1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_73 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-3.27 - -0.49 0.13 -2.39 -1.58 0.6 0.47 3.13 -1.74 -0.2 -0.43 - - - -5.54
-0.83 -4.56 -2.09 -1.81 -1.53 -0.74 -0.25 -0.99 2.76 0.87 -1.74 -3.51 0.41 -0.2 -1.7 0.12
-0.1 -0.27 - - - - - 1.0 3.28 1.34 - - - - - -
- - -3.32 - - - -3.41 - 3.56 2.01 - - - - - -
- - - - - - - 1.01 3.81 - - - - - - -
-6.35 -0.29 -8.36 -8.03 -8.23 -5.4 -4.17 0.96 3.43 1.15 -3.53 -5.8 - -6.54 - -
-1.93 -1.34 -1.09 -0.2 -3.74 -0.79 -0.53 0.76 2.46 1.14 0.28 -0.32 -1.54 -2.77 -2.81 -0.69
-5.9 -4.66 -1.51 -2.22 -3.71 -3.35 -3.99 -2.02 3.6 1.36 -3.96 -4.48 - -4.24 - -4.86
-2.87 -2.14 -2.74 -2.35 -2.15 -0.9 -1.1 0.62 2.94 1.11 0.69 -0.5 -2.88 -3.73 -3.94 -3.3
-2.57 -2.16 -2.27 -0.62 -1.65 -3.05 -1.62 0.28 3.05 1.75 -1.6 -1.64 -2.93 -3.25 -3.59 -2.65
- -4.09 - - - - -4.84 -4.67 3.48 2.05 -4.48 -3.0 - - -1.28 -
-7.09 -2.47 -0.78 -0.69 -0.26 -0.57 - - 3.33 1.53 -2.97 -5.66 - - - -
-9.36 - - -8.24 - -8.6 -6.07 -1.04 3.47 1.88 -1.22 -1.68 - - -5.68 -
- - - - - - - 0.44 3.17 1.41 - - 0.64 - - 0.52
-0.15 - - - -0.76 -0.91 - - 3.1 1.77 - - - - 1.0 -
- -1.74 -1.44 -2.92 -3.63 -1.52 - - 3.62 1.27 -3.59 - - - - -
-0.35 -0.65 -2.01 -2.04 -1.87 -1.43 -0.61 0.76 2.48 0.99 -0.96 -1.45 -0.77 -0.63 -1.07 -0.09
-0.49 - - - - - - -0.67 3.64 1.11 - - - - - -
- - - - - - -1.18 -3.16 2.75 -0.3 - - -0.6 2.01 1.38 -0.72
- - - - - - -0.35 - 3.47 0.95 - - - 1.14 - -
-1.03 -2.77 -4.96 -4.37 -6.67 -4.73 -5.52 -1.99 3.27 1.79 -2.98 -1.11 -7.55 -7.21 -4.19 0.24
-2.46 0.33 -2.06 -2.17 -1.41 -1.07 -1.15 -1.47 3.01 1.37 -1.35 -1.32 -1.65 -1.75 -3.4 -1.82
-1.95 -3.34 -4.38 -3.27 -3.4 -2.41 -1.59 -1.35 3.2 2.03 -1.78 -2.72 -2.39 -3.03 -2.98 -1.53
0.89 - - - - - -1.01 -0.4 3.54 0.28 - - - - - -
- -7.32 -5.47 -7.46 -3.41 -3.51 - 1.05 3.65 -0.5 -1.51 -3.43 - - - -
-4.08 0.01 -3.29 - - -4.91 -3.54 -3.13 3.18 1.76 -0.5 -2.31 -1.21 -0.53 - -3.0
- - - -0.51 -0.77 -0.88 - -1.27 3.22 1.81 -0.14 - - - - -
- - -1.05 -0.72 - - - - 2.69 1.17 - - 1.86 1.35 - -
-0.36 -0.38 -2.14 - -2.01 -2.17 -1.48 0.63 3.0 1.2 -2.46 -1.57 - -2.32 -0.25 -
- 0.02 - -0.66 - - - 0.6 3.49 0.65 - - - - - -
-1.77 -2.57 -3.82 -2.65 -3.18 -4.18 -3.06 -0.33 3.17 2.07 -1.44 -2.42 -2.42 -3.33 -3.26 -3.35
-1.45 -1.48 -1.28 -0.55 -2.22 -0.68 -2.09 -0.63 2.76 1.78 -1.3 -1.88 -0.72 -1.57 -2.86 -0.98
-1.99 0.17 -2.71 -2.71 -1.93 -0.03 -1.08 -1.11 2.62 0.63 -1.05 -1.87 0.1 -0.18 -0.66 0.12
-2.01 -0.3 -5.45 -3.53 -3.24 -2.31 -1.15 -3.78 3.35 1.27 -0.03 -1.26 - - - -
-5.95 -5.06 -0.76 -0.01 -1.62 -1.53 -0.84 0.91 2.57 1.92 -0.74 -0.37 -4.26 -6.44 -4.79 -4.22
-10.0 -9.37 -8.1 -7.02 -3.32 0.17 -8.78 -7.54 3.45 1.74 -2.17 -2.09 -10.73 - - -
-1.56 -2.67 -2.33 -1.66 -2.4 -2.34 -0.02 1.04 2.83 1.44 -1.03 -1.78 -1.7 -2.24 -3.46 -1.56
-2.57 -0.59 - - - -3.72 -4.37 -1.7 3.3 2.15 -2.42 -2.11 - - - -
-3.81 - - - - - -4.69 -2.86 -0.12 - - -3.46 1.6 1.66 -1.13 3.02
-5.0 - - - - - - 0.65 3.62 0.64 -3.5 - -2.27 -1.78 - -
