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Heatmap: Cluster_178 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
6.21 8.25 3.93 3.92 4.95 4.48 11.67 6.29 18.69 14.88 8.54 5.12 13.31 7.6 4.58 12.52
0.04 0.18 0.15 0.38 0.12 0.22 0.78 0.65 1.46 2.11 0.06 0.06 0.28 0.47 0.0 0.39
0.73 1.26 1.3 0.74 0.69 0.68 4.01 1.42 7.4 2.7 2.97 0.84 2.39 1.4 0.76 2.26
2.39 6.27 2.13 2.32 1.36 1.85 13.39 19.05 30.43 10.05 7.64 5.62 6.99 4.43 1.15 8.56
4.09 3.49 3.11 3.42 4.97 3.82 7.55 4.24 19.65 8.09 6.28 2.52 4.25 2.71 0.76 8.52
5.17 2.39 6.94 9.0 8.8 5.25 27.92 20.05 42.16 25.2 17.87 7.42 47.38 14.36 11.29 40.45
0.0 0.0 4.91 7.31 2.8 3.49 19.69 2.0 29.37 24.36 5.69 5.53 0.0 0.0 0.0 0.0
34.34 2.3 11.4 13.3 36.29 35.69 49.8 47.06 196.99 70.35 50.06 25.93 0.62 0.14 0.0 0.0
0.07 0.32 0.34 0.61 0.25 0.34 5.85 1.11 9.4 6.05 1.09 0.81 0.43 0.12 0.0 0.16
0.09 0.0 0.0 0.0 0.0 0.0 0.74 0.57 0.99 0.55 0.04 0.0 0.39 0.27 0.0 0.0
0.0 0.21 0.03 0.14 0.09 0.0 0.48 0.23 0.96 0.43 0.18 0.0 0.42 0.15 0.0 0.49
1.74 3.49 2.13 3.94 2.08 4.31 4.9 3.46 14.4 7.01 6.56 2.56 4.92 2.54 2.5 9.62
5.82 5.72 2.96 2.42 4.49 3.61 9.32 8.6 24.91 10.38 7.21 1.76 17.83 9.15 6.4 15.58
0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.1 0.18 0.13 0.0 0.0 0.0 0.0 0.0 0.0
53.78 57.74 34.02 35.7 38.03 31.13 115.56 124.69 319.0 206.85 23.72 26.27 7.4 6.67 5.53 6.45
19.72 20.01 7.45 8.86 12.09 10.09 43.65 29.23 59.45 29.72 35.26 10.74 38.61 26.15 15.94 44.84
0.61 1.83 0.65 1.72 0.0 0.0 5.59 5.88 27.92 4.34 0.92 2.54 27.42 2.57 0.0 10.12
42.73 40.35 10.78 10.83 8.4 20.58 16.71 30.38 103.51 44.13 14.97 26.97 20.19 16.82 12.61 25.93
3.63 4.58 0.71 0.61 0.64 4.01 9.87 17.95 50.78 31.09 18.62 7.26 6.21 4.33 1.2 7.04
11.96 9.51 2.43 3.78 4.49 4.02 20.06 24.8 36.99 24.62 8.85 2.91 10.51 5.99 3.14 17.1
6.07 7.49 1.7 2.03 5.52 4.77 20.91 21.58 84.99 31.15 21.86 9.86 40.8 23.08 19.52 33.85
2.62 1.95 2.84 1.92 1.15 1.93 7.86 4.17 7.87 3.52 1.88 0.81 7.64 4.82 3.27 15.56
0.0 0.0 0.16 0.07 0.12 0.16 1.16 0.92 3.34 2.29 0.0 0.32 0.2 0.29 0.0 0.37
9.06 18.15 7.97 11.09 5.11 5.75 23.09 32.58 101.93 57.05 31.52 9.12 32.64 5.88 12.34 41.49
0.0 0.0 0.03 0.2 0.0 0.0 1.46 0.34 8.95 3.16 1.28 0.53 0.0 0.0 0.0 0.0
3.19 1.3 2.36 4.06 3.29 4.19 6.53 8.67 14.14 18.62 4.06 2.15 10.1 8.73 8.2 9.97
