1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_174 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.3 -3.3 - - - - - - - - - - 2.43 1.99 -0.22 2.4
1.77 0.96 -3.55 -4.9 -3.9 -3.17 -1.32 -1.83 -2.46 -2.04 -1.14 -1.43 1.3 1.11 0.55 1.23
0.2 -1.11 -6.48 -6.0 -6.62 -6.0 -8.11 -3.42 -8.5 -9.18 -4.54 -4.63 1.7 1.52 2.06 1.95
1.23 1.54 -0.26 -1.32 -1.71 -2.69 -2.15 -2.65 -3.09 -3.03 -1.99 -4.1 1.59 0.63 0.83 0.84
1.3 0.12 -1.19 -1.28 -1.56 -2.65 -3.13 -1.32 -1.75 -1.56 -5.11 - 1.22 0.99 0.92 1.89
2.11 1.07 -2.66 -3.23 -3.91 -3.82 -2.39 -2.13 - -5.74 -2.9 -1.9 1.25 0.98 0.61 1.29
2.02 1.31 -1.11 -1.83 -4.44 -3.87 -2.83 -1.69 - - -2.32 -0.95 1.0 0.66 -0.46 1.65
2.33 1.31 -4.94 -4.59 -1.84 -2.14 -2.63 -1.64 -4.31 -2.26 -2.21 -2.74 1.54 -0.06 -0.07 1.0
2.09 0.64 -1.02 -1.0 -0.78 -1.36 -0.32 -0.7 0.0 -0.14 -0.18 -0.38 -0.24 -0.4 -0.53 -0.09
3.26 2.69 - - - - - - - - - - - - - -
0.91 0.51 -0.69 -1.63 -0.96 -0.92 -0.52 -1.12 -0.67 -0.65 -0.99 -1.07 0.66 0.95 1.05 0.79
1.88 0.24 -1.62 -1.01 -3.43 -3.6 -3.64 -1.33 -0.88 -2.35 -1.4 -1.68 0.36 1.42 0.83 1.32
-1.02 -2.55 - - - - - - - - - - 2.13 2.08 1.69 1.81
3.15 2.57 - - - - -2.41 - - - -0.66 -2.76 - -2.5 - -
3.12 1.9 -2.53 -2.33 -1.88 -2.41 -3.62 -1.61 -1.81 -1.72 -1.71 -3.4 -1.13 -1.68 -2.35 -1.33
3.39 2.47 - - - - - - - - - - - - - -
2.23 1.64 0.34 -0.81 -1.33 0.08 -4.13 -1.94 -1.32 -2.84 -1.81 - 0.04 -0.32 -0.57 0.33
2.33 3.11 0.67 - -1.78 - - - - - -2.25 - - -2.09 - -
0.18 -0.56 -8.61 - -8.48 -7.06 -6.47 -7.18 -5.45 -4.81 -6.94 -8.05 2.19 2.02 1.11 1.73
0.64 0.21 - - - - -5.83 -6.4 - -4.52 -6.07 - 1.97 1.42 1.23 2.09
3.37 1.33 - - - - -2.29 -2.74 - - -0.89 - - - - 1.16
2.16 1.75 - - - - - - - - - - - - - 3.03
1.35 0.28 -1.64 -2.03 -1.52 -1.22 -0.57 -1.31 -1.56 -0.77 -0.92 -1.0 1.08 0.72 0.28 1.53
1.8 0.73 -1.87 -2.07 -1.29 -0.78 -1.17 -0.57 -0.63 -0.52 -1.66 -1.95 0.63 0.65 0.54 0.8
3.52 2.08 -7.77 - -7.64 -3.64 -3.4 -7.81 -5.62 -5.15 - -6.22 - - -4.88 -
2.9 1.72 -0.64 -1.54 -1.15 -1.68 -0.73 -0.35 -2.3 -3.83 -1.79 -0.73 -0.95 -2.05 - -2.66
3.4 2.32 - - -2.65 - - -6.42 - - - - - - - -1.84
3.47 2.28 - -7.2 -7.41 -6.99 - -8.61 -5.37 - -6.86 -6.97 - -7.72 - -
-0.51 1.99 -0.24 -0.58 -0.02 -2.02 -0.55 -1.21 -1.28 -1.87 -2.06 -3.43 1.01 1.03 -0.09 0.53
2.75 1.72 -5.49 -4.65 -3.31 -3.43 -1.11 -2.03 -2.41 -3.08 -1.7 -4.28 0.34 0.09 -0.66 0.45
1.52 0.29 -6.62 -6.65 -5.07 -6.65 -2.2 -2.9 -1.31 -0.54 -3.14 -5.64 1.31 1.36 0.91 1.75
3.01 2.42 -8.51 -6.85 -7.57 -3.8 -6.35 -1.86 -1.41 -7.55 -6.67 -7.14 -1.87 -0.05 -0.96 -3.76
2.4 0.53 -2.56 -2.13 -1.83 -1.08 -0.4 -0.65 -0.68 -1.19 -0.88 -0.37 0.62 0.05 -0.69 0.22
