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Heatmap: Cluster_209 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-3.27 3.83 - -1.53 -3.33 -2.9 - - - - - - - -3.64 0.02 -
- 3.95 -0.95 - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
-0.54 3.01 -0.98 - - -1.02 - -2.64 -0.4 - 0.69 - - - 1.9 -
-1.98 1.17 -1.16 - - -3.19 -3.83 -2.65 - - -1.48 - 1.07 2.36 0.73 1.8
- 1.29 - - - - - - - - - - - - 3.76 -
- 4.0 - - - - - - - - - - - - - -
-1.77 3.86 - - - - - -1.61 - - -0.28 - - - - -
- 3.78 -2.42 -0.08 - -0.64 - - - - -1.16 - - - - -
- 4.0 - - - - - - - - - - - - - -
- 2.77 - - - - - - - - - - - - 3.2 -
-1.44 3.97 - - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
- 0.64 - - - - - - - - - - 2.82 1.72 1.47 0.38
- 2.01 - - - - - - - - - - - - 3.58 -
- 3.86 -2.03 - - -1.06 -3.29 -2.99 - - -1.43 -3.03 - - - -
- 3.86 -2.03 - - -1.06 -3.29 -2.99 - - -1.43 -3.03 - - - -
-4.07 3.7 - - -2.14 - -1.13 -4.78 -2.7 - -2.36 - - -1.45 0.62 -
- 4.0 - - - - - - - - - - - - - -
-2.44 3.93 - - - - - - - - - - - -3.16 -1.09 -
-1.12 3.95 -8.05 - -6.51 -8.68 - -5.38 -9.07 - - -9.08 -7.73 -8.82 -6.75 -6.26
0.05 3.34 - -1.49 - -1.44 -2.5 -2.0 -1.23 - -1.72 - -1.5 -2.6 1.06 -1.63
- 4.0 - - - - - - - - - - - - - -
-3.81 2.25 - - - - -3.31 - - - - - 1.68 0.85 1.33 1.82
- 0.93 - - - - - - - - - - - - 3.82 -
- 4.0 - - - - - - - - - - - - - -
-1.53 3.65 -1.26 -2.36 -2.26 -1.43 -3.8 -0.84 - -3.09 -3.06 -1.84 -2.84 -3.9 -0.83 -
0.01 3.36 - - -1.62 - - - - - - - - - 2.13 -
- 4.0 - - - - - - - - - - - - - -
- -0.84 - - - - - - - - - - 0.63 1.34 3.41 -0.49
- 3.96 -3.24 -2.91 -3.12 -3.28 - - - - - - - - - -
- 3.07 - - - - - - - - - - - 2.92 - -
- 3.87 - - - - - - - - - - - - 0.43 -
- 4.0 - - - - - - - - - - - - - -
-1.08 3.93 - - - - -9.19 -3.08 -4.49 -2.8 - -7.96 - - - -
- 3.66 -2.3 -3.41 -2.25 -1.78 -1.67 0.81 - - -2.56 -1.9 - - -3.66 -
- 4.0 - - - - - - - - - - - - - -
- 2.11 - - - - - - - - - - - - - 3.55
- 4.0 - - - - - - - - - - - - - -
-2.15 2.75 - - - - -0.01 -4.33 - - - - 1.25 0.15 1.22 1.12
- 4.0 - - - - - - - - - - - - - -
-2.26 3.85 - - - - - - -1.44 -1.38 -1.35 -2.04 - - - -
-3.51 1.48 - - - - - - - - - - 0.25 2.32 2.54 0.12
- 4.0 - - - - - - - - - - - - - -
-2.5 3.8 - - - -4.45 - -4.89 - - - - 0.09 -1.79 -2.52 -1.62
-0.59 3.94 - - - - - - - - - - - - - -
-2.09 3.98 - - - - - - - - - - - - - -
- 3.23 - - - - - - - - - - - - 2.73 -
- 3.87 - - - - - 0.48 - - - - - - - -
-2.58 3.48 -2.82 -2.81 -0.61 -1.18 1.2 -2.92 - - -1.57 -1.78 -3.22 -5.32 -3.25 -
- 4.0 - - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
- 2.91 - - - - - - - - - - - 3.08 - -
-2.99 3.76 - - - - - - - - - - - -0.4 0.67 -
- 4.0 - - - - - - - - - - - - - -
- 0.78 - - - - - - - - - - - - 3.84 -
- 4.0 - - - - - - - - - - - - - -
- 3.07 - - - - - - - - - - - - 2.93 -
-2.39 3.93 - -5.65 - - -5.66 - -4.41 - - - - -4.17 -1.51 -4.2
-4.27 2.56 -5.69 -7.14 -5.06 -4.82 -6.08 -3.42 - - -9.62 -8.72 1.56 0.85 -0.02 2.04
-1.09 3.84 - - -2.64 -2.52 - - -3.48 - -3.39 - - -2.26 -1.19 -
- 2.74 - - - - - - - - - - - 3.22 - -
-0.89 3.93 -4.88 - -5.33 -6.09 -5.72 -9.11 -7.48 -7.42 - - - -4.65 -3.58 -
- 3.79 -1.13 -1.37 -1.01 - -3.39 -1.23 - - - - - -1.9 - -
- 4.0 - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.