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Heatmap: Cluster_280 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.71 -0.49 -1.51 0.08 -0.9 -1.54 0.42 -0.66 -3.52 -2.05 0.82 0.09 1.09 1.14 0.21 0.81
-1.22 -0.92 0.09 0.88 -0.4 -0.02 0.4 -1.8 0.08 0.74 1.17 0.96 -0.74 -1.47 -2.18 -0.51
-0.39 -1.63 -0.39 0.18 -0.27 -0.3 0.7 -0.42 -0.62 -0.27 0.57 0.13 0.2 0.46 -0.11 0.59
-5.44 -4.93 1.29 0.89 0.46 0.02 1.19 -0.37 -3.5 -2.64 1.83 0.97 -2.6 -3.99 -3.09 -3.19
-1.08 -1.48 -0.27 -0.03 0.03 0.35 -0.15 -0.65 0.01 0.41 1.71 1.24 -1.12 -1.68 -2.26 -0.8
-1.8 -1.6 0.19 -0.2 -0.25 0.06 0.31 -0.63 -0.02 -0.68 0.61 0.39 0.66 0.29 0.48 -0.08
-0.26 0.19 -0.04 0.04 0.15 -0.48 0.89 -0.49 -0.84 -0.63 0.65 0.82 -0.14 -0.5 -0.66 -0.25
0.08 -0.82 -1.32 -0.48 -0.81 -0.14 0.23 -0.48 -2.79 -0.08 1.15 0.94 -0.02 0.19 -0.04 0.65
-1.9 -2.53 -0.14 -0.78 -4.0 -6.64 1.01 0.05 -0.08 -0.87 1.25 1.38 -0.04 0.02 0.23 0.4
-0.11 -0.69 0.03 0.2 0.23 0.21 0.31 -0.38 -0.29 -0.15 0.98 0.67 -0.43 -0.74 -1.11 -0.23
-2.77 -5.85 1.17 0.06 -0.5 -1.41 0.63 0.71 -0.68 -2.07 2.43 0.84 -3.48 -4.22 -6.67 -3.52
-2.68 -1.44 -0.46 -0.41 -0.87 -1.12 0.97 0.14 0.13 -0.24 0.89 1.28 0.12 -0.49 -0.4 0.19
-4.78 -2.66 0.29 0.95 -0.3 0.81 1.44 -0.92 -0.26 0.18 1.54 0.61 -2.55 -6.65 -3.58 -2.35
-0.84 -0.2 0.03 0.15 -0.65 -0.95 0.61 -1.24 -0.91 -1.04 0.84 0.38 0.63 0.18 -0.25 0.76
- - -0.66 1.16 -0.75 -1.59 0.14 -1.71 -1.49 -0.59 0.36 -0.63 1.3 0.18 -0.11 1.74
-0.94 0.13 0.26 0.51 -0.03 -0.73 0.76 -0.6 -0.93 -1.33 1.12 1.22 -0.85 -0.54 -0.94 -0.66
-2.51 -1.65 0.38 1.02 -0.2 -0.33 1.73 0.04 -0.76 0.2 1.08 0.9 -2.46 -3.82 -5.07 -2.58
-0.41 -0.84 0.64 1.52 0.53 0.43 0.76 -0.31 -1.23 -0.86 0.56 0.39 -1.53 -1.96 -3.1 -1.06
-0.66 -1.13 0.47 1.16 0.23 -0.04 1.48 -0.65 -1.07 -0.88 1.17 0.6 -1.64 -2.62 -2.86 -1.7
-0.58 -1.47 -0.03 0.35 -0.28 0.3 0.41 -0.08 -0.34 -0.02 0.74 -0.05 0.43 -0.06 -0.55 -0.0