2.23 1.15 -1.89 - - - - - -1.32 - - - 0.43 -0.71 2.69 -
3.34 1.86 -5.31 -4.54 -2.08 -1.5 -5.36 -2.38 -6.63 - -3.73 -3.9 -1.4 -1.91 -2.88 -1.25
2.64 2.28 0.09 0.07 -0.18 0.37 -1.53 -3.06 - - -3.66 -3.76 - - - -
3.26 2.47 - - - - - -0.19 - - - - - - - -
2.55 2.17 -4.95 - -0.75 -0.81 -2.17 -3.18 -0.88 -1.96 -0.22 -0.27 -0.47 -0.83 - -1.59
3.51 2.2 - - - - - - - - - - - - - -
2.05 0.19 - - - - -3.26 -2.65 -1.4 -2.84 - -5.5 1.26 0.84 1.6 1.44
1.43 0.9 -1.23 -2.81 - -2.19 - -1.12 - - - - 0.81 1.59 0.2 2.1
2.45 2.51 0.0 0.05 0.09 -1.27 -1.43 -2.32 -4.06 -5.1 -1.72 -1.51 - - - -
0.58 -0.39 - - - - - - - - - - 2.63 - 2.92 -
1.57 0.87 -0.18 -0.53 -0.41 -0.28 0.0 -0.97 -0.42 -0.02 -0.3 -0.16 -0.56 -0.62 -0.28 -0.06
1.57 3.06 -0.24 0.4 -0.11 -1.97 -4.61 0.38 - - - - - - - -
3.12 2.54 -0.21 -0.63 - - - - - - - - - - - -
2.22 1.8 -0.67 -0.39 -4.35 -2.71 -3.15 -1.73 -2.58 -1.68 -3.23 -2.92 -0.25 0.42 0.41 0.7
3.18 2.65 - - - - - -5.28 - - - - - - -0.74 -
1.99 1.46 -9.14 -7.81 -6.7 -6.59 -5.57 -5.22 -0.96 -1.31 -5.47 -6.25 0.53 1.37 1.57 0.34
0.91 -0.05 -3.02 -2.47 -1.83 -1.36 -2.61 -1.53 -0.94 -1.09 -1.44 -1.88 1.69 1.55 0.45 1.34
1.54 1.03 - - - - -5.51 -2.51 - - -4.18 -3.87 1.96 1.51 0.55 1.34
2.26 0.67 - -0.69 - -1.39 -1.44 -3.51 - - - -3.08 1.85 1.22 -0.17 0.31
3.01 1.45 -1.87 -1.86 -2.48 -2.64 - -4.53 - -3.55 0.18 -1.04 0.31 - -1.3 -0.08
1.32 0.62 - - - - - -3.82 - - - - 1.75 -1.93 0.14 2.84
1.56 1.07 -1.38 -0.83 -0.82 -1.11 -0.52 -0.61 -0.21 -0.69 -0.87 -0.49 0.43 0.21 -0.16 0.56
1.98 0.04 -5.87 - -3.41 - -4.54 -2.32 - -3.24 - -5.31 1.67 0.57 0.83 2.04
1.72 0.58 -0.04 0.23 -0.58 -0.35 -0.23 -0.67 0.01 0.04 -0.0 -0.18 -0.88 -0.92 -0.55 -1.08
1.56 0.84 -2.04 - - -4.87 -3.93 -5.51 -3.25 -2.61 -4.16 -1.94 0.87 2.92 -0.37 -3.06
1.08 0.1 -0.93 - - - - -3.65 - - - - 1.68 1.87 - 2.42
2.98 0.72 - - -1.12 -1.7 0.33 -2.32 - -2.62 -1.58 - -0.34 0.15 -0.36 0.12
3.39 2.26 - - - - - -0.55 - - - - - - - -
3.39 2.47 - - - - - - - - - - - - - -
2.7 2.39 0.51 -0.1 - - - - - - - - -3.1 -3.2 0.68 -3.23
3.54 2.01 - - - -2.32 - -3.12 -4.71 - - - - - - -
2.03 0.91 0.71 - - - - - - - - - - 1.5 - 2.48
3.03 2.74 -4.14 -4.05 -6.68 -4.51 -2.59 -1.33 - - -5.12 -2.29 -4.48 -4.99 -4.5 -3.43
1.87 0.87 - -6.86 -4.48 -4.91 -5.06 -6.67 -6.62 -3.75 -5.53 -5.63 1.88 1.49 -0.2 1.53
2.34 1.24 - - - - -4.6 -1.26 -3.36 -4.3 - - 0.79 0.93 0.96 1.25
1.52 1.06 -2.04 -1.71 -1.76 -1.24 -1.01 -1.91 -0.97 -0.52 -0.72 -0.95 0.73 0.37 0.43 1.25
3.02 2.08 0.02 0.19 -0.38 -0.39 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.