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Heatmap: Cluster_322 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-2.6 -0.64 0.94 1.37 0.66 0.47 0.38 -1.51 -0.3 -0.02 1.1 0.61 -2.46 -2.94 -4.04 -2.11
-0.39 -1.79 0.93 1.38 0.33 0.87 -0.65 -0.7 -0.64 -0.53 0.34 -0.38 0.14 -0.88 -1.17 -0.66
-7.22 -3.07 1.58 1.74 -0.53 0.61 -2.6 0.05 0.61 0.48 0.76 0.51 -5.6 -7.24 -5.17 -4.92
-0.94 -1.51 0.87 1.13 0.21 0.5 -0.13 -0.6 0.14 0.04 0.77 0.63 -0.86 -1.7 -2.01 -1.05
0.11 -0.83 0.37 0.69 0.3 0.49 0.33 -0.34 -0.28 -0.09 0.76 -0.18 -0.16 -0.97 -1.72 -0.44
-0.57 -1.0 0.64 0.98 0.41 0.46 -0.22 -0.54 -0.09 0.29 0.65 0.38 -0.61 -1.19 -1.7 -0.69
-0.48 -1.1 1.28 1.49 0.43 0.0 -1.43 -1.32 0.52 0.41 0.79 0.1 -2.33 -2.32 -2.65 -1.57
-0.97 -2.24 1.05 1.47 0.27 1.17 -0.64 -1.01 -0.67 -0.01 0.7 0.2 -1.07 -1.57 -2.4 -1.16
-0.34 -1.44 0.48 0.88 0.55 0.24 -0.15 -0.63 -0.02 0.29 0.83 -0.15 -0.2 -0.87 -1.34 -0.47
-0.45 -1.24 0.91 0.94 0.77 0.84 -0.35 -0.68 -0.28 0.11 0.49 0.07 -0.84 -1.6 -1.91 -0.65
-0.04 -1.51 0.39 0.72 0.26 0.64 -0.22 -0.63 -0.44 0.16 0.77 -0.04 0.06 -0.62 -1.24 -0.28
-0.67 -2.18 0.64 0.67 0.76 0.29 0.24 -0.29 -0.19 -0.07 0.16 -0.18 0.41 -0.86 -1.74 0.1
-0.71 -1.32 0.71 1.37 0.09 0.24 -0.25 -0.68 0.33 0.66 -0.01 0.5 -1.02 -1.33 -1.55 -0.78
-0.44 -0.79 0.33 0.71 0.38 0.17 0.38 -0.32 0.29 0.29 0.62 0.23 -0.74 -1.18 -1.39 -0.54
-0.25 -0.42 0.71 1.09 0.43 0.03 0.1 -1.01 -0.17 0.45 0.7 0.45 -1.28 -1.36 -2.23 -1.18
-0.46 - 1.12 1.11 0.82 0.72 -1.08 -0.77 -0.82 -1.91 1.21 -0.49 0.58 -1.78 -1.05 -1.54
-1.47 -1.28 0.72 1.22 0.64 0.02 0.64 -1.2 0.16 0.24 0.94 0.62 -2.13 -2.34 -2.17 -1.9
-0.79 -1.82 0.96 1.4 0.63 0.75 -0.25 -0.91 -0.56 0.04 0.64 0.31 -1.26 -1.54 -1.85 -1.29
-0.29 -1.94 1.14 1.28 0.07 0.06 0.08 -0.29 -0.1 -0.27 0.72 -0.37 -0.36 -1.14 -1.66 -0.82
-0.81 -0.95 0.71 1.24 0.58 -0.03 0.32 -0.54 -0.02 -0.14 0.9 0.3 -1.35 -1.45 -1.97 -1.02
- -3.35 1.7 1.8 0.22 0.31 -0.56 -1.44 -0.15 1.22 -0.26 0.72 - - - -
-1.05 -2.5 0.76 1.16 0.39 0.68 -0.18 -0.24 0.2 0.15 0.54 -0.05 -0.48 -1.05 -1.66 -0.79
-1.19 -1.33 0.68 0.65 0.36 0.34 0.91 -1.05 -0.29 0.1 0.61 0.32 -0.44 -1.04 -1.42 -0.3
-0.38 -0.49 0.69 1.05 0.48 0.08 0.28 -1.23 -0.02 -0.06 0.58 0.52 -1.17 -0.95 -1.54 -0.85
0.2 -2.05 0.7 0.81 0.95 0.59 0.4 -1.77 -0.53 0.64 0.18 -0.14 -1.0 -1.48 -1.11 -0.82
