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Heatmap: Cluster_178 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.44 -0.03 -1.1 -1.1 -0.77 -0.91 0.47 -0.42 1.15 0.82 0.02 -0.72 0.66 -0.15 -0.88 0.57
-3.41 -1.36 -1.61 -0.27 -1.89 -1.06 0.76 0.5 1.67 2.2 -2.94 -3.04 -0.7 0.02 - -0.23
-1.43 -0.65 -0.6 -1.41 -1.51 -1.53 1.03 -0.48 1.91 0.45 0.59 -1.23 0.28 -0.5 -1.38 0.19
-1.69 -0.3 -1.86 -1.74 -2.51 -2.06 0.79 1.3 1.98 0.38 -0.02 -0.46 -0.14 -0.8 -2.75 0.15
-0.42 -0.65 -0.82 -0.68 -0.14 -0.52 0.46 -0.37 1.85 0.57 0.2 -1.12 -0.36 -1.01 -2.85 0.64
-1.82 -2.93 -1.39 -1.02 -1.05 -1.8 0.62 0.14 1.21 0.47 -0.03 -1.3 1.38 -0.34 -0.69 1.15
- - -0.42 0.15 -1.23 -0.91 1.58 -1.72 2.16 1.89 -0.21 -0.25 - - - -
-0.06 -3.96 -1.65 -1.43 0.02 -0.01 0.47 0.39 2.46 0.97 0.48 -0.47 -5.86 -7.95 - -
-4.65 -2.4 -2.29 -1.48 -2.74 -2.33 1.8 -0.6 2.48 1.85 -0.63 -1.06 -1.96 -3.79 - -3.41
-1.34 - - - - - 1.7 1.32 2.12 1.29 -2.49 - 0.77 0.26 - -
- -0.16 -3.08 -0.75 -1.37 - 1.0 -0.06 2.01 0.87 -0.42 - 0.83 -0.68 - 1.03
-1.45 -0.45 -1.16 -0.27 -1.2 -0.14 0.04 -0.46 1.6 0.56 0.46 -0.89 0.05 -0.91 -0.93 1.01
-0.55 -0.57 -1.52 -1.82 -0.92 -1.24 0.13 0.02 1.55 0.29 -0.24 -2.27 1.07 0.1 -0.41 0.87
- - - - - - 1.42 1.68 2.52 2.13 - - - - - -
-0.34 -0.24 -1.01 -0.94 -0.84 -1.13 0.76 0.87 2.22 1.6 -1.53 -1.38 -3.21 -3.36 -3.63 -3.4
-0.38 -0.36 -1.79 -1.54 -1.09 -1.35 0.76 0.18 1.21 0.21 0.45 -1.26 0.59 0.02 -0.69 0.8
-3.24 -1.65 -3.15 -1.74 - - -0.04 0.03 2.28 -0.41 -2.64 -1.18 2.25 -1.17 - 0.81
0.62 0.53 -1.37 -1.36 -1.73 -0.44 -0.74 0.12 1.89 0.66 -0.9 -0.05 -0.46 -0.73 -1.14 -0.1
-1.53 -1.2 -3.89 -4.11 -4.05 -1.39 -0.09 0.77 2.27 1.56 0.82 -0.54 -0.76 -1.28 -3.14 -0.58
0.0 -0.33 -2.3 -1.66 -1.41 -1.57 0.75 1.05 1.63 1.04 -0.43 -2.04 -0.18 -1.0 -1.93 0.52
-1.79 -1.48 -3.63 -3.37 -1.92 -2.14 -0.0 0.04 2.02 0.57 0.06 -1.09 0.96 0.14 -0.1 0.69
-0.74 -1.16 -0.62 -1.19 -1.92 -1.18 0.85 -0.07 0.85 -0.31 -1.21 -2.44 0.81 0.14 -0.42 1.83
- - -1.85 -3.1 -2.31 -1.88 0.98 0.66 2.51 1.96 - -0.86 -1.53 -1.04 - -0.65
-1.48 -0.48 -1.67 -1.19 -2.31 -2.14 -0.13 0.36 2.01 1.17 0.32 -1.47 0.37 -2.11 -1.04 0.71
- - -4.95 -2.29 - - 0.55 -1.53 3.17 1.66 0.36 -0.93 - - - -
-1.1 -2.39 -1.54 -0.75 -1.06 -0.71 -0.07 0.34 1.05 1.44 -0.75 -1.67 0.56 0.35 0.26 0.54