- -3.56 -0.35 -0.92 -0.95 -0.45 0.62 -4.7 -1.49 -1.43 0.89 -0.59 1.51 0.9 1.42 0.2
-3.08 0.05 0.09 -0.02 0.19 0.72 0.83 -0.49 -0.04 0.73 1.48 0.52 -2.61 -2.58 -2.26 -2.78
- -1.39 0.32 -0.33 -0.56 - 2.55 - - - 2.36 0.93 - - - -
0.2 -0.56 0.03 0.02 -0.13 0.1 0.91 -0.15 -0.25 -0.4 0.26 -0.98 -0.13 0.14 -0.56 0.46
-0.25 -0.5 0.64 1.05 0.54 0.26 0.19 -0.44 -0.46 -0.24 0.4 0.4 -0.75 -1.18 -1.09 -0.79
-1.48 -2.39 0.52 0.95 -0.14 -0.99 1.81 0.15 -0.75 -4.56 1.2 0.72 -0.79 -2.65 -1.14 -1.67
-0.19 0.23 -0.23 -0.14 0.13 -0.99 0.82 0.03 -0.59 -0.24 0.58 0.79 -0.56 -0.45 -0.32 -0.23
0.51 -1.47 0.02 0.8 0.49 -0.45 0.43 -0.56 -1.31 -1.72 1.55 1.24 -1.54 -2.05 -2.14 -1.06
-0.21 -0.52 0.24 0.14 -0.58 -0.86 1.08 0.21 -1.08 -1.61 1.02 1.12 -0.35 -0.88 -0.78 -0.42
-3.94 -2.85 1.1 0.7 -0.29 0.55 1.59 -0.31 -4.84 - 1.75 1.34 - - - -
-0.46 -0.76 -0.1 0.25 -0.31 -0.03 0.72 -0.41 -0.73 -0.65 1.13 0.58 0.16 -0.4 -0.8 0.01
0.25 -0.09 0.34 0.33 -0.38 -0.53 0.83 0.81 -0.87 -0.7 0.91 0.93 -1.55 -1.73 -2.01 -0.93
-5.52 - 0.45 1.0 0.13 0.3 1.55 -2.33 0.2 -1.23 1.55 1.06 - -5.5 -0.85 -
-6.08 -4.43 1.34 0.64 -0.55 -0.34 1.34 0.39 -1.78 -1.36 1.7 1.37 -7.45 -11.14 -9.06 -5.99
- - 0.46 -1.78 - 0.44 0.78 0.17 -1.5 - 2.5 1.29 - - 0.75 -
0.0 -0.17 0.04 0.2 -0.2 -0.09 0.47 -0.71 -0.46 -0.11 0.52 0.4 0.04 -0.34 -0.3 0.11
-0.28 -0.67 0.35 1.03 0.05 0.28 0.82 -0.3 -0.1 -0.05 0.81 0.39 -1.65 -1.57 -1.71 -1.08
-0.7 -0.84 0.37 0.61 0.06 0.09 0.86 -0.46 -0.39 -0.07 0.82 0.52 -0.55 -1.03 -0.94 -0.43
-1.31 -1.41 -0.31 -0.22 -0.08 0.49 -0.33 -0.28 -1.47 -0.94 1.42 1.09 0.43 -0.48 -0.67 0.27
-0.39 -1.37 -0.08 0.41 -0.05 0.03 0.47 0.02 0.06 0.31 0.69 -0.25 0.11 -0.28 -0.69 -0.11
- - -1.68 0.42 - -0.58 2.08 - - - 2.68 1.6 - - - -
-1.71 -1.33 0.58 1.11 0.41 -0.05 1.2 -0.18 -0.16 0.08 0.45 0.13 -0.98 -1.23 -1.82 -0.88
-0.13 -0.12 0.12 0.44 0.39 0.01 0.38 -0.0 -0.02 -0.17 0.74 0.28 -0.48 -1.08 -0.89 -0.69
0.14 -1.22 -0.4 -0.0 -0.02 0.02 0.67 -1.24 -1.3 -0.66 1.22 0.88 -0.03 -0.64 -0.49 0.2