9.59 14.4 10.69 8.69 7.16 11.43 171.0 59.6 267.01 335.5 47.1 25.84 6.81 5.05 15.17 10.58
0.24 2.71 0.91 1.52 1.32 2.16 6.84 6.87 24.65 16.41 9.45 4.44 0.39 0.0 0.26 0.72
8.08 3.93 20.51 27.07 0.61 0.48 48.29 98.58 125.46 50.95 45.61 27.69 13.33 7.1 5.86 9.01
0.0 0.0 0.21 0.13 0.16 0.17 7.13 10.69 20.04 9.61 0.23 0.11 0.0 0.0 0.0 0.0
6.19 6.33 2.4 2.42 6.63 4.28 25.55 18.85 31.39 16.2 15.02 5.18 23.38 12.32 7.91 25.25
28.47 30.7 17.52 23.21 17.06 11.98 42.95 38.83 58.87 42.22 30.38 21.28 51.4 31.8 22.08 52.48
0.26 1.63 0.69 0.38 0.25 0.3 2.97 1.83 17.38 5.21 4.43 1.3 2.58 1.81 1.98 3.16
5.25 5.72 4.14 5.04 3.51 3.89 19.05 5.76 44.81 20.72 11.71 5.29 20.27 18.81 13.35 21.49
1.3 0.98 0.98 0.79 0.86 0.57 3.67 2.74 12.62 7.06 4.49 1.45 2.21 0.97 1.45 1.89
10.68 9.86 8.84 11.58 15.27 15.54 65.31 30.31 191.03 77.32 32.48 31.76 20.06 13.0 7.47 19.5
2.47 2.05 3.38 3.16 2.89 5.23 10.63 19.88 26.36 11.86 9.46 3.39 33.93 17.48 8.57 26.0
35.42 32.54 28.32 43.18 37.45 30.67 62.52 62.59 191.29 123.88 79.62 51.73 35.47 21.43 19.28 40.82
8.86 13.18 13.95 5.6 16.56 14.56 65.3 29.16 101.11 110.64 9.26 13.16 8.43 6.68 0.53 8.07
1.08 0.15 0.55 0.6 0.12 0.0 3.79 2.26 12.0 8.24 3.35 2.33 1.93 1.38 0.27 3.7
1.38 6.45 1.15 1.56 2.71 1.67 1.51 1.64 16.35 9.34 4.18 0.89 0.79 0.87 0.52 0.48
0.32 1.89 1.97 1.52 5.02 3.2 17.22 8.04 34.08 22.12 14.63 4.92 15.7 6.62 3.78 20.58
6.49 15.78 1.36 1.22 0.71 1.84 17.23 44.77 114.92 19.99 15.26 7.79 13.02 6.62 5.0 13.73
6.88 14.35 10.56 12.57 12.74 16.62 34.32 5.61 68.51 79.28 19.57 20.04 2.58 1.42 1.99 1.13
68.35 63.24 17.17 22.23 14.38 17.27 67.5 54.28 173.41 77.97 39.45 40.25 90.28 89.9 66.54 89.95
0.0 0.08 0.27 0.25 0.47 0.11 5.4 4.81 20.34 6.67 1.91 0.76 17.52 15.07 3.82 17.43
3.14 5.19 4.03 4.29 7.26 5.44 18.21 11.89 36.01 25.89 14.55 5.5 17.61 7.77 3.57 18.04
3.39 3.2 1.64 1.98 0.31 1.12 7.84 4.19 13.11 6.5 1.72 2.14 11.46 8.1 7.33 8.07
5.26 2.69 1.04 1.31 0.89 1.71 15.91 24.26 55.72 11.95 5.18 1.98 2.53 2.41 1.19 4.2
0.97 0.66 0.03 0.23 0.0 0.38 1.51 2.96 12.99 2.04 0.05 0.22 7.9 4.44 0.44 6.74
28.52 16.53 3.94 17.65 7.62 12.27 48.99 31.98 92.86 47.89 34.11 28.95 497.07 492.07 240.04 410.94
22.9 26.43 11.92 12.94 21.65 17.49 58.69 36.26 108.55 65.54 27.31 11.97 38.68 26.21 15.19 45.43
