -0.3 -0.28
- 1.02 2.02 -0.12 - - -
0.58 -0.31 -0.18 1.02 -0.91 -0.69 -0.67
-1.48 -0.19 1.83 0.04 -1.23 -2.0 -0.98
- -0.79 1.82 0.96 - -2.51 -0.37
- - 2.81 - - - -
-4.26 -1.51 2.52 -1.64 -1.87 -2.9 -2.89
- - 2.24 1.03 - -2.11 -
1.72 - 1.89 - - - -
-1.34 - 0.42 1.47 -0.4 -1.01 0.33
-0.67 -0.14 1.08 0.17 0.42 -0.78 -1.76
- -1.72 2.68 -1.86 - - -
- -4.25 0.88 0.52 -0.0 0.48 0.35
- 0.48 2.49 - - - -
- - 2.28 - - 1.11 -
- - 2.67 - - - -0.69
- - 2.66 - -0.54 - -
- - 2.81 - - - -
- - 2.39 0.06 - -0.49 -
- 0.79 2.17 -1.67 - - -1.12
- - 2.81 - - - -
-1.51 1.31 1.02 0.88 - -1.73 -
- - 2.81 - - - -
- - 2.25 - - 1.17 -
- - 2.08 0.14 - - 0.74
-1.64 - 2.4 0.49 - - -
- - 2.81 - - - -
-1.97 -0.83 2.11 0.67 - -1.9 -
-1.37 -0.85 1.86 -0.02 -0.47 -1.38 -1.54
- - 2.81 - - - -
-0.85 -1.24 1.83 -0.07 -0.47 -1.5 -1.16
- - 2.52 0.33 - - -
-0.43 0.01 0.99 0.31 -0.58 -0.54 -0.59
- -0.78 2.68 - - - -
- 0.72 1.73 - - 1.02 -
-0.1 -0.32 1.79 -0.37 -1.36 -2.97 -0.96
0.57 -2.48 1.43 0.63 -2.01 -2.04 -0.71
0.63 - 2.45 - - - -
- - 2.39 - - 0.8 -
-0.27 - 2.09 -0.49 -0.73 -0.74 -
-3.34 0.51 1.51 0.27 -0.94 -0.27 -3.95
- - 2.54 - - -0.75 -0.74
0.53 -1.85 2.4 - - - -
-0.07 -3.13 1.96 -0.09 -1.66 -1.69 -1.09
- - 2.81 - - - -
- - 2.81 - - - -
- - 2.18 0.89 - -1.73 -1.71
-0.05 -0.65 1.06 -0.34 0.46 -1.41 -0.39
- -0.99 2.33 -1.13 - -0.6 -1.58
- - 2.81 - - - -
-1.99 0.83 0.7 1.09 0.14 - -3.19
-0.34 -1.35 1.33 0.8 -0.99 -0.92 -0.9
- - 2.81 - - - -
-0.47 - 2.65 - - - -
-0.82 -1.03 1.69 0.62 -0.75 -0.97 -3.76
-0.84 0.1 2.43 - - - -
- 0.15 2.26 0.15 - - -
- - 2.81 - - - -
-0.13 -2.68 2.22 -1.08 - -1.01 -1.81
- - 2.81 - - - -
-0.5 0.14 0.89 0.02 -0.07 -0.61 -0.47
- - 2.81 - - - -
- - 2.04 1.09 - -0.39 -
- - 2.4 - - 0.79 -
-1.12 -0.29 1.3 0.52 - -0.66 0.25
-0.44 0.65 1.51 -0.36 -1.34 -0.56 -
- - 2.81 - - - -
- -0.25 2.24 0.29 - -2.15 -
- 1.12 0.72 -0.41 -0.3 -0.32 -0.31
- - 2.4 - - 0.79 -
- -1.34 2.42 0.27 - - -4.34
- - 2.81 - - - -
1.08 -0.36 1.23 0.64 -2.28 - -
- 0.82 1.15 1.59 - - -
- -0.79 1.39 0.89 -0.34 - 0.23
- -0.4 2.06 - - -0.96 0.64
- - 2.81 - - - -
-0.44 -0.73 0.78 0.87 -0.68 -0.6 -0.27
- - 2.81 - - - -
- - 2.19 1.28 - - -
-0.72 - 1.55 - - 1.2 0.22
-1.61 0.33 1.63 0.28 -2.31 - -0.14
0.9 0.25 1.58 -1.9 - -1.58 -1.54
-1.3 - 2.64 -1.51 - - -
- - 2.32 1.01 - - -
- - 2.28 1.09 - - -
-0.78 -0.38 1.45 0.67 -2.4 -0.84 -0.82
- - 2.81 - - - -
- 1.52 2.05 - - - -
- - 2.08 - - 1.47 -
-8.78 -0.95 2.48 -0.71 -2.39 -5.13 -4.12
-0.97 -0.02 1.22 -0.09 -0.05 -1.25 -0.23
-0.11 -0.1 2.29 -3.04 -3.07 - -
- - 2.45 -0.69 -0.14 - -
- - 2.81 - - - -
0.68 - 1.91 -2.32 -0.78 -1.8 -0.78
- - 2.81 - - - -
0.15 0.57 1.75 -0.79 - -1.1 -
-0.96 -0.53 2.25 -0.9 - -1.01 -
-1.98 0.79 2.01 -0.49 -3.85 -2.55 -4.85
1.65 -0.15 - 1.37 - -2.47 -2.44
-0.95 -0.42 1.9 0.52 -2.13 - -1.56
- - 2.81 - - - -
- - 2.37 0.22 -0.58 - -
-1.2 -0.67 2.33 -0.39 - -2.83 -
-0.65 -0.12 1.47 0.15 -0.36 -2.38 -0.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.