-3.45 -0.58 0.24 0.76 -0.22 0.16 1.34 -1.19 0.06 0.84 1.51 0.58 -3.52 -4.91 -5.6 -3.25
-0.68 -3.0 -0.82 -0.25 -2.0 -0.29 -2.74 -1.59 -4.07 -2.44 2.02 0.86 1.0 0.57 -0.1 0.82
-2.88 - 0.58 -0.66 - -0.44 2.41 -0.51 -1.4 -1.35 2.01 -1.42 -0.1 -0.19 - -
-0.71 -2.65 -0.05 0.21 -0.43 -0.12 0.1 -0.17 -0.92 -0.7 0.77 -0.08 0.84 0.37 0.1 0.61
0.13 -0.02 -0.76 -0.21 -0.43 -1.18 0.99 -0.54 -2.21 -1.36 0.85 0.79 0.36 -0.15 -0.5 0.66
-1.38 -1.37 0.33 0.87 -0.05 0.14 0.51 -0.09 -0.05 0.13 1.09 0.56 -1.0 -0.93 -1.02 -0.93
-1.03 0.17 0.1 0.2 0.14 -0.0 1.34 -0.67 -1.05 -0.83 0.94 0.7 -0.7 -0.79 -1.05 -0.66
-0.25 -1.33 -0.22 0.13 0.04 0.15 -0.02 -0.62 -0.42 -0.25 1.15 0.7 0.28 -0.58 -0.82 0.2
-0.94 -1.49 -0.12 0.33 -0.31 0.2 0.76 0.24 -1.44 -0.92 1.91 0.21 -0.43 -1.62 -3.36 0.18
- - 1.6 0.75 - - 1.44 -1.61 -1.68 - 2.16 1.68 - -2.0 - -
-0.61 -1.6 -0.16 0.23 -0.22 -0.12 0.68 0.07 -0.29 -0.14 1.05 0.6 -0.09 -0.4 -0.79 -0.11
-1.88 -0.6 0.61 1.0 -0.21 -0.16 1.76 -0.28 -5.46 -0.7 1.45 1.05 - -5.22 -3.15 -
-0.24 -0.15 -0.02 0.33 0.09 0.2 0.56 -0.28 0.07 0.46 0.84 0.57 -1.13 -1.3 -1.04 -1.17
-0.74 -2.31 -0.29 -0.04 -0.5 -0.23 0.47 -0.15 -0.52 -0.1 0.72 -0.13 0.41 0.55 0.4 0.32
0.11 -1.38 0.37 0.55 0.43 -0.03 1.35 -0.02 -0.65 -0.62 1.05 -0.05 -1.07 -1.09 -2.13 -1.2
-0.8 -1.61 -0.22 -0.11 -0.23 -0.63 1.01 -0.82 -3.52 -0.87 0.86 0.53 0.58 0.07 0.03 0.84
-0.08 -0.26 0.23 0.4 0.1 0.15 0.51 -0.54 0.19 0.27 0.85 0.71 -1.17 -1.4 -1.71 -0.99
- 0.34 -0.08 1.58 -0.95 -1.11 2.34 -1.74 - - 1.92 -0.51 - - - -
-1.27 -0.9 0.48 0.49 -0.11 0.18 1.15 -0.72 -0.28 0.2 1.42 0.91 -2.06 -2.36 -3.08 -1.88
-0.66 -1.29 0.01 0.41 0.25 0.06 0.93 0.07 -0.69 -0.1 1.03 0.56 -0.15 -0.83 -2.02 -0.6
-2.48 -1.21 0.21 1.09 -0.13 0.48 1.43 -1.46 -0.15 -0.26 1.97 -0.04 -4.44 -7.12 - -4.48
0.31 -0.74 0.21 0.52 0.46 -0.31 0.97 -0.17 0.05 -0.18 0.48 0.22 -0.7 -1.1 -1.36 -0.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.