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Heatmap: Cluster_352 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - -1.59 - - - - - - 2.36 -0.73 2.92 1.24
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 0.91 - - - - - - - - 3.82 -
- - - - - 4.0 - - - - - - - - - -
- - - - - 0.2 - - - - - - - 1.05 3.12 2.02
- - - - - 2.51 - - - - - - - 3.36 - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 1.15 - - - - - - - 1.41 3.48 -
- - - - - 0.91 - - - - - - - - 3.82 -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - -0.64 - - - - - - 1.81 2.3 2.79 -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 4.0 - - - - - - - - - -
- - - - - -0.87 - - - - - - 2.95 0.01 - 2.75
- - - - - -0.01 - - - - - - - - 3.91 -
- - - - - 2.52 - - - - - - - 3.36 - -
- - - - - 4.0 - - - - - - - - - -
- - - - - 1.34 - - - - - - - - - 3.75
- - - - - 4.0 - - - - - - - - - -
- - - - - 3.31 - - - - - - - 2.6 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.