Heatmap: Cluster_67 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- 3.79 - - - -5.5 -6.13 0.43 -3.89 - - - -3.55 -3.63 -0.99 -3.67
-3.86 3.78 -7.64 -6.14 -4.16 -4.87 -2.56 0.61 -6.74 -7.0 -4.44 -5.17 -2.82 -3.13 -6.76 -3.95
-0.17 2.7 -4.98 -4.32 -1.84 -4.72 -4.45 0.59 -6.22 -4.57 -2.48 -1.71 0.3 0.72 0.66 0.74
-4.28 3.88 -10.0 -8.99 - -7.23 -8.41 0.32 - - - - - - -9.44 -
- 2.13 - - - - - -0.71 - - - - - - 3.46 -
-3.61 3.59 -5.7 -5.04 -2.57 -3.56 -6.79 1.22 -1.05 -0.99 - - -4.2 -3.42 -3.81 -3.91
-2.18 3.25 -7.2 - - - -5.06 0.26 -5.04 -3.24 - -6.63 0.88 -0.53 -1.99 1.08
-2.06 3.57 -1.55 -0.63 -3.43 -2.58 - 0.6 - - - - - -1.15 -0.67 -
-0.51 3.72 - - - - - 1.11 - - - - - - - -
-3.91 3.47 -6.2 - -4.6 -4.09 -4.88 1.45 -0.77 -1.4 -7.83 -6.35 -2.37 -0.65 -5.64 -3.04
-4.0 3.4 - - - - -2.84 0.28 - - - -1.59 -1.26 -2.35 - 1.62
-0.4 2.03 -2.12 -2.89 -1.57 -0.85 -1.65 -1.7 -0.81 -0.69 -1.55 -1.88 0.69 0.96 1.25 0.62
- 2.28 - - - - - 0.4 -0.96 - - - -0.0 -2.09 1.09 2.58
-0.56 3.72 - - -5.28 -3.54 -2.8 0.07 - - - - -2.76 -3.37 -2.1 -1.4
- 3.54 -2.5 -0.85 -1.37 -1.95 - 1.23 -1.34 -1.87 - - - - - -
-1.77 3.2 -2.84 -2.58 -1.41 -1.03 0.37 0.74 -3.14 -2.58 -2.73 -1.35 -0.93 -2.09 -2.09 -0.81
-5.36 3.21 -2.34 -1.47 -3.38 -0.63 -1.27 1.22 -4.91 - -0.82 -1.75 -2.6 -1.89 -0.04 -1.4
-0.23 2.51 -5.98 -3.65 -2.15 -3.43 -2.65 -0.82 -1.6 -0.95 -5.31 -3.42 1.18 0.48 0.08 1.39
-2.1 3.38 - - - - - 1.77 -1.24 - - - - - 0.05 -1.05
-1.3 2.75 -3.61 -4.12 -3.48 -2.23 -1.09 0.59 -1.95 -3.82 -1.72 -1.04 -0.01 0.4 0.75 0.4
-0.5 2.25 - - - -2.31 -2.96 -0.95 -1.7 -1.64 - - 2.45 -0.46 - 1.53
-5.14 3.71 -3.05 - -3.65 - -4.46 0.28 -4.81 -3.75 -4.71 -3.82 -1.45 -1.55 -1.48 -2.58
-3.44 2.85 - - -3.53 - -2.33 0.91 - - -1.0 -3.11 0.57 0.16 -0.77 1.45
-0.89 3.67 -4.81 -3.16 - -6.85 -3.44 0.19 -2.71 -6.17 -5.55 -5.24 -1.81 -1.61 -1.93 -2.12
-2.15 0.26 -4.68 - -3.97 -5.13 -3.55 -2.78 - - - -6.12 2.01 1.09 1.37 2.45
-6.14 3.77 -3.98 - -2.86 -3.17 -0.98 0.24 -2.72 -3.07 -5.62 -5.73 - - - -
