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Heatmap: Cluster_197 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-3.06 2.82 -0.88 -1.25 -0.13 -1.81 -1.26 0.03 0.69 -2.95 -3.92 -3.02 -0.09 0.23 -1.7 -0.21
0.23 2.76 -0.83 -1.28 0.45 -1.53 -5.74 0.46 -0.61 1.04 - -3.52 - -1.25 -1.18 -1.7
-0.35 2.64 -8.36 -4.57 -4.53 -4.31 -8.03 -1.95 1.77 0.74 -2.7 -4.11 0.28 0.12 -1.77 -0.51
-0.06 2.19 -1.8 -2.34 -2.08 -0.36 -1.48 -2.17 0.69 1.11 -1.22 -1.66 -0.21 0.02 -0.43 0.31
-4.2 2.88 -1.36 -0.75 -2.66 -0.61 -0.08 -0.17 -0.42 0.61 -0.43 0.83 -5.19 -7.44 -8.12 -3.23
- 2.89 - - - - - -1.13 - 1.31 - - - - 2.5 -
- 3.23 - - - 1.38 - - 2.01 - - - - - - -
-8.42 3.12 -5.52 -6.44 -6.4 -4.96 -1.99 -0.75 1.97 1.26 -4.15 -5.19 - - - -7.33
-2.29 3.03 -0.94 -1.1 -2.03 -0.39 -4.94 -3.71 0.55 1.07 -4.59 -3.7 -1.28 -0.68 -4.7 -0.41
-0.55 1.49 -2.35 -2.22 -1.27 -0.82 -0.43 0.07 -0.81 -1.02 -1.16 -0.59 0.79 0.58 0.92 1.03
-4.42 3.14 -2.82 -1.68 -0.02 -2.35 -1.1 -3.11 -0.03 1.23 -2.64 0.43 - - -4.69 -4.79
1.48 3.31 - - - -1.46 - - 0.73 -0.79 - - - -0.61 - -
-0.35 2.52 -0.47 -0.05 -1.25 0.51 -5.19 -0.12 1.34 1.06 -3.72 -2.73 -4.8 -4.08 -7.53 -4.54
-0.1 2.25 -3.16 -2.52 -3.0 -1.1 -4.28 -0.76 0.33 -1.93 -0.72 -0.69 0.75 0.76 -0.49 0.98
-1.38 2.37 -2.33 -2.11 -0.41 -1.17 -0.53 0.48 0.03 -0.4 -0.56 -0.91 -0.18 0.83 -1.79 -0.29
- 3.39 - - - - - -4.63 0.39 1.97 - - - - -1.87 -
0.69 2.78 -1.91 -0.16 -1.04 -1.21 -0.58 -1.44 0.88 -1.28 -1.25 -2.94 -0.58 - - -0.12
-2.04 3.03 -0.27 -1.18 -2.54 -0.34 -0.0 -1.16 0.32 0.4 -1.7 -0.88 -2.43 -3.29 -4.03 -2.88
0.89 2.95 -2.98 -3.51 -2.68 -2.81 -0.17 -0.72 0.83 -1.13 -0.88 -1.2 -1.61 -1.21 -2.53 -1.78
-1.29 2.5 -2.09 -0.78 -2.4 -0.16 -1.38 0.58 0.94 0.42 -1.44 -2.22 -0.51 -1.01 -1.83 -0.28
- 3.54 - - - - - - - 2.12 - - - - - -
-1.76 2.53 -2.29 -1.78 -1.89 -1.44 -0.5 -1.21 1.56 1.06 -0.96 -0.29 -1.64 -1.89 -2.17 -1.09
-1.41 1.72 -1.41 -1.49 -1.54 -1.86 -3.08 -0.52 0.44 0.45 -1.52 -2.84 0.24 1.25 1.06 0.38
-4.73 2.64 -2.0 -1.63 -2.11 -1.04 -1.03 -0.17 1.56 1.17 -1.19 -0.59 -2.01 -2.56 -4.73 -1.77
-3.24 3.21 -3.79 -5.46 - -1.82 -5.46 -0.37 1.14 0.95 -1.22 -1.06 -1.55 -3.38 - -
- 3.1 - - - - - 0.81 0.93 -0.6 - - - - 1.64 -
- 3.04 - - - - - - 1.18 0.91 -1.05 -0.16 - - 1.17 -