-2.71 -2.13 -2.56 -2.85 -3.13 -2.46 1.44 -0.08 2.09 2.42 -0.42 -1.28 -3.21 -3.64 -2.05 -2.57
-4.37 -0.86 -2.43 -1.69 -1.9 -1.19 0.47 0.48 2.32 1.73 0.94 -0.15 -3.66 - -4.27 -2.78
-1.93 -2.97 -0.59 -0.19 -5.65 -6.02 0.65 1.68 2.03 0.73 0.57 -0.15 -1.21 -2.12 -2.39 -1.77
- - -3.83 -4.49 -4.28 -4.12 1.23 1.82 2.73 1.67 -3.74 -4.85 - - - -
-1.08 -1.05 -2.44 -2.44 -0.98 -1.61 0.97 0.53 1.26 0.31 0.2 -1.34 0.84 -0.09 -0.73 0.95
-0.19 -0.09 -0.89 -0.49 -0.93 -1.44 0.4 0.25 0.85 0.37 -0.1 -0.61 0.66 -0.03 -0.56 0.69
-3.46 -0.82 -2.07 -2.91 -3.53 -3.28 0.04 -0.65 2.59 0.85 0.62 -1.15 -0.16 -0.67 -0.54 0.13
-1.31 -1.19 -1.66 -1.37 -1.89 -1.75 0.55 -1.18 1.78 0.67 -0.16 -1.3 0.63 0.53 0.03 0.72
-1.08 -1.49 -1.49 -1.8 -1.68 -2.26 0.41 -0.01 2.2 1.36 0.71 -0.92 -0.32 -1.51 -0.93 -0.54
-1.71 -1.83 -1.98 -1.6 -1.2 -1.17 0.9 -0.21 2.45 1.14 -0.11 -0.14 -0.8 -1.43 -2.23 -0.84
-2.24 -2.51 -1.79 -1.88 -2.01 -1.16 -0.14 0.77 1.18 0.02 -0.3 -1.78 1.54 0.58 -0.45 1.16
-0.66 -0.78 -0.98 -0.38 -0.58 -0.87 0.16 0.16 1.77 1.15 0.51 -0.11 -0.66 -1.39 -1.54 -0.46
-1.58 -1.01 -0.93 -2.25 -0.68 -0.87 1.3 0.13 1.93 2.06 -1.52 -1.01 -1.66 -1.99 -5.65 -1.72
-1.28 -4.12 -2.24 -2.11 -4.43 - 0.54 -0.21 2.2 1.66 0.36 -0.17 -0.43 -0.92 -3.25 0.5
-1.23 1.0 -1.48 -1.05 -0.25 -0.94 -1.09 -0.97 2.35 1.54 0.38 -1.86 -2.02 -1.9 -2.64 -2.75
-4.97 -2.42 -2.36 -2.73 -1.01 -1.66 0.77 -0.33 1.75 1.13 0.53 -1.04 0.64 -0.61 -1.42 1.03
-1.46 -0.18 -3.72 -3.87 -4.65 -3.28 -0.05 1.33 2.69 0.16 -0.23 -1.2 -0.46 -1.43 -1.84 -0.38
-1.48 -0.42 -0.87 -0.62 -0.6 -0.21 0.83 -1.78 1.83 2.04 0.02 0.06 -2.9 -3.76 -3.28 -4.09
0.14 0.03 -1.85 -1.48 -2.11 -1.84 0.12 -0.19 1.48 0.33 -0.65 -0.62 0.54 0.54 0.1 0.54
- -6.25 -4.46 -4.55 -3.67 -5.77 -0.13 -0.3 1.78 0.17 -1.63 -2.97 1.56 1.34 -0.64 1.56
-1.91 -1.18 -1.55 -1.46 -0.7 -1.11 0.63 0.01 1.61 1.14 0.31 -1.1 0.58 -0.6 -1.72 0.62
-0.6 -0.68 -1.65 -1.37 -4.05 -2.2 0.61 -0.29 1.35 0.34 -1.57 -1.27 1.16 0.66 0.52 0.65
-0.72 -1.68 -3.05 -2.72 -3.28 -2.33 0.88 1.49 2.69 0.47 -0.74 -2.13 -1.77 -1.84 -2.86 -1.04
-1.42 -1.98 -6.43 -3.52 - -2.77 -0.79 0.19 2.32 -0.35 -5.77 -3.56 1.61 0.77 -2.55 1.37
-2.14 -2.93 -4.99 -2.83 -4.04 -3.36 -1.36 -1.97 -0.44 -1.39 -1.88 -2.12 1.98 1.97 0.93 1.71
