Heatmap: Cluster_289 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G062066.1	-	-	2.13	1.74	1.92	0.79	-	-	0.43	-	0.52	-	-	-	-	-
Sobic.001G097300.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G100300.1	-	-	2.82	3.16	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G115600.1	-	-	2.53	2.28	2.06	-	0.27	-	-	-	-	-	-	-	-	-
Sobic.001G154450.1	-	-	-	-	-	-	-	-	-	-	-	-	3.18	0.5	-	2.47
Sobic.001G212701.1	-	-	-	-	-	-	-7.28	-9.27	-	-	-	-	2.41	2.18	1.53	1.7
Sobic.001G273650.1	-	-	1.73	-	-0.16	-	0.05	-1.96	-	0.4	-	-	1.63	-	2.6	-
Sobic.001G443850.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.001G496000.1	-0.95	-0.71	1.35	2.05	0.71	-0.77	-0.09	-0.87	-1.17	-1.11	-2.07	-1.18	-	0.4	-	0.63
Sobic.002G059100.2	-	-	2.82	3.16	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G076350.1	-3.62	-0.58	1.8	0.55	-0.66	-0.01	-1.88	-	-2.2	-	-2.11	-0.21	1.96	0.24	-	1.02
Sobic.002G115400.1	-2.15	-	-	-	-	-	-0.33	-0.76	-	-	-	-	-	3.03	2.64	-
Sobic.002G199200.1	-	-0.66	1.9	1.24	-	-	-0.77	-	-	-	0.58	2.47	-	0.72	-	-
Sobic.002G208850.1	-	-	2.82	3.16	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G216801.1	0.73	-2.32	2.8	1.88	-1.43	0.57	-	-1.37	-	-	-	-	-	-	-	0.34
Sobic.002G277000.1	-0.77	1.15	1.45	1.56	0.53	0.88	-0.9	-	-0.55	-0.5	-0.44	-	-	0.65	-	-
Sobic.002G289200.1	-	-	-0.18	0.45	-0.03	-	-	-	-	-	-	-	-	-	3.68	-
Sobic.002G331400.1	-	1.31	-	-	-	-	-	-	-	-	-	-	-	-	3.76	-
Sobic.002G339250.1	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G347850.1	-	-	-	3.17	-	2.8	-	-	-	-	-	-	-	-	-	-
Sobic.002G367000.1	-2.27	1.29	1.55	1.7	0.68	1.69	-	-3.11	0.14	-0.81	-	-0.88	-	-	-	-
Sobic.003G014832.1	1.3	-	0.03	-0.37	1.16	0.91	1.04	-0.42	-	-	-0.62	-0.73	-	1.11	-	0.5
Sobic.003G018400.1	-1.25	-	1.72	1.66	2.41	-	-	-	0.35	-	-	1.34	-	-	-	-
Sobic.003G066000.1	-	-2.28	-	0.26	0.46	0.3	0.66	0.79	0.51	-1.02	-	-1.09	1.83	0.73	-	0.12
Sobic.003G116400.1	-0.0	-	2.96	2.44	-	-	-	0.84	-	-	-	-	-	-	-	-
Sobic.003G189100.2	-0.1	-	-	-	-	-	0.64	-	-	-	-	0.31	-	-	3.62	-
Sobic.003G277550.1	-	-	2.66	3.22	-	-	-	-1.58	-	-	-	-	-	-	-	-
Sobic.003G301950.1	-	-3.91	-	-	-	-3.39	-	-3.01	-	-	-2.69	-	2.02	1.27	-	3.19
Sobic.003G373050.1	-	-	1.74	-0.74	-1.94	-1.11	-	-	-	-1.43	-	-	1.55	-1.11	2.57	0.73
Sobic.003G375400.1	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G072201.1	-	-	-	-	-	-	-	-	-	-	-	-	2.59	-0.18	0.57	2.93
Sobic.004G133201.1	-3.45	-	-1.67	-1.34	-	-	-	-	-	-	-	-	2.42	0.47	2.22	1.93
Sobic.004G139400.2	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G176550.1	-1.64	-	-0.82	-	-	-	-	-	-	-	-	-	2.09	1.58	-	2.97
Sobic.004G215300.1	-	-	1.11	0.85	-	0.48	-	-	-	-	-	-	-	-	3.41	-
Sobic.005G110478.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G145000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.005G145950.1	-	-	-	1.01	-	0.66	-	-	-	-	-	-	-	-	3.63	-
Sobic.005G170500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G203750.1	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G012000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.006G037050.1	-	-	2.62	1.36	-	-	-0.64	0.38	-	-	-	-	-	0.85	-	1.82
Sobic.006G042100.1	-	-	3.49	2.25	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G053601.1	-	-	-	-	2.61	-	-	-	-	-	-	-	-	3.3	-	-
Sobic.006G105500.1	-	-	1.16	-	-	-	-	-	-	-	-	0.72	-	-	3.05	1.95
Sobic.006G195600.1	-	-	-0.21	0.12	0.92	1.34	-	-	-	-	-	-	1.7	-	2.67	-
Sobic.006G210266.1	0.06	-0.6	1.68	1.22	0.54	1.38	0.77	-0.77	-0.06	-1.33	-0.26	-2.12	-	-	-	-
Sobic.008G082150.1	-	-	2.6	2.86	-	0.83	-	-	-0.16	-	-	-	-	-	-	-
Sobic.008G123700.2	-	-	1.31	2.74	1.62	0.05	0.16	-	-0.93	-	-0.83	-0.94	-	-	-	-
Sobic.008G191800.1	-	1.36	2.65	1.61	-0.92	-1.08	0.6	-3.71	-	-	-0.37	-0.47	-	-	-	-
Sobic.009G025750.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.45	2.35
Sobic.009G037500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0
Sobic.009G051400.1	-	-	2.28	2.03	2.82	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G111050.1	-1.99	-1.75	-	-	-1.05	-0.22	-	-	-	-0.55	-	1.38	0.73	0.63	-	2.93
Sobic.009G135400.1	-	-	-1.3	-1.54	-	-	-	-3.98	-	-	-	-	2.48	2.74	1.0	-0.1
Sobic.009G202501.1	-	-	0.75	1.11	-	-	-	-	-	-	-	-	-	-	3.6	-
Sobic.009G202600.1	-	-	-	-	-	-	-	-1.5	-	-	-	-	1.98	2.92	-0.05	1.66
Sobic.009G233000.1	-6.03	-	-	-	-	-	-	-	-	-	-	-	2.02	2.36	1.34	2.09
Sobic.009G260900.1	-	-	1.92	2.25	2.05	-	-	-	-	-	-	-	-	1.74	-	-
Sobic.010G021600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G024800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G142300.1	-	-	2.91	2.25	-	1.89	-	-	-	-	-	-	-	-	-	-
Sobic.010G214950.1	-	-	-	-	-	-	-	-	-	-	-	1.05	-	-	-	3.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.