-0.24 1.46 -1.8 -3.08 -1.91 -1.44 -1.15 -0.15 -1.08 -0.66 -1.66 -1.55 1.26 1.63 0.05 0.79
-0.05 2.15 - - -0.69 -0.44 -2.08 -5.07 1.18 -0.18 - -1.84 -0.49 - 2.07 -0.62
1.41 3.15 - - -4.08 -4.48 -4.43 -0.11 -1.93 1.59 - - -5.47 - -6.08 -3.86
- 3.73 - - - - - - - 1.45 - - - - - -
-2.48 3.45 - - -2.75 -3.5 - -3.54 0.37 1.61 - - - -2.06 - -
-4.38 2.77 -3.99 -2.07 -3.86 -0.25 - -0.32 1.36 1.27 -0.82 0.28 -3.66 -4.76 -2.69 -3.79
-1.97 3.0 -2.28 -2.4 -1.15 -2.07 -0.98 - 0.85 1.63 -2.25 -2.17 -2.83 -3.92 -0.85 -3.95
1.46 2.79 -2.7 -2.28 -3.76 -5.74 - - 2.35 -0.99 -5.04 -6.15 -3.79 -3.3 - -3.91
-1.82 2.12 -0.32 -0.28 -0.06 -1.76 -2.3 0.47 1.13 1.06 -1.82 -0.66 -0.72 -1.98 -1.48 -1.02
-5.86 3.15 -2.3 -0.69 -2.95 -1.97 0.18 -1.66 -1.14 -1.39 0.72 0.98 - -6.81 - -
-2.61 2.19 - - - - - -1.81 1.22 -0.04 - - - 1.1 2.17 0.07
-0.33 1.04 -2.53 -2.3 -0.8 -1.09 -1.09 -1.8 -0.52 -0.82 -1.49 -1.23 1.09 1.15 1.26 1.14
-0.67 3.12 -5.34 -3.58 -6.12 -6.1 -2.81 -0.58 2.18 -0.63 -2.03 -2.27 -6.34 -4.3 - -4.29
-0.89 2.04 -2.09 -0.35 -2.55 -2.13 -4.35 -1.94 1.48 0.65 -2.01 -0.8 -1.77 -0.86 0.21 1.28
0.94 2.38 -2.13 -1.32 -1.25 -1.08 -0.63 -1.01 0.81 0.74 -1.32 -0.98 -1.3 -0.38 -2.09 -1.08
0.53 2.35 -3.03 -3.18 -1.46 -0.62 -1.6 -1.14 -1.24 -2.02 -1.98 -2.26 0.71 0.5 0.63 0.75
0.27 2.85 -2.15 -2.08 -3.32 -2.1 -1.38 1.0 0.15 -1.09 0.05 -1.01 -1.29 -1.65 -2.28 -1.46
-0.72 3.47 - -3.32 - - -5.9 0.94 -0.02 0.35 - - - - - -
0.86 3.0 -2.77 -3.44 -0.83 -0.29 - -3.09 0.7 1.17 - - - -3.95 - -0.98
-1.73 2.92 -3.19 -3.66 -2.24 -2.36 -2.75 -0.13 0.44 1.29 -1.55 -1.75 -0.67 -1.1 -1.41 -0.84
0.09 2.95 -5.83 - -4.72 -5.85 -3.19 0.32 1.03 1.16 -2.8 -1.65 -1.13 -1.57 - -2.06
0.15 2.0 -0.98 -0.97 -0.7 0.08 -0.28 0.37 0.52 -0.23 -0.28 -0.14 -0.84 -1.31 -1.7 -0.31
1.46 2.8 -2.38 -4.63 -3.25 -1.3 -0.18 -0.25 -0.69 -0.01 -0.49 0.3 - -2.15 - -
-1.42 2.67 -4.72 -3.38 - - - -2.75 1.31 0.11 -4.02 - 1.36 0.26 -1.84 0.39
-4.71 3.05 -2.73 -4.99 -0.8 -0.29 - 0.78 0.75 -0.2 -3.65 -4.01 -1.79 -1.13 -1.19 -1.04
-0.51 3.42 - - -2.71 - -3.51 0.11 -0.66 1.28 - -2.25 - - - -
-0.33 1.73 -2.66 -1.88 -0.46 -1.91 -1.27 -2.16 0.9 -0.41 -1.2 -1.05 -0.04 -0.0 1.78 -0.17
0.64 2.2 - -3.27 -2.51 - -4.29 - - -1.94 - - 1.45 0.99 0.26 1.74
-0.17 1.97 - - - - -5.13 -2.07 0.15 0.06 -2.76 -3.28 1.15 0.84 -0.25 1.88