-0.77 -1.68 0.65 1.31 1.01 0.75 -0.44 -1.02 0.39 0.5 0.76 0.12 -2.16 -2.69 -3.64 -2.54
-0.95 -1.8 0.88 1.05 0.55 0.69 -0.9 -1.48 -0.48 -0.26 0.26 0.16 -0.23 -0.35 -0.52 0.16
- 0.92 0.95 2.17 - -1.9 -1.53 - 1.03 1.09 -1.19 1.29 - - - -
-0.1 -2.63 1.54 1.72 0.7 1.03 -1.57 -1.64 0.36 -0.95 0.05 -0.12 -2.24 -2.88 -3.45 -2.34
-0.7 -1.37 0.83 1.01 0.31 0.29 -0.15 -1.13 -0.4 -0.44 0.45 0.13 0.11 -0.54 -0.64 0.04
-2.82 -2.7 0.94 1.22 -0.86 -0.23 -0.3 -1.03 -1.5 -0.14 -0.02 0.34 0.51 0.22 -0.13 0.8
-0.57 -0.2 0.36 0.96 0.12 -0.3 -0.37 -0.74 0.24 0.28 0.1 -0.11 0.02 -0.14 -0.36 -0.21
-0.1 -1.11 0.64 0.83 0.61 0.36 0.16 -0.59 -0.16 0.19 0.41 0.26 -0.64 -1.22 -1.03 -0.85
-0.28 -0.12 0.43 0.77 0.59 0.16 0.47 -0.17 0.34 0.15 0.53 0.44 -1.73 -2.23 -1.79 -1.55
-0.57 -2.03 0.34 0.55 0.33 0.19 -0.04 -0.36 -0.24 -0.02 0.31 -0.37 0.52 -0.01 -0.56 0.33
-0.54 -1.46 0.4 0.86 0.55 0.42 0.38 -0.24 0.24 0.5 0.75 0.25 -1.23 -1.71 -2.07 -1.21
-0.55 -0.8 0.67 1.13 0.55 0.38 -0.24 -0.52 -0.16 -0.05 0.59 0.27 -0.59 -1.24 -1.65 -0.58
-0.63 -0.67 0.33 0.72 0.32 0.37 0.06 -1.06 0.02 0.11 0.37 0.21 -0.09 -0.57 -0.39 -0.24
-8.51 -4.96 1.56 1.07 0.56 -0.45 1.86 -1.29 -7.16 -7.61 1.47 0.92 - - - -
-0.97 -0.26 0.86 1.18 0.12 0.58 0.02 -0.16 -0.06 0.16 0.41 0.43 -1.88 -1.25 -2.03 -1.33
-0.6 -0.96 0.7 0.91 0.3 0.78 -0.56 -1.04 0.37 0.24 0.7 0.57 -1.03 -1.55 -1.83 -0.95
-0.5 -1.37 0.97 1.25 0.49 0.74 0.34 -0.83 -0.37 -0.27 0.84 0.18 -1.68 -2.07 -1.97 -1.64
-0.1 -1.7 0.56 0.81 0.16 0.3 0.37 -0.6 -0.31 0.02 0.79 0.1 -0.16 -0.98 -2.01 -0.02
-2.65 -6.39 1.66 0.67 0.25 -0.44 1.43 -1.94 -0.82 -0.31 1.56 0.01 -5.97 -4.26 -0.47 -3.51
-0.78 -3.58 0.69 1.32 0.86 0.21 0.56 -2.3 -1.97 -0.47 0.92 0.66 -0.96 -1.44 -1.24 -0.29
-6.85 -5.27 0.47 0.72 0.58 0.33 -3.28 -3.96 -0.82 -0.96 0.25 -1.58 -1.1 -2.1 2.7 -2.27
-0.1 -0.87 0.63 0.82 0.7 0.43 0.02 -0.87 -0.19 -0.01 0.57 -0.03 -0.52 -1.21 -1.55 -0.22
-0.05 -0.56 0.86 0.97 0.47 0.69 -1.06 -1.35 0.18 0.51 0.48 0.4 -1.39 -1.8 -2.36 -0.76
-0.59 -2.78 1.24 1.38 0.41 1.23 -0.25 -0.37 -0.27 -0.56 0.15 0.1 -1.9 -1.54 -1.81 -1.56
-1.05 -1.94 0.69 1.14 -0.13 -0.27 -1.37 -2.28 -0.33 0.23 0.29 0.39 0.23 0.3 0.13 0.15
-1.02 -1.06 1.42 1.73 -0.34 0.17 -1.35 -1.67 0.35 0.61 0.59 0.53 -2.47 -2.61 -3.14 -2.19
-0.72 -1.38 1.1 1.47 0.72 0.78 -0.79 -1.18 -0.18 -0.08 0.52 0.34 -1.45 -1.96 -2.41 -1.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.