1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_307 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.94 1.55 -0.28 -0.88 0.65 0.71 - - 0.87 0.92 1.42 0.66 - - - -
0.8 1.68 -0.99 - -1.87 -2.01 - - 1.08 -0.32 1.72 0.61 - - 0.89 -1.21
0.49 -0.1 -1.55 -2.8 -1.24 -0.24 -0.12 -1.92 -1.04 -1.25 0.06 0.04 1.21 1.06 0.85 0.61
0.49 0.79 -3.85 -4.45 -5.52 0.09 -1.96 -0.27 0.53 0.14 1.39 0.66 0.55 -1.03 -5.35 0.9
0.78 0.3 -0.86 -1.0 -0.04 0.08 -0.02 -0.36 0.0 -0.48 0.72 0.26 -0.09 -0.22 -0.36 0.09
0.11 -1.7 -2.14 -1.17 -2.16 0.43 -0.6 -0.61 -1.73 -1.57 0.08 0.38 1.31 0.72 0.82 1.12
0.72 0.3 -1.84 -1.51 -0.24 -0.83 0.21 -1.32 0.05 -0.14 0.53 0.02 0.66 0.34 0.34 0.0
0.99 1.01 -1.14 -1.15 -1.04 -1.71 -0.13 -2.61 0.13 -0.3 1.33 0.42 -0.25 -0.25 -0.15 -0.18
1.43 0.81 -0.13 -0.05 -0.15 -0.36 -0.17 -1.33 -0.76 -0.58 0.31 0.27 -0.45 -0.35 -0.46 -0.41
0.48 0.49 -0.79 -0.38 0.15 0.03 0.27 -0.38 0.14 -0.21 0.86 0.33 -0.41 -0.92 -1.23 0.02
0.59 0.85 -0.33 -0.81 -0.7 0.03 -0.56 -1.06 -0.73 -1.91 0.37 -0.27 0.44 -1.1 0.89 0.92
-0.05 1.36 -1.84 -1.68 -0.77 -0.63 -1.09 -0.84 -0.04 -1.74 0.85 0.49 0.11 0.03 -0.48 1.22
1.31 0.64 -2.45 -2.57 -0.8 -0.46 -1.3 -1.68 -0.81 -1.4 0.99 -0.13 0.83 0.31 0.01 0.79
1.2 1.36 -0.47 0.32 0.5 0.4 -0.23 -0.95 -1.07 -0.78 0.33 0.1 -1.19 -1.68 -2.08 -0.52
0.56 0.76 -0.5 -1.15 -0.03 0.05 -0.35 -1.56 -0.52 -0.74 0.05 -0.14 0.66 0.34 0.28 0.31
0.72 0.63 -0.87 -0.44 -0.49 -0.02 -0.46 -1.71 -1.39 -0.67 0.45 -0.01 0.47 0.33 0.56 0.38
0.84 0.53 -1.05 -0.74 0.14 0.23 -0.11 -0.51 -0.39 -0.94 0.59 0.65 -0.0 -0.53 -0.72 0.18
0.1 -0.02 -1.38 -2.23 -1.1 -0.77 -0.2 -1.11 -1.38 -0.35 0.04 0.05 0.9 0.81 1.03 1.05
-0.14 0.71 -1.2 -0.82 -0.4 -0.26 0.34 -0.04 0.4 -0.35 1.15 0.49 -0.49 -0.48 -1.18 0.04
0.67 -0.26 -1.88 -1.35 -1.5 -1.85 -0.42 -2.15 -0.68 -1.29 0.37 -0.07 1.41 0.95 -0.17 1.35
0.92 0.15 -1.5 -0.64 -0.53 0.44 0.06 0.11 -2.8 -2.38 0.95 0.9 -0.12 -0.05 -0.7 0.26
-0.49 1.21 -2.17 -0.94 -1.37 -0.25 -0.37 -0.66 0.26 -0.59 1.04 0.9 -0.22 0.06 -1.05 0.5
0.28 0.75 -0.79 -1.5 -0.69 -0.38 -1.04 -1.81 -0.42 -0.75 0.52 0.42 0.77 0.68 0.08 0.61
0.22 -0.03 -1.03 -1.85 -1.02 -0.4 -0.4 -0.73 -0.6 -0.37 0.13 -0.03 0.94 0.66 -0.11 1.35
1.14 0.65 -0.96 -1.95 -0.52 -0.6 -1.81 -1.81 -0.65 -0.89 0.81 0.04 0.77 0.5 0.46 0.1
-0.07 -0.1 -0.6 -0.33 -0.06 -0.83 -0.43 -0.85 -0.57 -0.96 0.41 0.02 0.94 0.51 -0.06 1.01
0.54 1.62 -4.3 - - - -3.97 -4.63 -0.61 -0.12 1.57 0.66 -0.27 0.43 0.47 0.72
1.34 1.25 -0.74 -0.94 0.02 0.15 -8.52 -6.51 0.79 0.32 1.45 1.08 - - - -
1.55 2.02 -4.29 -3.07 -3.5 -1.04 -2.91 -4.35 0.77 0.19 1.38 -0.0 -1.09 -1.47 -4.21 -0.4
0.34 -0.05 -1.26 -1.18 -0.23 -0.24 -0.67 -1.29 -1.72 -1.73 0.55 0.38 1.04 0.71 0.67 0.6
-0.09 0.71 -2.82 -4.81 -3.02 -0.93 -1.82 -1.64 -0.39 -1.05 0.89 0.07 0.76 0.8 0.91 1.34
0.37 0.18 -0.49 -0.38 0.23 -0.13 0.07 -0.9 -0.14 -0.53 0.87 0.97 -0.14 -0.33 -0.63 -0.52
0.74 0.72 -1.14 -1.56 -0.72 0.15 -0.64 -1.76 -2.68 -1.68 0.06 -0.54 1.22 0.56 0.07 1.13
0.6 0.62 -1.96 -1.77 -0.73 -0.39 -0.08 -0.78 -0.03 -0.27 0.49 0.02 0.72 0.22 -1.03 0.98
1.54 2.15 0.56 -0.96 - - - - 0.43 0.39 1.09 0.92 - - - -
1.43 0.57 -1.14 -0.6 -1.5 -0.39 -1.81 -2.37 - -2.29 0.65 -0.19 1.13 -0.32 0.52 1.01
1.81 -0.21 - - -1.44 - 0.35 -3.24 -0.95 - 1.14 1.62 - -0.75 - 1.81
1.36 1.51 -0.49 -0.42 -0.17 0.06 -0.27 -2.03 -2.94 -2.89 0.45 0.92 -0.89 -0.19 -0.53 -1.0
-0.37 0.66 -1.15 -2.62 -3.24 -1.18 -4.04 -3.91 -0.13 -0.74 0.71 -0.07 0.66 1.32 0.25 1.59
0.81 0.49 -1.39 -1.24 -0.61 -0.18 0.19 -0.78 0.22 -0.27 0.56 0.29 -0.04 0.23 -0.04 -0.04
0.69 1.06 0.02 -0.3 0.29 0.2 -0.25 -0.92 -0.29 -0.32 -0.1 0.48 -0.87 -1.1 -0.35 -0.02
0.67 0.47 -3.34 -3.08 -0.34 -1.49 0.39 -0.64 0.38 0.1 0.45 -0.09 0.82 0.38 -0.31 0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.