-0.77 2.02 -0.97 -0.83 -1.55 -0.86 -1.29 -0.26 1.22 0.77 -1.14 -0.96 -0.56 -0.02 -1.21 0.06
0.61 2.44 -7.85 - -6.13 -2.79 -6.52 -2.3 2.06 -0.36 - -7.29 0.41 -0.16 -2.96 0.44
- 2.96 - - - 0.75 - - 1.95 1.43 - - - - - -
-0.4 2.76 -0.63 -0.3 - -0.67 - - 0.35 - - - - 1.99 - 0.16
-2.68 2.27 -3.2 -3.28 - -3.43 -0.32 0.36 1.51 -0.83 -1.29 -4.05 -0.39 -0.69 0.42 1.01
0.4 2.74 -2.83 -2.02 -2.11 -3.57 -2.11 -2.06 0.68 0.19 -0.04 -0.57 -0.91 -1.86 -0.94 0.15
0.51 1.83 -1.04 -1.47 -0.53 -0.46 -0.5 -1.04 0.71 0.32 -0.51 -0.52 -0.26 -0.4 -0.22 -0.29
-0.99 1.65 -2.11 -1.78 -2.83 -1.31 -2.14 -0.92 0.25 0.16 - -4.71 1.62 0.79 0.42 1.03
- 1.91 - - - - - -2.25 1.06 - - - - - 3.31 -
-2.9 3.08 -3.28 -3.53 -3.07 -3.35 -2.01 0.6 1.11 -0.09 -0.57 -0.13 -3.54 -3.83 -2.98 -1.86
0.19 1.37 -0.58 -0.23 -0.48 -0.52 -0.39 -0.83 0.53 0.29 -0.26 -0.17 -0.09 0.0 -0.8 0.16
-1.36 2.69 -0.08 -1.01 -0.14 -1.79 -1.54 -0.4 0.43 0.72 -0.4 0.26 -3.29 -4.24 -2.9 -2.73
- 3.34 - - - - - - 2.56 - - - - - - -
-2.04 2.79 -2.68 -1.15 -0.89 -0.22 0.17 -3.67 1.24 1.08 -0.58 -1.32 - - - -3.69
- 2.49 - - - -0.77 - - -0.15 - - - - - 3.15 -
-0.57 2.35 -3.73 -1.92 -2.37 0.19 -3.64 -1.86 0.78 -2.48 -3.87 -3.27 0.73 1.4 0.39 -0.96
1.18 3.26 - - -1.68 - - - 0.77 -1.17 -1.14 0.34 - - - -
- 3.13 - - - - - - 2.55 0.49 - - - - - -
- 3.26 - - - -1.3 - -2.09 1.18 1.55 -0.7 - - - - -
-1.16 3.25 - - - - -2.42 -4.64 1.01 0.83 -3.78 - -1.21 -1.82 -0.24 -1.34
0.49 2.99 - - - - - -4.18 1.97 0.65 - - - -1.9 -1.05 -1.42
0.47 1.58 -0.48 -0.55 -0.53 -0.38 -0.24 0.05 -0.06 0.13 -0.49 -0.07 -0.09 -0.42 -0.87 -0.12
0.39 2.94 -3.38 -3.04 -2.77 -1.23 -2.24 -0.06 0.61 -1.24 -0.82 -0.78 -0.67 -2.89 -2.3 -0.03
0.63 2.58 -1.7 - - - - 0.41 -0.56 -0.49 -0.46 -1.15 - -0.29 1.78 -
0.57 1.81 -0.81 -0.58 -0.75 -0.27 -0.66 -0.46 0.15 0.14 -1.19 -0.98 0.1 0.07 -0.62 0.05
-0.34 1.35 -4.4 -3.48 -2.28 -3.11 -1.62 -1.9 -0.81 -0.95 -3.72 -1.82 1.09 1.73 1.29 1.19
- 3.1 - - - - - - 2.89 - - - - - - -
-3.45 2.49 -0.57 - -2.13 -2.27 -1.24 0.82 1.87 0.79 -2.29 -0.98 -1.66 - -1.69 -1.79
-1.93 3.61 - - - -0.19 - -0.99 0.42 - - - - -0.33 - -
0.66 2.35 -0.86 -3.05 -0.62 -0.11 -1.43 -0.52 0.13 -0.36 -1.28 -2.18 -0.68 -0.72 0.03 0.31
- 3.51 - - - - - -5.0 0.77 1.54 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.