6.32 3.89 4.7 5.18 3.66 3.8 9.1 6.97 14.41 9.11 8.22 6.38 11.54 8.81 6.89 11.8
1.22 0.0 2.39 3.19 0.0 0.0 2.9 4.32 16.13 4.53 0.0 0.0 8.18 22.99 0.0 15.0
3.18 9.41 28.77 49.1 29.82 37.19 97.03 23.18 151.52 150.13 53.15 26.31 9.82 5.35 2.75 7.45
0.0 0.0 0.32 0.71 0.17 0.16 0.95 0.51 3.39 1.89 1.16 0.48 0.0 0.0 0.0 0.29
0.05 0.25 0.0 0.0 0.0 0.0 0.0 0.0 1.29 0.52 0.18 0.0 0.0 0.0 0.0 0.0
12.48 17.43 10.41 8.52 8.52 9.27 37.44 20.46 39.46 19.83 15.48 5.3 38.48 24.45 18.13 33.55
0.36 4.01 0.0 0.0 0.0 0.0 0.0 0.73 20.89 5.61 4.0 0.0 0.0 0.0 0.0 0.0
5.23 0.95 0.93 2.4 4.43 4.68 12.17 6.94 28.04 14.64 9.17 3.88 15.38 4.8 5.04 12.55
11.77 16.65 3.85 5.14 8.5 8.76 26.76 57.15 89.36 48.27 17.22 10.43 12.49 6.97 6.98 14.72
0.0 0.0 0.12 0.26 1.93 1.28 17.73 4.62 45.56 30.46 6.2 5.16 0.31 0.0 0.0 1.13
7.2 11.63 2.97 2.96 6.46 5.82 14.05 10.2 59.68 24.98 27.94 8.05 50.64 27.45 15.56 64.1
3.8 3.5 2.71 3.37 1.0 0.99 8.4 7.22 28.48 12.02 9.02 3.49 9.97 7.22 3.51 11.36
4.16 7.27 0.0 0.0 2.47 0.81 19.58 12.83 24.12 18.57 2.2 3.02 26.9 34.16 15.11 56.43
0.0 5.19 0.13 0.0 0.33 0.0 0.05 0.1 22.84 9.52 7.86 2.68 0.0 0.0 0.31 0.0
1.76 7.44 0.62 0.91 0.73 0.52 7.81 2.7 23.75 12.97 7.07 2.43 11.74 3.46 4.26 13.1
8.86 10.4 10.14 13.52 11.99 9.16 38.06 18.12 43.18 21.27 17.42 5.66 15.79 7.9 1.54 19.37
0.32 1.0 0.41 0.64 0.0 0.8 1.27 3.92 21.17 11.8 5.31 1.83 3.41 2.66 2.23 1.74
0.07 0.2 1.81 2.88 1.7 2.28 4.14 0.98 8.85 6.93 1.44 1.27 0.81 0.06 0.11 0.79
20.21 7.04 8.75 13.31 8.11 8.98 41.15 12.33 84.48 34.46 37.53 26.62 9.12 7.0 7.25 12.88
9.28 6.01 9.6 11.26 9.27 8.17 11.86 9.74 18.85 21.73 13.28 6.76 19.32 9.74 8.86 18.72
13.72 11.35 4.31 4.1 6.68 3.36 21.48 15.25 45.94 21.61 20.15 8.16 29.22 24.99 5.28 41.93
0.88 0.95 0.23 0.09 0.38 0.11 1.13 0.9 2.46 1.61 1.41 0.59 0.17 0.56 0.64 1.05
0.49 0.0 0.2 0.0 0.16 0.0 0.63 1.16 4.95 1.01 0.24 0.15 0.0 0.09 0.0 0.0
0.0 0.04 0.0 0.0 0.0 0.0 0.74 0.87 3.87 1.05 0.09 0.0 0.0 0.0 0.41 0.0
0.0 0.0 0.0 0.0 0.0 0.08 0.1 0.2 0.51 0.13 0.0 0.0 0.0 0.0 0.0 0.0
1.59 0.0 0.0 0.0 0.0 0.0 8.53 6.66 21.19 6.56 0.0 0.0 0.0 0.0 0.0 0.0
23.56 17.79 7.68 16.76 16.28 13.07 26.65 8.38 87.07 57.34 38.22 10.92 39.71 15.69 13.88 45.36

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)