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Heatmap: Cluster_323 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.33 -0.76 -0.38 -1.21 -0.37 -0.22 0.04 -1.03 -1.72 -0.78 -0.22 -0.49 0.91 0.74 0.89 0.96
0.17 -0.31 -0.75 -0.71 -0.3 0.08 0.73 -0.22 -0.07 0.08 0.55 -0.12 0.34 0.15 -1.0 0.27
0.4 -0.44 -0.36 -0.15 0.01 0.06 0.88 0.06 -0.31 -0.07 0.14 -0.75 0.17 -0.16 -0.59 0.24
0.24 -0.25 -0.31 -0.29 -0.32 -0.36 0.11 -0.34 -0.28 -0.37 0.12 -0.09 0.44 0.26 0.53 0.35
-2.7 0.48 -2.0 -1.89 0.58 -0.06 1.16 0.24 -1.13 0.15 -0.55 -0.07 -0.44 0.39 -0.47 1.07
-0.44 -0.05 -0.61 -1.27 -0.23 -0.21 0.37 -0.86 -1.01 -1.21 -0.36 -0.31 0.93 1.1 0.92 0.28
-0.62 0.24 -0.61 -0.81 0.48 0.01 0.82 0.12 0.11 -0.29 0.04 0.5 -0.25 -0.26 -0.3 -0.23
0.24 -0.94 -1.27 -2.99 -0.58 -0.38 -0.34 -1.42 -3.06 -2.18 -0.4 -1.55 1.54 1.56 0.95 0.95
0.23 0.27 -0.27 -0.28 0.06 0.13 0.6 -0.33 0.35 -0.17 -0.05 -0.25 -0.05 -0.28 -0.2 -0.15
0.49 -0.45 -0.69 -1.83 -0.47 -0.44 -0.37 -0.75 -1.38 -1.26 -0.19 -0.81 1.08 0.86 0.94 1.03
0.71 0.06 -0.24 -0.92 -0.15 -0.04 -0.18 -1.17 -0.1 -0.08 0.29 -0.08 0.27 0.29 0.31 0.06
0.26 -0.37 -0.56 -0.3 -0.17 0.27 0.7 -0.05 0.26 0.03 0.43 0.37 -0.19 -0.84 -0.71 -0.06
0.13 -0.69 -1.01 -1.65 -0.65 -0.51 0.49 -0.59 -0.82 -0.72 -0.21 -0.68 0.83 1.04 1.0 0.64
0.86 0.54 -0.11 -0.5 0.18 0.15 0.14 -1.05 -0.66 -0.98 0.31 0.08 -0.53 0.03 0.58 -0.67
0.27 0.46 -0.12 -0.55 0.06 0.33 0.95 -0.29 -0.0 -0.23 0.27 0.58 -1.09 -0.97 -0.71 -0.68
0.23 -0.51 -1.26 -1.65 -0.49 -0.14 0.42 -0.39 -1.06 -1.55 -0.28 -0.49 0.8 1.09 0.62 0.93
-0.94 -0.55 -0.24 -1.21 -0.29 0.32 0.71 -0.99 -0.69 -0.65 0.15 -0.01 0.65 0.67 0.63 0.31
0.62 -0.43 -0.33 -1.34 -0.08 0.01 0.14 -0.72 -0.46 -0.43 0.07 -0.46 0.41 0.46 0.78 0.27
0.37 0.89 -0.21 -1.17 -0.41 -0.44 -0.05 -0.73 -3.45 -2.78 -1.08 0.22 0.93 0.69 0.28 0.91
0.46 0.47 -0.11 -0.32 0.33 0.2 0.64 -0.25 0.54 0.01 0.31 0.55 -1.36 -1.74 -1.35 -1.09
0.65 0.47 0.02 -0.38 0.21 0.01 0.32 -0.38 -0.26 -0.4 0.19 0.45 -0.32 -0.51 -0.61 -0.29
-0.1 0.1 -0.19 -0.39 0.34 0.01 0.71 -0.01 -0.01 -0.44 0.4 0.57 -0.43 -0.51 -0.41 -0.47
0.5 -0.27 -1.11 -1.25 -0.55 -0.46 0.59 -0.32 -1.09 -0.68 -0.41 -1.4 0.73 0.63 1.11 0.64
0.62 0.76 -0.14 -0.71 0.16 -0.04 0.2 -0.66 -0.77 -1.58 -0.04 0.42 -0.09 0.13 0.28 -0.16
-0.11 -1.92 -1.0 -1.83 -0.81 -0.5 0.69 0.12 -0.9 -0.48 0.39 -0.55 1.14 0.78 0.22 0.79
-1.81 0.22 -0.09 -0.31 0.49 0.53 1.57 -1.43 0.54 -0.16 0.49 0.88 -2.18 -2.5 -1.38 -2.14
0.2 0.25 -0.69 -1.28 -0.23 -0.13 0.36 -0.56 -0.52 -0.36 -0.11 -0.2 0.21 0.52 1.01 0.02