-10.82 -0.67 -9.86 - - - -9.54 -0.57 3.49 1.79 - - - - - -
- - - - - - - - 3.57 2.04 - - - - - -
-2.79 -1.5 -0.48 -0.25 -0.66 0.25 -1.9 -1.12 2.83 1.25 -2.15 -3.26 -2.92 -2.48 0.03 -2.15
- - - - - - - -1.41 0.78 - - - 2.79 -0.63 - 2.67
-0.88 -1.09 -2.39 -2.9 -2.5 -0.93 -0.64 0.42 2.83 1.32 -0.15 -1.19 -1.91 -2.05 -2.55 -1.52
-6.62 0.37 -3.82 -3.9 -3.1 -2.0 -3.91 -1.31 3.47 0.37 -2.83 -4.26 -1.59 -2.42 -2.93 -0.86
-1.21 - - - - -2.23 - - 3.58 1.78 - - - - - -
- - -6.56 -7.22 -5.87 -7.58 -6.24 0.7 3.72 0.18 - - - - - -
- - - -5.31 - - - 1.66 3.31 1.55 - - - - - -
- - - - - - - -2.33 -0.22 -1.96 -2.93 - 2.7 1.03 - 2.58
-3.94 -9.54 -0.86 -1.05 -2.01 -1.89 -0.53 -0.77 3.07 1.08 -5.57 -4.09 -1.45 -0.17 0.16 -3.24
- - - - - - - -1.98 3.54 1.65 - - - - - -0.08
- -1.28 - - - - - - 3.45 2.15 - - - - - -2.1
-0.75 -0.47 -2.06 -1.94 -1.71 -1.5 -0.69 -0.46 2.64 1.05 -0.09 -0.25 -1.06 -1.53 -0.86 -0.53
-0.45 -0.66 -1.8 -1.36 -0.9 -0.45 -2.17 -0.07 2.88 1.43 -1.81 -1.37 -3.71 -3.43 -1.06 -2.84
-7.56 -7.31 -0.87 0.54 -4.65 -4.23 -4.86 1.15 2.71 1.68 0.17 -0.39 - - - -
- -2.12 -2.32 -4.79 -5.66 -8.31 -10.27 -0.15 3.29 2.16 -4.31 -1.7 - - -8.71 -
- - - - - - - 1.33 3.75 - - - - - - -
- - - - - - - -3.39 3.42 2.27 - - -1.96 -3.06 - -
- - - - - - - - 3.6 1.27 0.58 - - - - -
-3.73 -1.28 -1.76 -2.62 -2.87 -2.92 -3.6 -0.92 2.81 0.7 -5.12 -4.81 1.08 0.16 -0.98 0.78
-1.88 - - - - - - - 3.67 1.56 - - - - - -
-2.79 -1.5 -6.19 -6.35 -5.87 -5.23 -3.24 1.54 3.11 1.41 -0.55 -1.84 -3.5 -5.86 - -4.62
- -0.57 -2.03 - - - - - 3.3 1.77 - - - - 0.86 -
- - - - - - - -2.98 1.08 -0.19 - - 2.84 2.26 - -0.09
- -2.47 -0.43 0.23 - -1.14 -2.52 1.1 3.35 - -2.74 -1.85 - -1.04 - -
- - - - - - - -3.8 -1.44 - - - 2.14 1.9 0.8 2.51
-3.06 -5.07 -3.98 -3.95 -6.47 -6.64 -7.28 -4.17 1.65 0.17 -3.95 -6.05 0.73 0.89 2.3 1.52
-3.01 -6.31 - - -6.42 -5.37 -7.81 -0.14 3.41 1.55 -0.25 -2.34 -5.22 -2.51 -5.25 -4.34
- - - - - - -1.04 1.06 2.92 1.28 - -0.79 - - 1.52 -
-0.34 0.03 -2.08 -1.61 -0.93 -1.44 -0.59 0.88 3.06 -0.09 -1.2 -1.34 - -6.55 -4.48 -5.0
- -1.66 - - - - -3.11 0.69 3.77 - -1.78 - - - - -
- - - - - - - - 3.57 2.05 - - - - - -
- - -3.01 - - - - - 3.29 2.08 - - - - 0.88 -
-3.55 -1.58 -3.49 -3.17 -3.9 -3.09 -4.38 1.65 3.18 1.41 -4.57 -4.68 -4.11 -3.74 -5.84 -5.35
-5.87 - -5.27 - - - -2.22 -1.77 3.34 1.74 0.5 -1.03 -4.68 -5.78 -4.71 -
-0.49 -1.7 -5.34 -4.45 -4.62 -3.65 -4.43 -0.19 3.27 0.62 -3.26 -5.4 0.03 -0.46 -3.69 -0.5
-4.15 -2.07 - -4.22 -6.01 - -5.81 -3.99 3.55 1.67 -1.01 -2.77 - - - -
-3.61 - - - -2.91 - - -6.02 3.48 2.05 - - -2.45 - -2.47 -3.57
-5.12 -5.37 -4.89 -6.02 -6.21 -6.06 -4.1 -1.94 3.68 1.34 -5.73 -4.98 -3.78 -4.64 -4.47 -
- - - - - - - - 3.58 2.03 - - - - - -
- - - - -5.2 - - 0.58 3.51 1.61 - - - - - -
-4.68 -0.75 -2.1 0.28 -1.19 -0.92 -2.26 - 3.03 1.96 -0.59 - - - - -
-3.43 -2.33 -4.7 -5.5 -4.75 -3.76 -2.86 1.59 3.24 1.27 -4.04 -3.43 -2.92 -2.92 -5.26 -3.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.