0.83 3.22 -3.15 - -2.02 -1.61 -0.36 0.35 -1.59 - -3.5 -3.6 -0.65 -2.33 -0.26 -
- 3.84 - - - - - 0.73 - - - - - - - -
-1.86 3.69 - - - -6.36 -6.42 1.47 - - - - - - - -
-0.03 2.67 -4.59 -4.25 - - -1.62 0.0 -1.17 - -3.88 -2.99 0.7 0.86 0.0 1.1
0.17 3.22 -6.2 -5.87 -4.07 -3.92 -0.05 -0.12 -4.64 - -4.54 -5.65 0.92 -0.68 -2.31 -0.51
-3.75 3.71 - - - - - 0.74 - - - - - -2.15 -0.08 -
- 3.0 - - - - - 1.31 - - - - - - - 2.46
0.38 3.56 - - - - - 1.18 - - -0.75 - - - - -
0.1 3.31 -5.27 -6.58 -4.64 -4.81 -7.35 0.84 -1.58 -2.12 -5.17 -4.8 -0.86 -0.71 -1.28 -0.18
-4.54 3.78 -4.26 -6.52 -4.13 -5.12 -2.41 0.42 -7.03 - -6.19 -6.3 -3.55 -4.45 -3.47 -2.03
-1.09 3.62 - - -2.71 - - -0.3 - - -2.16 - - - 1.05 -
0.41 3.23 -10.2 -12.19 -8.4 -7.97 -7.7 1.57 -0.19 -0.44 -9.26 -5.26 -2.22 -1.76 -6.32 -2.94
-5.26 3.38 -3.1 -5.09 -1.13 -1.76 -0.12 0.46 - -4.78 -1.75 0.43 -2.52 -2.61 -2.54 -2.64
-3.86 0.8 - - - - -3.11 -3.52 -3.43 - - -3.45 3.02 1.04 -0.14 1.46
- 3.69 - - - - - 1.63 - - - - - - - -
-3.28 3.7 - - - - -0.86 0.04 -0.81 -0.76 - -2.41 - - - -
-1.19 3.47 -6.78 -4.12 -1.95 -1.38 0.17 1.1 -4.2 - -2.78 -2.3 - - - -3.4
-1.72 3.68 - - - -3.06 -0.28 0.97 - - - - - - - -
-0.34 3.68 - - - -5.24 - -0.08 - - - - -1.73 -2.83 - 0.02
- 3.83 - - - - - 0.79 - - - - - - - -
-0.81 2.53 -3.45 - - -5.07 -3.38 0.7 - - -3.37 -4.47 0.47 -0.21 -2.14 2.38
0.65 3.3 -2.75 -1.4 -2.54 -0.99 -1.69 0.89 -4.26 -1.71 -4.05 -4.08 -2.06 -2.88 -3.56 -2.03
-4.51 3.07 -1.99 -1.73 -1.53 -0.77 0.23 1.21 -1.37 -0.47 -1.95 -1.61 -3.51 -4.28 -1.72 -1.24
-2.32 2.14 -5.42 - -5.29 -2.87 -2.19 0.57 -3.85 -3.2 - - 1.78 1.12 -2.53 1.83
- 3.41 - - -5.37 - -5.16 1.71 -1.3 -0.19 -1.98 -2.31 -3.59 -4.68 - -2.12
-1.88 3.57 -7.16 -6.99 -6.97 -6.46 -2.22 1.56 -1.79 -3.33 -3.84 -5.71 -4.47 -4.32 -7.38 -3.24
-7.38 3.85 - - - -11.24 -8.18 0.6 - -11.57 - - -5.54 -6.11 -6.0 -5.51
-4.49 3.79 - -3.38 -1.26 - -4.38 0.1 - - - -2.16 - - -1.77 -
0.25 2.36 -1.72 -0.23 -0.66 -1.84 -1.04 -0.03 -1.36 -1.0 -0.6 -1.41 0.21 0.17 -0.95 0.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.