-0.58 -0.37 -1.52 -1.4 -0.66 -0.97 0.78 0.08 1.67 0.94 -0.32 -1.51 0.18 -0.38 -1.17 0.41
-0.26 -0.96 -0.68 -0.54 -1.05 -0.99 0.27 -0.11 0.93 0.27 0.12 -0.24 0.61 0.22 -0.13 0.64
-2.05 - -1.08 -0.66 - - -0.8 -0.23 1.67 -0.16 - - 0.7 2.19 - 1.57
-3.75 -2.18 -0.57 0.2 -0.52 -0.2 1.18 -0.88 1.83 1.81 0.31 -0.7 -2.12 -3.0 -3.96 -2.52
- - -0.98 0.17 -1.86 -2.0 0.6 -0.3 2.44 1.59 0.89 -0.38 - - - -1.12
-1.55 0.81 - - - - - - 3.17 1.86 0.31 - - - - -
-0.68 -0.19 -0.94 -1.23 -1.23 -1.11 0.91 0.04 0.98 -0.01 -0.37 -1.91 0.95 0.29 -0.14 0.75
-2.64 0.85 - - - - - -1.6 3.23 1.33 0.85 - - - - -
-0.65 -3.11 -3.14 -1.77 -0.89 -0.81 0.57 -0.24 1.77 0.84 0.16 -1.08 0.91 -0.77 -0.7 0.61
-0.87 -0.37 -2.49 -2.07 -1.34 -1.3 0.31 1.41 2.05 1.16 -0.32 -1.05 -0.79 -1.63 -1.63 -0.55
- - -5.87 -4.8 -1.9 -2.49 1.31 -0.64 2.67 2.09 -0.21 -0.48 -4.54 - - -2.66
-1.56 -0.87 -2.84 -2.84 -1.72 -1.87 -0.6 -1.06 1.49 0.23 0.4 -1.4 1.25 0.37 -0.45 1.59
-0.93 -1.05 -1.42 -1.1 -2.85 -2.87 0.21 -0.01 1.97 0.73 0.31 -1.06 0.46 -0.01 -1.05 0.65
-1.77 -0.97 - - -2.53 -4.13 0.46 -0.15 0.76 0.38 -2.69 -2.23 0.92 1.26 0.09 1.99
- 0.76 -4.57 - -3.22 - -5.82 -4.91 2.9 1.64 1.36 -0.19 - - -3.3 -
-1.84 0.23 -3.34 -2.8 -3.11 -3.61 0.3 -1.23 1.91 1.03 0.16 -1.38 0.89 -0.87 -0.57 1.05
-0.83 -0.6 -0.64 -0.22 -0.4 -0.78 1.27 0.2 1.45 0.43 0.14 -1.48 0.0 -1.0 -3.36 0.3
-3.51 -1.87 -3.17 -2.5 - -2.19 -1.53 0.1 2.53 1.69 0.54 -1.0 -0.1 -0.46 -0.71 -1.07
-4.9 -3.39 -0.25 0.43 -0.33 0.09 0.95 -1.12 2.04 1.69 -0.57 -0.75 -1.41 -5.21 -4.24 -1.44
-0.07 -1.59 -1.28 -0.67 -1.39 -1.24 0.96 -0.78 1.99 0.7 0.82 0.33 -1.22 -1.6 -1.55 -0.72
-0.37 -1.0 -0.33 -0.1 -0.38 -0.56 -0.02 -0.3 0.65 0.85 0.14 -0.83 0.68 -0.3 -0.44 0.64
-0.34 -0.61 -2.01 -2.08 -1.38 -2.37 0.31 -0.19 1.41 0.32 0.22 -1.09 0.75 0.53 -1.72 1.27
0.09 0.2 -1.82 -3.26 -1.1 -2.88 0.46 0.12 1.58 0.97 0.78 -0.49 -2.25 -0.55 -0.36 0.36
-0.21 - -1.5 - -1.79 - 0.14 1.03 3.12 0.84 -1.24 -1.93 - -2.69 - -
- -3.58 - - - - 0.74 0.98 3.13 1.25 -2.3 - - - -0.1 -
- - - - - 0.36 0.71 1.61 2.99 1.05 - - - - - -
-0.81 - - - - - 1.61 1.26 2.93 1.24 - - - - - -
-0.22 -0.62 -1.84 -0.71 -0.75 -1.07 -0.04 -1.71 1.67 1.07 0.48 -1.33 0.54 -0.8 -0.98 0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.