0.29 -0.08 -0.44 -0.66 -0.34 -0.21 0.35 -0.62 -0.84 -0.71 -0.09 -0.07 0.54 0.62 0.53 0.46
0.57 0.36 -0.92 -2.09 -0.5 -0.73 0.37 -1.08 -2.73 -1.59 -0.17 0.04 0.75 0.74 1.22 0.4
0.32 -0.43 -0.22 -1.16 -0.4 -0.17 -0.1 -1.05 -1.43 -0.85 -0.32 -0.81 0.59 0.85 1.33 0.59
-0.01 -0.53 -0.64 -0.84 -0.47 -0.18 0.39 -0.42 -0.36 -0.43 -0.01 -0.25 0.72 0.42 0.44 0.81
0.53 -0.11 -6.24 - -0.54 -0.55 0.62 -0.63 -0.37 -1.45 -1.03 -1.52 1.16 0.61 0.4 1.58
-0.11 -0.42 -0.74 -1.46 -0.39 -0.4 0.07 -1.26 -1.72 -0.74 -0.41 -0.35 1.05 1.06 0.86 0.97
0.6 0.06 -0.37 -0.99 -0.19 0.02 0.19 -0.74 -0.11 -0.11 -0.1 -0.01 0.19 0.2 0.46 0.14
-0.09 -0.95 -1.52 -2.07 -0.65 -0.52 0.6 -0.39 -0.76 -1.15 -0.61 -1.58 1.2 0.83 0.81 1.31
0.26 0.19 -0.43 -1.11 -0.18 0.02 0.42 -0.35 -0.49 -0.58 0.16 0.07 0.38 0.44 0.32 -0.01
0.44 -2.07 -0.72 -1.65 -0.54 -0.25 0.73 -0.55 -0.96 -0.14 0.51 -1.19 0.57 0.72 0.9 0.39
-0.12 -0.19 -1.44 -1.62 -0.76 -0.46 0.81 -0.63 -0.46 -0.14 0.15 -0.38 0.97 0.72 -0.17 0.83
0.42 -0.41 -0.86 -1.41 -0.18 0.01 0.31 -0.35 -0.99 -0.52 0.02 -0.28 0.67 0.71 0.33 0.63
0.64 0.26 -1.03 -1.55 -0.19 -0.02 0.0 -1.05 -0.44 -0.31 -0.33 0.36 -0.02 0.38 0.93 0.31
-0.21 -1.03 -0.59 -1.18 -0.33 -0.19 0.53 -0.33 -0.4 -0.75 0.24 -0.58 0.74 0.85 0.63 0.49
-0.09 -1.33 -1.05 -1.8 -0.41 -0.66 0.43 -0.16 -0.97 -0.66 0.26 -0.75 1.16 0.71 0.81 0.76
-0.88 0.6 -0.12 0.16 0.78 0.57 1.13 -1.5 -0.35 0.19 0.4 0.12 -1.06 -1.25 -1.16 -1.04
-0.36 -0.44 -2.63 -1.47 -0.74 -1.12 0.02 -2.76 -2.41 -1.04 -0.88 -0.17 1.48 1.55 1.2 0.69
0.17 0.62 -4.52 -7.64 0.25 0.35 1.18 -0.34 -1.25 -1.3 0.39 0.3 0.53 -0.38 0.07 0.18
0.49 0.07 -0.42 -1.2 -0.08 -0.22 0.13 -0.99 -1.22 -0.97 -0.17 0.17 0.38 0.64 0.77 0.53
0.18 -0.8 -0.43 -1.34 -0.31 -0.1 0.42 -0.65 -1.32 -1.07 -0.18 -0.52 0.71 0.98 1.06 0.38
-0.04 0.15 -0.96 -0.73 0.71 0.52 1.11 -0.54 -1.43 -0.21 0.52 0.51 -0.23 -0.51 -1.13 -0.37
0.36 -0.33 -0.88 -1.29 -0.39 -0.53 -0.05 -0.68 -0.78 -0.38 -0.78 -0.29 0.74 0.83 1.03 0.74
0.36 0.36 -0.63 -1.03 -0.24 -0.31 0.5 -0.93 -0.74 -0.83 0.2 0.25 0.22 0.4 0.64 0.24
0.18 -0.34 -0.39 -0.77 -0.47 -0.4 0.45 -0.39 -0.76 -1.01 0.19 -0.03 0.31 0.64 0.89 0.33
-3.71 - 0.48 -0.98 0.77 0.77 1.93 -2.87 0.63 -0.67 1.58 0.5 - -3.64 - -
-0.32 -0.02 -1.29 -2.01 -0.61 -0.36 0.21 -0.5 -1.94 -1.78 0.16 0.09 0.71 0.83 0.8 1.24
0.47 0.09 -0.44 -1.3 -0.2 -0.32 0.1 -1.34 -2.25 -0.91 -0.29 -0.22 0.97 0.97 0.66 0.43
0.67 0.29 -1.99 -0.91 0.09 -0.67 0.67 -0.66 -0.61 -0.69 -0.39 -1.19 0.59 0.57 0.19 0.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.